RNA–Protein interactions for RNA: ENST00000444677.5

GARNL3-208, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-208	ENST00000444677	FAM71B	Q8TC56	605 aa		13.75	□□□□□ -0.21
GARNL3-208	ENST00000444677	IL21R	Q9HBE5	538 aa		13.75	□□□□□ -0.21
GARNL3-208	ENST00000444677	UBA2	Q9UBT2	640 aa	Predicted RBP	13.75	□□□□□ -0.21
GARNL3-208	ENST00000444677	CA5B	Q9Y2D0	317 aa		13.75	□□□□□ -0.21
GARNL3-208	ENST00000444677	NYNRIN	Q9P2P1	1898 aa	Known RBP	13.75	□□□□□ -0.21
GARNL3-208	ENST00000444677	CXorf51A	A0A1B0GTR3	108 aa		13.74	□□□□□ -0.21
GARNL3-208	ENST00000444677	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	13.74	□□□□□ -0.21
GARNL3-208	ENST00000444677	SOWAHD	A6NJG2	315 aa		13.74	□□□□□ -0.21
GARNL3-208	ENST00000444677	SLC7A4	O43246	635 aa		13.74	□□□□□ -0.21
GARNL3-208	ENST00000444677	RNGTT	O60942	597 aa	Known RBP	13.74	□□□□□ -0.21
GARNL3-208	ENST00000444677	GJB3	O75712	270 aa		13.74	□□□□□ -0.21
GARNL3-208	ENST00000444677	UGT2B4	P06133	528 aa		13.74	□□□□□ -0.21
GARNL3-208	ENST00000444677	ITIH2	P19823	946 aa		13.74	□□□□□ -0.21
GARNL3-208	ENST00000444677	ABL2	P42684	1182 aa		13.74	□□□□□ -0.21
GARNL3-208	ENST00000444677	CCR5	P51681	352 aa		13.74	□□□□□ -0.21
GARNL3-208	ENST00000444677	ZNF135	P52742	658 aa	Predicted RBP	13.74	□□□□□ -0.21
GARNL3-208	ENST00000444677	GEMIN4	P57678	1058 aa	Known RBP	13.74	□□□□□ -0.21
GARNL3-208	ENST00000444677	SNRPD1	P62314	119 aa	Known RBP	13.74	□□□□□ -0.21
GARNL3-208	ENST00000444677	DPYSL3	Q14195	570 aa		13.74	□□□□□ -0.21
GARNL3-208	ENST00000444677	KIF19	Q2TAC6	998 aa		13.74	□□□□□ -0.21
GARNL3-208	ENST00000444677	INO80D	Q53TQ3	878 aa	Predicted RBP	13.74	□□□□□ -0.21
GARNL3-208	ENST00000444677	RABEPK	Q7Z6M1	372 aa		13.74	□□□□□ -0.21
GARNL3-208	ENST00000444677	PLPP6	Q8IY26	295 aa		13.74	□□□□□ -0.21
GARNL3-208	ENST00000444677	PIAS4	Q8N2W9	510 aa	Predicted RBP	13.74	□□□□□ -0.21
GARNL3-208	ENST00000444677	MINDY1	Q8N5J2	469 aa		13.74	□□□□□ -0.21
GARNL3-208	ENST00000444677	LRRN4	Q8WUT4	740 aa		13.74	□□□□□ -0.21
GARNL3-208	ENST00000444677	RAPGEF5	Q92565	580 aa		13.74	□□□□□ -0.21
GARNL3-208	ENST00000444677	NSMCE3	Q96MG7	304 aa		13.74	□□□□□ -0.21
GARNL3-208	ENST00000444677	KLHL32	Q96NJ5	620 aa		13.74	□□□□□ -0.21
GARNL3-208	ENST00000444677	HDAC8	Q9BY41	377 aa		13.74	□□□□□ -0.21
GARNL3-208	ENST00000444677	DYRK4	Q9NR20	520 aa		13.74	□□□□□ -0.21
GARNL3-208	ENST00000444677	IPO11	Q9UI26	975 aa	Known RBP	13.74	□□□□□ -0.21
GARNL3-208	ENST00000444677	ZFR2	Q9UPR6	939 aa	Known RBP	13.74	□□□□□ -0.21
GARNL3-208	ENST00000444677		A0A1W2PQU0	124 aa		13.73	□□□□□ -0.21
GARNL3-208	ENST00000444677	TTC24	A2A3L6	582 aa	Predicted RBP	13.73	□□□□□ -0.21
GARNL3-208	ENST00000444677	RCCD1	A6NED2	376 aa		13.73	□□□□□ -0.21
GARNL3-208	ENST00000444677	C16orf96	A6NNT2	1141 aa		13.73	□□□□□ -0.21
GARNL3-208	ENST00000444677	MUSK	O15146	869 aa		13.73	□□□□□ -0.21
GARNL3-208	ENST00000444677	BUB1B	O60566	1050 aa	Predicted RBP	13.73	□□□□□ -0.21
GARNL3-208	ENST00000444677	MTA2	O94776	668 aa		13.73	□□□□□ -0.21
GARNL3-208	ENST00000444677	MAP3K6	O95382	1288 aa		13.73	□□□□□ -0.21
GARNL3-208	ENST00000444677	POP4	O95707	220 aa	Known RBP	13.73	□□□□□ -0.21
GARNL3-208	ENST00000444677	ATXN3	P54252	364 aa	Predicted RBP	13.73	□□□□□ -0.21
GARNL3-208	ENST00000444677	LRRC73	Q5JTD7	316 aa		13.73	□□□□□ -0.21
GARNL3-208	ENST00000444677	PRAMEF14	Q5SWL7	426 aa		13.73	□□□□□ -0.21
GARNL3-208	ENST00000444677	TMCO3	Q6UWJ1	677 aa		13.73	□□□□□ -0.21
GARNL3-208	ENST00000444677	RAD9B	Q6WBX8	426 aa		13.73	□□□□□ -0.21
GARNL3-208	ENST00000444677	RHOT2	Q8IXI1	618 aa		13.73	□□□□□ -0.21
GARNL3-208	ENST00000444677	SPC24	Q8NBT2	197 aa		13.73	□□□□□ -0.21
GARNL3-208	ENST00000444677	KCTD6	Q8NC69	237 aa		13.73	□□□□□ -0.21
GARNL3-208	ENST00000444677	TSEN2	Q8NCE0	465 aa	Known RBP	13.73	□□□□□ -0.21
GARNL3-208	ENST00000444677	PCDH19	Q8TAB3	1148 aa		13.73	□□□□□ -0.21
GARNL3-208	ENST00000444677	CASKIN2	Q8WXE0	1202 aa		13.73	□□□□□ -0.21
GARNL3-208	ENST00000444677	RFFL	Q8WZ73	363 aa		13.73	□□□□□ -0.21
GARNL3-208	ENST00000444677	GDAP1L1	Q96MZ0	367 aa		13.73	□□□□□ -0.21
GARNL3-208	ENST00000444677	PANX2	Q96RD6	677 aa		13.73	□□□□□ -0.21
GARNL3-208	ENST00000444677	GOLPH3	Q9H4A6	298 aa		13.73	□□□□□ -0.21
GARNL3-208	ENST00000444677	SP110	Q9HB58	689 aa		13.73	□□□□□ -0.21
GARNL3-208	ENST00000444677	GGT7	Q9UJ14	662 aa		13.73	□□□□□ -0.21
GARNL3-208	ENST00000444677	ITM2B	Q9Y287	266 aa		13.73	□□□□□ -0.21
GARNL3-208	ENST00000444677	PCDHA13	Q9Y5I0	950 aa		13.73	□□□□□ -0.21
GARNL3-208	ENST00000444677	FADS3	Q9Y5Q0	445 aa		13.73	□□□□□ -0.21
GARNL3-208	ENST00000444677	SNX11	Q9Y5W9	270 aa		13.73	□□□□□ -0.21
GARNL3-208	ENST00000444677		A0A1W2PR77	199 aa		13.72	□□□□□ -0.21
GARNL3-208	ENST00000444677	GIPC1	O14908	333 aa		13.72	□□□□□ -0.21
GARNL3-208	ENST00000444677	SPINT1	O43278	529 aa		13.72	□□□□□ -0.21
GARNL3-208	ENST00000444677	LAT	O43561	262 aa		13.72	□□□□□ -0.21
GARNL3-208	ENST00000444677	PIGN	O95427	931 aa		13.72	□□□□□ -0.21
GARNL3-208	ENST00000444677	LCA5L	O95447	670 aa		13.72	□□□□□ -0.21
GARNL3-208	ENST00000444677	IGSF6	O95976	241 aa		13.72	□□□□□ -0.21
GARNL3-208	ENST00000444677	PEX11B	O96011	259 aa		13.72	□□□□□ -0.21
GARNL3-208	ENST00000444677	SYP	P08247	313 aa		13.72	□□□□□ -0.21
GARNL3-208	ENST00000444677	TNNT1	P13805	278 aa		13.72	□□□□□ -0.21
GARNL3-208	ENST00000444677	ADRB3	P13945	408 aa		13.72	□□□□□ -0.21
GARNL3-208	ENST00000444677	PRLR	P16471	622 aa		13.72	□□□□□ -0.21
GARNL3-208	ENST00000444677	FECH	P22830	423 aa		13.72	□□□□□ -0.21
GARNL3-208	ENST00000444677	KDELR1	P24390	212 aa		13.72	□□□□□ -0.21
GARNL3-208	ENST00000444677	ITGB7	P26010	798 aa		13.72	□□□□□ -0.21
GARNL3-208	ENST00000444677	MAN1A1	P33908	653 aa		13.72	□□□□□ -0.21
GARNL3-208	ENST00000444677	NEK3	P51956	506 aa		13.72	□□□□□ -0.21
GARNL3-208	ENST00000444677	IL10RB	Q08334	325 aa		13.72	□□□□□ -0.21
GARNL3-208	ENST00000444677	ANKRD20A8P	Q5CZ79	823 aa		13.72	□□□□□ -0.21
GARNL3-208	ENST00000444677	ZNF805	Q5CZA5	627 aa		13.72	□□□□□ -0.21
GARNL3-208	ENST00000444677	FAM182A	Q5T1J6	154 aa		13.72	□□□□□ -0.21
GARNL3-208	ENST00000444677	SEL1L3	Q68CR1	1132 aa		13.72	□□□□□ -0.21
GARNL3-208	ENST00000444677	NCBP2-AS2	Q69YL0	99 aa		13.72	□□□□□ -0.21
GARNL3-208	ENST00000444677	GDPD4	Q6W3E5	623 aa		13.72	□□□□□ -0.21
GARNL3-208	ENST00000444677	LZTR1	Q8N653	840 aa		13.72	□□□□□ -0.21
GARNL3-208	ENST00000444677	PQLC3	Q8N755	202 aa		13.72	□□□□□ -0.21
GARNL3-208	ENST00000444677	PPP1R16A	Q96I34	528 aa		13.72	□□□□□ -0.21
GARNL3-208	ENST00000444677	SERAC1	Q96JX3	654 aa		13.72	□□□□□ -0.21
GARNL3-208	ENST00000444677	MYOC	Q99972	504 aa		13.72	□□□□□ -0.21
GARNL3-208	ENST00000444677	CALN1	Q9BXU9	219 aa		13.72	□□□□□ -0.21
GARNL3-208	ENST00000444677	KDM4C	Q9H3R0	1056 aa		13.72	□□□□□ -0.21
GARNL3-208	ENST00000444677	FZD3	Q9NPG1	666 aa		13.72	□□□□□ -0.21
GARNL3-208	ENST00000444677	AASDHPPT	Q9NRN7	309 aa		13.72	□□□□□ -0.21
GARNL3-208	ENST00000444677	DONSON	Q9NYP3	566 aa		13.72	□□□□□ -0.21
GARNL3-208	ENST00000444677	INTU	Q9ULD6	942 aa		13.72	□□□□□ -0.21
GARNL3-208	ENST00000444677	ANKRD6	Q9Y2G4	727 aa		13.72	□□□□□ -0.21
GARNL3-208	ENST00000444677	REXO2	Q9Y3B8	237 aa	Known RBP	13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms