RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 STMN3Q9NZ72 180 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.07□□□□□ -1.67e-7■■■■□ 20.5
HERC1-201ENST00000443617 MTF2Q9Y483 593 aaPredicted RBP5.07□□□□□ -1.6
HERC1-201ENST00000443617 ITSN1Q15811 1721 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 SLC22A1O15245 554 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 SFNP31947 248 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 TUFMP49411 452 aaKnown RBP5.07□□□□□ -1.6
HERC1-201ENST00000443617 HLCSP50747 726 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 GRAPQ13588 217 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 GRAPLQ8TC17 118 aaPredicted RBP5.07□□□□□ -1.6
HERC1-201ENST00000443617 PTCD2Q8WV60 388 aaKnown RBP5.07□□□□□ -1.6
HERC1-201ENST00000443617 POLE4Q9NR33 117 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 PNMA8BQ9ULN7 279 aaPredicted RBP5.07□□□□□ -1.6
HERC1-201ENST00000443617 H0YAE9 185 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 ZNF536O15090 1300 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 SERPINI2O75830 405 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 CLIC3O95833 236 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 CCNE2O96020 404 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 IL12RB1P42701 662 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 MAGEA6P43360 314 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 OR2B6P58173 313 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 SKIV2LQ15477 1246 aaKnown RBP5.07□□□□□ -1.6
HERC1-201ENST00000443617 SPATS1Q496A3 300 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 COLEC12Q5KU26 742 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 TUBA3EQ6PEY2 450 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 GOLM1Q8NBJ4 401 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 MUC13Q9H3R2 512 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 PLEKHA5Q9HAU0 1116 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 IARS2Q9NSE4 1012 aaKnown RBP5.07□□□□□ -1.6
HERC1-201ENST00000443617 ACOT9Q9Y305 439 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 GAKO14976 1311 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 SLC15A5A6NIM6 579 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 LSM3P62310 102 aaKnown RBP5.07□□□□□ -1.6
HERC1-201ENST00000443617 C6orf10Q5SRN2 563 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 CMC1Q7Z7K0 106 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 TMEM174Q8WUU8 243 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 VPS39Q96JC1 886 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 NFIBO00712 420 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 PSMB9P28065 219 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 SEPHS1P49903 392 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 CHRNB3Q05901 458 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 KIZQ2M2Z5 673 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 HEATR6Q6AI08 1181 aaKnown RBP5.07□□□□□ -1.6
HERC1-201ENST00000443617 FAAH2Q6GMR7 532 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 MAP4K3Q8IVH8 894 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 ASCC1Q8N9N2 400 aaKnown RBP5.07□□□□□ -1.6
HERC1-201ENST00000443617 OR13F1Q8NGS4 319 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 HTR3CQ8WXA8 447 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 RMDN1Q96DB5 314 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 DGCR6LQ9BY27 220 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 UBA2Q9UBT2 640 aaPredicted RBP5.07□□□□□ -1.6
HERC1-201ENST00000443617 CCDC154A6NI56 674 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 GUCY1B2O75343 617 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 VPS4BO75351 444 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 CRYZL1O95825 349 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 ASNSP08243 561 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 TPSB2P20231 275 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 GPD1P21695 349 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 TPSAB1Q15661 275 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 FAM98BQ52LJ0 330 aaKnown RBP5.07□□□□□ -1.6
HERC1-201ENST00000443617 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.07□□□□□ -1.6
HERC1-201ENST00000443617 STEAP4Q687X5 459 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 OR6Q1Q8NGQ2 317 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 DCPSQ96C86 337 aaKnown RBP5.07□□□□□ -1.6
HERC1-201ENST00000443617 CACNA2D2Q9NY47 1150 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 NOX1Q9Y5S8 564 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 TCRBV3S1A0A5B6 114 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 RNF103O00237 685 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 ARL4AP40617 200 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 NRLP54845 237 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 STILQ15468 1287 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 UGP2Q16851 508 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 ARMC4Q5T2S8 1044 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 CCSAPQ6IQ19 270 aaPredicted RBP5.07□□□□□ -1.6
HERC1-201ENST00000443617 SVOPQ8N4V2 548 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 MCRS1Q96EZ8 462 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 SEPHS2Q99611 448 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 LHX5Q9H2C1 402 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 EMCNQ9ULC0 261 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 JUNBP17275 347 aaPredicted RBP5.07□□□□□ -1.6
HERC1-201ENST00000443617 ATP6V1B2P21281 511 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 AVPR1AP37288 418 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 RARRES1P49788 294 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 DAB2P98082 770 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 HABP4Q5JVS0 413 aaKnown RBP5.07□□□□□ -1.6
HERC1-201ENST00000443617 TWF2Q6IBS0 349 aaKnown RBP5.07□□□□□ -1.6
HERC1-201ENST00000443617 NEK5Q6P3R8 708 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 OR8H2Q8N162 312 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 MOCS1Q9NZB8 636 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 TMX2-CTNND1H3BSU7 103 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 GPD2P43304 727 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 RHBDL3P58872 404 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 GRSF1Q12849 480 aaKnown RBP eCLIP5.07□□□□□ -1.6
HERC1-201ENST00000443617 TTC23Q5W5X9 447 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 R3HCC1LQ7Z5L2 792 aaKnown RBP5.07□□□□□ -1.6
HERC1-201ENST00000443617 ELMOD1Q8N336 334 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 SPERTQ8NA61 448 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 MCFD2Q8NI22 146 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 INTS10Q9NVR2 710 aaKnown RBP5.07□□□□□ -1.6
HERC1-201ENST00000443617 PCDHGA11Q9Y5H2 935 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms