RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 ZNF697Q5TEC3 545 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 SH3BP5LQ7L8J4 393 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 FAM228AQ86W67 206 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 CLIP3Q96DZ5 547 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 MAML3Q96JK9 1138 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 PDLIM2Q96JY6 352 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 C11orf84Q9BUA3 381 aaPredicted RBP11.34□□□□□ -0.59
FN1-211ENST00000443816 USP20Q9Y2K6 914 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 ISM1B1AKI9 464 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 SPATA31D3P0C874 917 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 PSMC3P17980 439 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 C4BPBP20851 252 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 PARP15Q460N3 678 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 SPATA31D4Q6ZUB0 917 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 FAM126BQ8IXS8 530 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 CERS5Q8N5B7 392 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 ETNK2Q9NVF9 386 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 GEMIN8Q9NWZ8 242 aaKnown RBP11.34□□□□□ -0.59
FN1-211ENST00000443816 OR10H1Q9Y4A9 318 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 C15orf38-AP3S2A0A0A6YYH1 394 aa11.33□□□□□ -0.59
FN1-211ENST00000443816 A0A0G2JLL6 359 aaPredicted RBP11.33□□□□□ -0.59
FN1-211ENST00000443816 CLDN5O00501 218 aa11.33□□□□□ -0.59
FN1-211ENST00000443816 CDKAL1Q5VV42 579 aa11.33□□□□□ -0.59
FN1-211ENST00000443816 PACS1Q6VY07 963 aa11.33□□□□□ -0.59
FN1-211ENST00000443816 ARPINQ7Z6K5 226 aa11.33□□□□□ -0.59
FN1-211ENST00000443816 PRRT2Q7Z6L0 340 aaPredicted RBP11.33□□□□□ -0.59
FN1-211ENST00000443816 KRT77Q7Z794 578 aa11.33□□□□□ -0.59
FN1-211ENST00000443816 PIF1Q9H611 641 aa11.33□□□□□ -0.59
FN1-211ENST00000443816 CLIC5Q9NZA1 410 aa11.33□□□□□ -0.59
FN1-211ENST00000443816 AGO1Q9UL18 857 aaKnown RBP11.33□□□□□ -0.59
FN1-211ENST00000443816 FRG1Q14331 258 aaKnown RBP11.33□□□□□ -0.6
FN1-211ENST00000443816 CDC73Q6P1J9 531 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 C11orf88Q6PI97 169 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 FAM124AQ86V42 546 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 RASAL3Q86YV0 1011 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 CNPPD1Q9BV87 410 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 COQ6Q9Y2Z9 468 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 AP4S1Q9Y587 144 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 BCL9LQ86UU0 1499 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 LGR5O75473 907 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 CLDN11O75508 207 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 ERFP50548 548 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 RALGDSQ12967 914 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 NEPROQ6NW34 567 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 SRLQ86TD4 932 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 IFNLR1Q8IU57 520 aaPredicted RBP11.33□□□□□ -0.6
FN1-211ENST00000443816 CCDC185Q8N715 623 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 WDR36Q8NI36 951 aaKnown RBP11.33□□□□□ -0.6
FN1-211ENST00000443816 RERGLQ9H628 205 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 INVSQ9Y283 1065 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 KLHL41O60662 606 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 PTPN2P17706 415 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 ST13P50502 369 aaKnown RBP11.33□□□□□ -0.6
FN1-211ENST00000443816 CLCN5P51795 746 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 MRPS5P82675 430 aaKnown RBP11.33□□□□□ -0.6
FN1-211ENST00000443816 KYQ8NBH2 561 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 SEMA3CQ99985 751 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 PADI3Q9ULW8 664 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 ZNF541Q9H0D2 1346 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 LRRC72A6NJI9 287 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 GPD2P43304 727 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 SLC25A52Q3SY17 297 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 CEP78Q5JTW2 689 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 PIGZQ86VD9 579 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 EPHX4Q8IUS5 362 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 SLC9A9Q8IVB4 645 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 C2orf15Q8WU43 125 aaKnown RBP11.33□□□□□ -0.6
FN1-211ENST00000443816 FIG4Q92562 907 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 CD101Q93033 1021 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 MTERF3Q96E29 417 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 NXF3Q9H4D5 531 aaKnown RBP11.33□□□□□ -0.6
FN1-211ENST00000443816 TBC1D23Q9NUY8 699 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 ABI3Q9P2A4 366 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 CFAP97Q9P2B7 532 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 A0A0B4J269 797 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 TREHO43280 583 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 FGF1P05230 155 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 MAMLD1Q13495 774 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 DPYSL3Q14195 570 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 PFKFB4Q16877 469 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 TCEAL5Q5H9L2 206 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 FGD3Q5JSP0 725 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 PAPD7Q5XG87 772 aaKnown RBP11.33□□□□□ -0.6
FN1-211ENST00000443816 OR10G6Q8NH81 332 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 NSMCE2Q96MF7 247 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 SMAD5Q99717 465 aaKnown RBP11.33□□□□□ -0.6
FN1-211ENST00000443816 FAM124BQ9H5Z6 455 aaPredicted RBP11.33□□□□□ -0.6
FN1-211ENST00000443816 ERVW-1Q9UQF0 538 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 SHPRHQ149N8 1683 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 TRIM13O60858 407 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 ABL2P42684 1182 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 IRF8Q02556 426 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 ADAMTSL2Q86TH1 951 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 FAM20CQ8IXL6 584 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 APOL4Q9BPW4 351 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 KCTD5Q9NXV2 234 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 STMN3Q9NZ72 180 aa11.33□□□□□ -0.6
FN1-211ENST00000443816 H3BN98 237 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 KRT75O95678 551 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 CYP3A5P20815 502 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms