RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 PIGZQ86VD9 579 aa19.18■□□□□ 0.66
PMPCB-204ENST00000444457 MAPK15Q8TD08 544 aa19.18■□□□□ 0.66
PMPCB-204ENST00000444457 DNAJB3Q8WWF6 145 aa19.18■□□□□ 0.66
PMPCB-204ENST00000444457 NDRG1Q92597 394 aaKnown RBP19.18■□□□□ 0.66
PMPCB-204ENST00000444457 TNIP3Q96KP6 325 aa19.18■□□□□ 0.66
PMPCB-204ENST00000444457 OR52B2Q96RD2 323 aa19.18■□□□□ 0.66
PMPCB-204ENST00000444457 TMEM79Q9BSE2 394 aa19.18■□□□□ 0.66
PMPCB-204ENST00000444457 DNAI2Q9GZS0 605 aa19.18■□□□□ 0.66
PMPCB-204ENST00000444457 RNF39Q9H2S5 420 aa19.18■□□□□ 0.66
PMPCB-204ENST00000444457 COQ10BQ9H8M1 238 aa19.18■□□□□ 0.66
PMPCB-204ENST00000444457 FAM155AB1AL88 458 aaPredicted RBP19.18■□□□□ 0.66
PMPCB-204ENST00000444457 F5H423 210 aaPredicted RBP19.18■□□□□ 0.66
PMPCB-204ENST00000444457 PSMD12O00232 456 aaPredicted RBP19.18■□□□□ 0.66
PMPCB-204ENST00000444457 INHBBP09529 407 aa19.18■□□□□ 0.66
PMPCB-204ENST00000444457 NELFEP18615 380 aaKnown RBP19.18■□□□□ 0.66
PMPCB-204ENST00000444457 DPP6P42658 865 aa19.18■□□□□ 0.66
PMPCB-204ENST00000444457 RXRGP48443 463 aa19.18■□□□□ 0.66
PMPCB-204ENST00000444457 GTF2A2P52657 109 aa19.18■□□□□ 0.66
PMPCB-204ENST00000444457 SNX17Q15036 470 aa19.18■□□□□ 0.66
PMPCB-204ENST00000444457 SV2CQ496J9 727 aa19.18■□□□□ 0.66
PMPCB-204ENST00000444457 XKR4Q5GH76 650 aa19.18■□□□□ 0.66
PMPCB-204ENST00000444457 OTUD1Q5VV17 481 aaPredicted RBP19.18■□□□□ 0.66
PMPCB-204ENST00000444457 STEAP4Q687X5 459 aa19.18■□□□□ 0.66
PMPCB-204ENST00000444457 HACE1Q8IYU2 909 aa19.18■□□□□ 0.66
PMPCB-204ENST00000444457 ZNF781Q8N8C0 355 aa19.18■□□□□ 0.66
PMPCB-204ENST00000444457 B3GALNT2Q8NCR0 500 aa19.18■□□□□ 0.66
PMPCB-204ENST00000444457 DDHD1Q8NEL9 900 aa19.18■□□□□ 0.66
PMPCB-204ENST00000444457 DCUN1D5Q9BTE7 237 aa19.18■□□□□ 0.66
PMPCB-204ENST00000444457 ANKRD60Q9BZ19 345 aa19.18■□□□□ 0.66
PMPCB-204ENST00000444457 ZNF408Q9H9D4 720 aa19.18■□□□□ 0.66
PMPCB-204ENST00000444457 TCF7L2Q9NQB0 619 aa19.18■□□□□ 0.66
PMPCB-204ENST00000444457 FAM32AQ9Y421 112 aaKnown RBP19.18■□□□□ 0.66
PMPCB-204ENST00000444457 ZNF236Q9UL36 1845 aa19.17■□□□□ 0.66
PMPCB-204ENST00000444457 WDR27A2RRH5 827 aa19.17■□□□□ 0.66
PMPCB-204ENST00000444457 HUS1O60921 280 aa19.17■□□□□ 0.66
PMPCB-204ENST00000444457 DAB1O75553 588 aa19.17■□□□□ 0.66
PMPCB-204ENST00000444457 BAIAP3O94812 1187 aa19.17■□□□□ 0.66
PMPCB-204ENST00000444457 MLNP12872 115 aa19.17■□□□□ 0.66
PMPCB-204ENST00000444457 PLEKHH3Q7Z736 793 aa19.17■□□□□ 0.66
PMPCB-204ENST00000444457 OSTM1Q86WC4 334 aa19.17■□□□□ 0.66
PMPCB-204ENST00000444457 PSTKQ8IV42 348 aaKnown RBP19.17■□□□□ 0.66
PMPCB-204ENST00000444457 CENPSQ8N2Z9 138 aa19.17■□□□□ 0.66
PMPCB-204ENST00000444457 COLGALT1Q8NBJ5 622 aa19.17■□□□□ 0.66
PMPCB-204ENST00000444457 ADAMTS16Q8TE57 1224 aa19.17■□□□□ 0.66
PMPCB-204ENST00000444457 CHPT1Q8WUD6 406 aa19.17■□□□□ 0.66
PMPCB-204ENST00000444457 USP13Q92995 863 aaPredicted RBP19.17■□□□□ 0.66
PMPCB-204ENST00000444457 TSPYL2Q9H2G4 693 aaPredicted RBP19.17■□□□□ 0.66
PMPCB-204ENST00000444457 SLC22A2O15244 555 aa19.17■□□□□ 0.66
PMPCB-204ENST00000444457 C21orf59P57076 290 aa19.17■□□□□ 0.66
PMPCB-204ENST00000444457 ESRRGP62508 458 aa19.17■□□□□ 0.66
PMPCB-204ENST00000444457 PITX1P78337 314 aaPredicted RBP19.17■□□□□ 0.66
PMPCB-204ENST00000444457 DCAF6Q58WW2 860 aa19.17■□□□□ 0.66
PMPCB-204ENST00000444457 UBXN11Q5T124 520 aa19.17■□□□□ 0.66
PMPCB-204ENST00000444457 IL23RQ5VWK5 629 aa19.17■□□□□ 0.66
PMPCB-204ENST00000444457 SETD3Q86TU7 594 aaPredicted RBP19.17■□□□□ 0.66
PMPCB-204ENST00000444457 TBC1D15Q8TC07 691 aa19.17■□□□□ 0.66
PMPCB-204ENST00000444457 RNF139Q8WU17 664 aa19.17■□□□□ 0.66
PMPCB-204ENST00000444457 RCN3Q96D15 328 aa19.17■□□□□ 0.66
PMPCB-204ENST00000444457 TMEM216Q9P0N5 145 aa19.17■□□□□ 0.66
PMPCB-204ENST00000444457 TSC2P49815 1807 aa19.16■□□□□ 0.66
PMPCB-204ENST00000444457 K7EPI3 171 aa19.16■□□□□ 0.66
PMPCB-204ENST00000444457 CDH15P55291 814 aa19.16■□□□□ 0.66
PMPCB-204ENST00000444457 NIPAL1Q6NVV3 410 aa19.16■□□□□ 0.66
PMPCB-204ENST00000444457 C17orf50Q8WW18 174 aa19.16■□□□□ 0.66
PMPCB-204ENST00000444457 GPATCH1Q9BRR8 931 aaKnown RBP19.16■□□□□ 0.66
PMPCB-204ENST00000444457 DUSP16Q9BY84 665 aa19.16■□□□□ 0.66
PMPCB-204ENST00000444457 WDR41Q9HAD4 459 aa19.16■□□□□ 0.66
PMPCB-204ENST00000444457 PRDM16Q9HAZ2 1276 aa19.16■□□□□ 0.66
PMPCB-204ENST00000444457 XPNPEP3Q9NQH7 507 aa19.16■□□□□ 0.66
PMPCB-204ENST00000444457 TMPRSS4Q9NRS4 437 aa19.16■□□□□ 0.66
PMPCB-204ENST00000444457 CLASP2O75122 1294 aaKnown RBP19.15■□□□□ 0.66
PMPCB-204ENST00000444457 ALDH1A2O94788 518 aa19.15■□□□□ 0.66
PMPCB-204ENST00000444457 WARSP23381 471 aaKnown RBP19.15■□□□□ 0.66
PMPCB-204ENST00000444457 GABRB3P28472 473 aa19.15■□□□□ 0.66
PMPCB-204ENST00000444457 LILRA4P59901 499 aa19.15■□□□□ 0.66
PMPCB-204ENST00000444457 CRADDP78560 199 aa19.15■□□□□ 0.66
PMPCB-204ENST00000444457 NIPAL4Q0D2K0 466 aa19.15■□□□□ 0.66
PMPCB-204ENST00000444457 RFTN1Q14699 578 aaPredicted RBP19.15■□□□□ 0.66
PMPCB-204ENST00000444457 NANOGP8Q6NSW7 305 aa19.15■□□□□ 0.66
PMPCB-204ENST00000444457 CASC4Q6P4E1 433 aa19.15■□□□□ 0.66
PMPCB-204ENST00000444457 UNC5BQ8IZJ1 945 aa19.15■□□□□ 0.66
PMPCB-204ENST00000444457 RNF148Q8N7C7 305 aa19.15■□□□□ 0.66
PMPCB-204ENST00000444457 NETO2Q8NC67 525 aa19.15■□□□□ 0.66
PMPCB-204ENST00000444457 TSPAN18Q96SJ8 248 aa19.15■□□□□ 0.66
PMPCB-204ENST00000444457 DOK1Q99704 481 aa19.15■□□□□ 0.66
PMPCB-204ENST00000444457 EIF2B3Q9NR50 452 aaKnown RBP19.15■□□□□ 0.66
PMPCB-204ENST00000444457 A0A087WXM4 84 aa19.15■□□□□ 0.66
PMPCB-204ENST00000444457 RNF103O00237 685 aa19.15■□□□□ 0.66
PMPCB-204ENST00000444457 CLDN5O00501 218 aa19.15■□□□□ 0.66
PMPCB-204ENST00000444457 CFLARO15519 480 aa19.15■□□□□ 0.66
PMPCB-204ENST00000444457 ZBTB11O95625 1053 aaPredicted RBP19.15■□□□□ 0.66
PMPCB-204ENST00000444457 MX2P20592 715 aa19.15■□□□□ 0.66
PMPCB-204ENST00000444457 ATXN3P54252 364 aaPredicted RBP19.15■□□□□ 0.66
PMPCB-204ENST00000444457 ADAM17P78536 824 aa19.15■□□□□ 0.66
PMPCB-204ENST00000444457 MFSD10Q14728 455 aa19.15■□□□□ 0.66
PMPCB-204ENST00000444457 BNIPLQ7Z465 357 aa19.15■□□□□ 0.66
PMPCB-204ENST00000444457 NT5C3BQ969T7 300 aa19.15■□□□□ 0.66
PMPCB-204ENST00000444457 ATP6V1E2Q96A05 226 aa19.15■□□□□ 0.66
PMPCB-204ENST00000444457 THAP11Q96EK4 314 aa19.15■□□□□ 0.66
PMPCB-204ENST00000444457 P2RY11Q96G91 374 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms