RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 PAX3P23760 479 aa22.65■■□□□ 1.22
CTDSPL-206ENST00000443503 SMAD3P84022 425 aaKnown RBP22.65■■□□□ 1.22
CTDSPL-206ENST00000443503 ZFP1Q6P2D0 407 aa22.65■■□□□ 1.22
CTDSPL-206ENST00000443503 ISLR2Q6UXK2 745 aa22.65■■□□□ 1.22
CTDSPL-206ENST00000443503 TRMT11Q7Z4G4 463 aaKnown RBP22.65■■□□□ 1.22
CTDSPL-206ENST00000443503 STK40Q8N2I9 435 aa22.65■■□□□ 1.22
CTDSPL-206ENST00000443503 PANX3Q96QZ0 392 aa22.65■■□□□ 1.22
CTDSPL-206ENST00000443503 MINDY3Q9H8M7 445 aa22.65■■□□□ 1.22
CTDSPL-206ENST00000443503 CSH1P0DML2 217 aa22.65■■□□□ 1.22
CTDSPL-206ENST00000443503 CSH2P0DML3 217 aa22.65■■□□□ 1.22
CTDSPL-206ENST00000443503 IRX1P78414 480 aaPredicted RBP22.65■■□□□ 1.22
CTDSPL-206ENST00000443503 ADGRD1Q6QNK2 874 aa22.65■■□□□ 1.22
CTDSPL-206ENST00000443503 GPR141Q7Z602 305 aa22.65■■□□□ 1.22
CTDSPL-206ENST00000443503 ECHDC2Q86YB7 292 aa22.65■■□□□ 1.22
CTDSPL-206ENST00000443503 GMLQ99445 158 aa22.65■■□□□ 1.22
CTDSPL-206ENST00000443503 CHRAC1Q9NRG0 131 aa22.65■■□□□ 1.22
CTDSPL-206ENST00000443503 LZTS1Q9Y250 596 aa22.65■■□□□ 1.22
CTDSPL-206ENST00000443503 OR56A5P0C7T3 313 aa22.65■■□□□ 1.22
CTDSPL-206ENST00000443503 CYP2A7P20853 494 aa22.65■■□□□ 1.22
CTDSPL-206ENST00000443503 CDH13P55290 713 aa22.65■■□□□ 1.22
CTDSPL-206ENST00000443503 HPCAP84074 193 aa22.65■■□□□ 1.22
CTDSPL-206ENST00000443503 TAF10Q12962 218 aa22.65■■□□□ 1.22
CTDSPL-206ENST00000443503 DUSP4Q13115 394 aa22.65■■□□□ 1.22
CTDSPL-206ENST00000443503 NMD3Q96D46 503 aaKnown RBP22.65■■□□□ 1.22
CTDSPL-206ENST00000443503 RNF145Q96MT1 663 aa22.65■■□□□ 1.22
CTDSPL-206ENST00000443503 ZDHHC18Q9NUE0 388 aa22.65■■□□□ 1.22
CTDSPL-206ENST00000443503 ARL15Q9NXU5 204 aa22.65■■□□□ 1.22
CTDSPL-206ENST00000443503 PRR5-ARHGAP8B1AHC4 643 aa22.64■■□□□ 1.22
CTDSPL-206ENST00000443503 OR1D2P34982 312 aa22.64■■□□□ 1.22
CTDSPL-206ENST00000443503 ARHGAP8P85298 464 aa22.64■■□□□ 1.22
CTDSPL-206ENST00000443503 HSPA14Q0VDF9 509 aa22.64■■□□□ 1.22
CTDSPL-206ENST00000443503 LIPMQ5VYY2 423 aa22.64■■□□□ 1.22
CTDSPL-206ENST00000443503 NKAPQ8N5F7 415 aaKnown RBP22.64■■□□□ 1.22
CTDSPL-206ENST00000443503 NMUR2Q9GZQ4 415 aa22.64■■□□□ 1.22
CTDSPL-206ENST00000443503 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.64■■□□□ 1.226e-17■■■□□ 15.9
CTDSPL-206ENST00000443503 LRIG2O94898 1065 aa22.64■■□□□ 1.22
CTDSPL-206ENST00000443503 CRY1Q16526 586 aa22.64■■□□□ 1.22
CTDSPL-206ENST00000443503 CRELD2Q6UXH1 353 aaPredicted RBP22.64■■□□□ 1.22
CTDSPL-206ENST00000443503 CACUL1Q86Y37 369 aa22.64■■□□□ 1.22
CTDSPL-206ENST00000443503 QKIQ96PU8 341 aaKnown RBP eCLIP22.64■■□□□ 1.222e-8■■■■■ 34.7
CTDSPL-206ENST00000443503 A0A1W2PQH9 124 aa22.64■■□□□ 1.21
CTDSPL-206ENST00000443503 SERPINA6P08185 405 aa22.64■■□□□ 1.21
CTDSPL-206ENST00000443503 PTDSS1P48651 473 aaKnown RBP22.64■■□□□ 1.21
CTDSPL-206ENST00000443503 GALNT3Q14435 633 aa22.64■■□□□ 1.21
CTDSPL-206ENST00000443503 SPRYD7Q5W111 196 aa22.64■■□□□ 1.21
CTDSPL-206ENST00000443503 TXNRD3NBQ6F5E7 133 aa22.64■■□□□ 1.21
CTDSPL-206ENST00000443503 PRMT9Q6P2P2 845 aa22.64■■□□□ 1.21
CTDSPL-206ENST00000443503 CLNKQ7Z7G1 428 aa22.64■■□□□ 1.21
CTDSPL-206ENST00000443503 PCED1BQ96HM7 432 aa22.64■■□□□ 1.21
CTDSPL-206ENST00000443503 ZNF558Q96NG5 402 aa22.64■■□□□ 1.21
CTDSPL-206ENST00000443503 HNRNPABQ99729 332 aaKnown RBP22.64■■□□□ 1.21
CTDSPL-206ENST00000443503 TBC1D23Q9NUY8 699 aa22.64■■□□□ 1.21
CTDSPL-206ENST00000443503 DOLKQ9UPQ8 538 aa22.64■■□□□ 1.21
CTDSPL-206ENST00000443503 DEAF1O75398 565 aaPredicted RBP22.64■■□□□ 1.21
CTDSPL-206ENST00000443503 FAM58BPP0C7Q3 252 aa22.64■■□□□ 1.21
CTDSPL-206ENST00000443503 CHADLQ6NUI6 762 aa22.64■■□□□ 1.21
CTDSPL-206ENST00000443503 DRICH1Q6PGQ1 229 aaPredicted RBP22.64■■□□□ 1.21
CTDSPL-206ENST00000443503 HOMEZQ8IX15 550 aa22.64■■□□□ 1.21
CTDSPL-206ENST00000443503 CFAP52Q8N1V2 620 aa22.64■■□□□ 1.21
CTDSPL-206ENST00000443503 GFM2Q969S9 779 aaKnown RBP22.64■■□□□ 1.21
CTDSPL-206ENST00000443503 MFSD3Q96ES6 412 aa22.64■■□□□ 1.21
CTDSPL-206ENST00000443503 COMMD8Q9NX08 183 aa22.64■■□□□ 1.21
CTDSPL-206ENST00000443503 FITM2Q8N6M3 262 aa22.63■■□□□ 1.21
CTDSPL-206ENST00000443503 VPS33AQ96AX1 596 aa22.63■■□□□ 1.21
CTDSPL-206ENST00000443503 TWNKQ96RR1 684 aa22.63■■□□□ 1.21
CTDSPL-206ENST00000443503 LPIN3Q9BQK8 851 aa22.63■■□□□ 1.21
CTDSPL-206ENST00000443503 SEMA6AQ9H2E6 1030 aa22.63■■□□□ 1.21
CTDSPL-206ENST00000443503 ARL8BQ9NVJ2 186 aa22.63■■□□□ 1.21
CTDSPL-206ENST00000443503 KLQ9UEF7 1012 aa22.63■■□□□ 1.21
CTDSPL-206ENST00000443503 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.63■■□□□ 1.21
CTDSPL-206ENST00000443503 C2orf71A6NGG8 1288 aa22.63■■□□□ 1.21
CTDSPL-206ENST00000443503 LDLRP01130 860 aa22.63■■□□□ 1.21
CTDSPL-206ENST00000443503 ASGR1P07306 291 aa22.63■■□□□ 1.21
CTDSPL-206ENST00000443503 TCF4P15884 667 aa22.63■■□□□ 1.21
CTDSPL-206ENST00000443503 RAD23AP54725 363 aa22.63■■□□□ 1.21
CTDSPL-206ENST00000443503 SCIMPQ6UWF3 145 aa22.63■■□□□ 1.21
CTDSPL-206ENST00000443503 BHLHE22Q8NFJ8 381 aaPredicted RBP22.63■■□□□ 1.21
CTDSPL-206ENST00000443503 APOA1P02647 267 aa22.63■■□□□ 1.21
CTDSPL-206ENST00000443503 FAM98BQ52LJ0 330 aaKnown RBP22.63■■□□□ 1.21
CTDSPL-206ENST00000443503 FAM126AQ9BYI3 521 aaPredicted RBP22.63■■□□□ 1.21
CTDSPL-206ENST00000443503 VWA7Q9Y334 891 aa22.63■■□□□ 1.21
CTDSPL-206ENST00000443503 FZD9O00144 591 aa22.62■■□□□ 1.21
CTDSPL-206ENST00000443503 AMHP03971 560 aa22.62■■□□□ 1.21
CTDSPL-206ENST00000443503 CHI3L1P36222 383 aaPredicted RBP22.62■■□□□ 1.21
CTDSPL-206ENST00000443503 RANBP1P43487 201 aa22.62■■□□□ 1.21
CTDSPL-206ENST00000443503 MAD2L1Q13257 205 aaPredicted RBP22.62■■□□□ 1.21
CTDSPL-206ENST00000443503 CA9Q16790 459 aa22.62■■□□□ 1.21
CTDSPL-206ENST00000443503 C11orf74Q86VG3 221 aa22.62■■□□□ 1.21
CTDSPL-206ENST00000443503 ATG16L2Q8NAA4 619 aa22.62■■□□□ 1.21
CTDSPL-206ENST00000443503 CLEC4CQ8WTT0 213 aa22.62■■□□□ 1.21
CTDSPL-206ENST00000443503 LIMD1Q9UGP4 676 aa22.62■■□□□ 1.21
CTDSPL-206ENST00000443503 RGSL1A5PLK6 1076 aa22.62■■□□□ 1.21
CTDSPL-206ENST00000443503 DUSP11O75319 330 aaKnown RBP22.62■■□□□ 1.21
CTDSPL-206ENST00000443503 CCT8P50990 548 aa22.62■■□□□ 1.21
CTDSPL-206ENST00000443503 RABGGTBP53611 331 aa22.62■■□□□ 1.21
CTDSPL-206ENST00000443503 SLC5A3P53794 718 aa22.62■■□□□ 1.21
CTDSPL-206ENST00000443503 TARBP2Q15633 366 aaKnown RBP22.62■■□□□ 1.21
CTDSPL-206ENST00000443503 PPM1JQ5JR12 505 aa22.62■■□□□ 1.21
CTDSPL-206ENST00000443503 NR1H4Q96RI1 486 aaPredicted RBP22.62■■□□□ 1.21
CTDSPL-206ENST00000443503 LGALS13Q9UHV8 139 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms