RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 RANBP17Q9H2T7 1088 aaKnown RBP4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 TLR8Q9NR97 1041 aaKnown RBP4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 THAP1Q9NVV9 213 aa4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 PPP1R14DQ9NXH3 145 aa4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 CD207Q9UJ71 328 aa4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 ZNF112Q9UJU3 913 aa4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 FBXO4Q9UKT5 387 aa4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 LYVE1Q9Y5Y7 322 aa4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 RUSC2Q8N2Y8 1516 aa4.74□□□□□ -1.65
HMGB1P48-201ENST00000446155 KIR2DS5A0A0G2JLQ3 304 aa4.74□□□□□ -1.65
HMGB1P48-201ENST00000446155 NPIPB15A6NHN6 443 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P48-201ENST00000446155 KIR2DS3K7RE56 304 aa4.74□□□□□ -1.65
HMGB1P48-201ENST00000446155 OVOL3O00110 214 aa4.74□□□□□ -1.65
HMGB1P48-201ENST00000446155 TLX3O43711 291 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P48-201ENST00000446155 DHX16O60231 1041 aaKnown RBP4.74□□□□□ -1.65
HMGB1P48-201ENST00000446155 ERAL1O75616 437 aaKnown RBP4.74□□□□□ -1.65
HMGB1P48-201ENST00000446155 TOP3BO95985 862 aaKnown RBP4.74□□□□□ -1.65
HMGB1P48-201ENST00000446155 TGFB3P10600 412 aa4.74□□□□□ -1.65
HMGB1P48-201ENST00000446155 PRKCHP24723 683 aa4.74□□□□□ -1.65
HMGB1P48-201ENST00000446155 GPD2P43304 727 aa4.74□□□□□ -1.65
HMGB1P48-201ENST00000446155 MVDP53602 400 aa4.74□□□□□ -1.65
HMGB1P48-201ENST00000446155 ID2Q02363 134 aa4.74□□□□□ -1.65
HMGB1P48-201ENST00000446155 STK4Q13043 487 aa4.74□□□□□ -1.65
HMGB1P48-201ENST00000446155 STIM1Q13586 685 aa4.74□□□□□ -1.65
HMGB1P48-201ENST00000446155 SRSF7Q16629 238 aaKnown RBP eCLIP4.74□□□□□ -1.65
HMGB1P48-201ENST00000446155 MIDNQ504T8 468 aa4.74□□□□□ -1.65
HMGB1P48-201ENST00000446155 C10orf76Q5T2E6 689 aa4.74□□□□□ -1.65
HMGB1P48-201ENST00000446155 C10orf25Q5T742 122 aa4.74□□□□□ -1.65
HMGB1P48-201ENST00000446155 NAA16Q6N069 864 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P48-201ENST00000446155 SLC30A9Q6PML9 568 aa4.74□□□□□ -1.65
HMGB1P48-201ENST00000446155 IKBIPQ70UQ0 350 aa4.74□□□□□ -1.65
HMGB1P48-201ENST00000446155 RNF144BQ7Z419 303 aa4.74□□□□□ -1.65
HMGB1P48-201ENST00000446155 GALNT7Q86SF2 657 aa4.74□□□□□ -1.65
HMGB1P48-201ENST00000446155 CNGA4Q8IV77 575 aa4.74□□□□□ -1.65
HMGB1P48-201ENST00000446155 TAGAPQ8N103 731 aa4.74□□□□□ -1.65
HMGB1P48-201ENST00000446155 VOPP1Q96AW1 172 aa4.74□□□□□ -1.65
HMGB1P48-201ENST00000446155 CLMNQ96JQ2 1002 aa4.74□□□□□ -1.65
HMGB1P48-201ENST00000446155 SCNM1Q9BWG6 230 aa4.74□□□□□ -1.65
HMGB1P48-201ENST00000446155 SIL1Q9H173 461 aa4.74□□□□□ -1.65
HMGB1P48-201ENST00000446155 Q9N2J8 555 aa4.74□□□□□ -1.65
HMGB1P48-201ENST00000446155 PAPOLBQ9NRJ5 636 aaKnown RBP4.74□□□□□ -1.65
HMGB1P48-201ENST00000446155 TMEM184CQ9NVA4 438 aa4.74□□□□□ -1.65
HMGB1P48-201ENST00000446155 HCFC1R1Q9NWW0 138 aa4.74□□□□□ -1.65
HMGB1P48-201ENST00000446155 SLC25A10Q9UBX3 287 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P48-201ENST00000446155 CHORDC1Q9UHD1 332 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P48-201ENST00000446155 AGO2Q9UKV8 859 aaKnown RBP4.74□□□□□ -1.65
HMGB1P48-201ENST00000446155 SUFUQ9UMX1 484 aa4.74□□□□□ -1.65
HMGB1P48-201ENST00000446155 ZNF335Q9H4Z2 1342 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 CXorf65A6NEN9 183 aa4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 DNAJC9-AS1A6NH13 148 aa4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 F8W810 466 aa4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 ADAM10O14672 748 aa4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 TNFSF14O43557 240 aa4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 METTL18O95568 372 aa4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 HSP90AB1P08238 724 aaKnown RBP4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 CALRP27797 417 aaKnown RBP4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 TYK2P29597 1187 aa4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 BSGP35613 385 aa4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 PSMB10P40306 273 aa4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 CPA2P48052 419 aa4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 PLIN5Q00G26 463 aa4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 ZNF91Q05481 1191 aa4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 LRMPQ12912 555 aa4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 TRIP6Q15654 476 aaKnown RBP4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 CCDC92Q53HC0 331 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 ARL13AQ5H913 290 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 GPR139Q6DWJ6 353 aa4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 KDELC2Q7Z4H8 507 aa4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 C1QL2Q7Z5L3 287 aa4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 ZSCAN30Q86W11 494 aa4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 CNPY4Q8N129 248 aa4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 CNTROBQ8N137 903 aa4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 C17orf53Q8N3J3 647 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 CHCHD4Q8N4Q1 142 aa4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 ZNF713Q8N859 430 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 KCNJ9Q92806 393 aa4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 MSI2Q96DH6 328 aaKnown RBP4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 ELP4Q96EB1 424 aa4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 KIF1BPQ96EK5 621 aa4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 SPATA17Q96L03 361 aa4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 NR1H4Q96RI1 486 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 C1QTNF7Q9BXJ2 289 aa4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 FTOQ9C0B1 505 aaKnown RBP eCLIP4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 OR10A4Q9H209 315 aa4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 MROH8Q9H579 483 aa4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 ZWILCHQ9H900 591 aa4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 SPAG4Q9NPE6 437 aa4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 SEMA4BQ9NPR2 832 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 NRIP3Q9NQ35 241 aa4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 CCDC177Q9NQR7 707 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 TMEM45AQ9NWC5 275 aa4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 BEX4Q9NWD9 120 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 ARL15Q9NXU5 204 aa4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 ZNF70Q9UC06 446 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 SARDHQ9UL12 918 aa4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 ZMYM2Q9UBW7 1377 aa4.73□□□□□ -1.65
HMGB1P48-201ENST00000446155 SH2D7A6NKC9 451 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 NEURL1O76050 574 aa4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 SPARCP09486 303 aa4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 CYP4B1P13584 511 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms