RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 GCNT7Q6ZNI0 430 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 LRRC69Q6ZNQ3 347 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 Q6ZSR6 202 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 KANSL1Q7Z3B3 1105 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 TMC6Q7Z403 805 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 SLFN11Q7Z7L1 901 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 PDZD3Q86UT5 571 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 PLPP6Q8IY26 295 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 C3orf20Q8ND61 904 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 OR2AP1Q8NGE2 309 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 OR6K2Q8NGY2 324 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 JOSD2Q8TAC2 188 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 ARHGEF2Q92974 986 aaKnown RBP11.98□□□□□ -0.49
TTC28-203ENST00000442232 NTAN1Q96AB6 310 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 IFT43Q96FT9 208 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 GDAP1L1Q96MZ0 367 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 EPAS1Q99814 870 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 DUSP23Q9BVJ7 150 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 C1QTNF7Q9BXJ2 289 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 ZNF212Q9UDV6 495 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 ZFR2Q9UPR6 939 aaKnown RBP11.98□□□□□ -0.49
TTC28-203ENST00000442232 FADS3Q9Y5Q0 445 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 HS3ST3A1Q9Y663 406 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 ITPR1Q14643 2758 aa11.97□□□□□ -0.49
TTC28-203ENST00000442232 EIF4E1BA6NMX2 242 aaKnown RBP11.97□□□□□ -0.49
TTC28-203ENST00000442232 C16orf96A6NNT2 1141 aa11.97□□□□□ -0.49
TTC28-203ENST00000442232 LGALS16A8MUM7 142 aa11.97□□□□□ -0.49
TTC28-203ENST00000442232 RRP8O43159 456 aaKnown RBP11.97□□□□□ -0.49
TTC28-203ENST00000442232 BUB1O43683 1085 aa11.97□□□□□ -0.49
TTC28-203ENST00000442232 LRIG2O94898 1065 aa11.97□□□□□ -0.49
TTC28-203ENST00000442232 GJB6O95452 261 aa11.97□□□□□ -0.49
TTC28-203ENST00000442232 POP4O95707 220 aaKnown RBP11.97□□□□□ -0.49
TTC28-203ENST00000442232 IGSF6O95976 241 aa11.97□□□□□ -0.49
TTC28-203ENST00000442232 XPAP23025 273 aaPredicted RBP11.97□□□□□ -0.49
TTC28-203ENST00000442232 HDAC4P56524 1084 aa11.97□□□□□ -0.49
TTC28-203ENST00000442232 CLDN6P56747 220 aa11.97□□□□□ -0.49
TTC28-203ENST00000442232 TARDBPQ13148 414 aaKnown RBP eCLIP11.97□□□□□ -0.49
TTC28-203ENST00000442232 PROX2Q3B8N5 592 aa11.97□□□□□ -0.49
TTC28-203ENST00000442232 ZNF805Q5CZA5 627 aa11.97□□□□□ -0.49
TTC28-203ENST00000442232 MANEALQ5VSG8 457 aa11.97□□□□□ -0.49
TTC28-203ENST00000442232 PPP1R2P3Q6NXS1 205 aa11.97□□□□□ -0.49
TTC28-203ENST00000442232 DCUN1D2Q6PH85 259 aa11.97□□□□□ -0.49
TTC28-203ENST00000442232 CLEC17AQ6ZS10 378 aa11.97□□□□□ -0.49
TTC28-203ENST00000442232 ABI3BPQ7Z7G0 1075 aa11.97□□□□□ -0.49
TTC28-203ENST00000442232 NLRP14Q86W24 1093 aa11.97□□□□□ -0.49
TTC28-203ENST00000442232 PARGQ86W56 976 aa11.97□□□□□ -0.49
TTC28-203ENST00000442232 CCDC185Q8N715 623 aa11.97□□□□□ -0.49
TTC28-203ENST00000442232 CASKIN2Q8WXE0 1202 aa11.97□□□□□ -0.49
TTC28-203ENST00000442232 BAP1Q92560 729 aa11.97□□□□□ -0.49
TTC28-203ENST00000442232 NCAPGQ9BPX3 1015 aa11.97□□□□□ -0.49
TTC28-203ENST00000442232 NRSN2Q9GZP1 204 aa11.97□□□□□ -0.49
TTC28-203ENST00000442232 CATSPERBQ9H7T0 1116 aa11.97□□□□□ -0.49
TTC28-203ENST00000442232 USP29Q9HBJ7 922 aa11.97□□□□□ -0.49
TTC28-203ENST00000442232 DONSONQ9NYP3 566 aa11.97□□□□□ -0.49
TTC28-203ENST00000442232 NLGN3Q9NZ94 848 aa11.97□□□□□ -0.49
TTC28-203ENST00000442232 LIMA1Q9UHB6 759 aaKnown RBP11.97□□□□□ -0.49
TTC28-203ENST00000442232 CLCA2Q9UQC9 943 aa11.97□□□□□ -0.49
TTC28-203ENST00000442232 SIK3Q9Y2K2 1263 aa11.97□□□□□ -0.49
TTC28-203ENST00000442232 TRIM38O00635 465 aa11.96□□□□□ -0.49
TTC28-203ENST00000442232 EPHB6O15197 1021 aa11.96□□□□□ -0.49
TTC28-203ENST00000442232 CREB3O43889 395 aa11.96□□□□□ -0.49
TTC28-203ENST00000442232 ZNF821O75541 412 aaPredicted RBP11.96□□□□□ -0.49
TTC28-203ENST00000442232 UGT2B4P06133 528 aa11.96□□□□□ -0.49
TTC28-203ENST00000442232 UNGP13051 313 aaPredicted RBP11.96□□□□□ -0.49
TTC28-203ENST00000442232 EPHB2P29323 1055 aa11.96□□□□□ -0.49
TTC28-203ENST00000442232 RFC1P35251 1148 aaPredicted RBP11.96□□□□□ -0.49
TTC28-203ENST00000442232 THOP1P52888 689 aa11.96□□□□□ -0.49
TTC28-203ENST00000442232 RHOAP61586 193 aa11.96□□□□□ -0.49
TTC28-203ENST00000442232 SEMG2Q02383 582 aa11.96□□□□□ -0.49
TTC28-203ENST00000442232 C1QBPQ07021 282 aaKnown RBP11.96□□□□□ -0.49
TTC28-203ENST00000442232 RAB6CQ53S08 254 aa11.96□□□□□ -0.49
TTC28-203ENST00000442232 LEKR1Q6ZMV7 388 aa11.96□□□□□ -0.49
TTC28-203ENST00000442232 PHF13Q86YI8 300 aaPredicted RBP11.96□□□□□ -0.49
TTC28-203ENST00000442232 SLC25A45Q8N413 288 aa11.96□□□□□ -0.49
TTC28-203ENST00000442232 DENND6BQ8NEG7 585 aa11.96□□□□□ -0.49
TTC28-203ENST00000442232 CXorf40AQ8TE69 158 aa11.96□□□□□ -0.49
TTC28-203ENST00000442232 CENPIQ92674 756 aaPredicted RBP11.96□□□□□ -0.49
TTC28-203ENST00000442232 MCEEQ96PE7 176 aa11.96□□□□□ -0.49
TTC28-203ENST00000442232 AGPAT1Q99943 283 aa11.96□□□□□ -0.49
TTC28-203ENST00000442232 NAT10Q9H0A0 1025 aaKnown RBP11.96□□□□□ -0.49
TTC28-203ENST00000442232 RAB6CQ9H0N0 254 aa11.96□□□□□ -0.49
TTC28-203ENST00000442232 NDFIP2Q9NV92 336 aa11.96□□□□□ -0.49
TTC28-203ENST00000442232 UCKL1Q9NWZ5 548 aa11.96□□□□□ -0.49
TTC28-203ENST00000442232 NCKIPSDQ9NZQ3 722 aa11.96□□□□□ -0.49
TTC28-203ENST00000442232 ACTL7AQ9Y615 435 aa11.96□□□□□ -0.49
TTC28-203ENST00000442232 ATRXP46100 2492 aa11.95□□□□□ -0.5
TTC28-203ENST00000442232 A0A087WV48 116 aa11.95□□□□□ -0.5
TTC28-203ENST00000442232 IGLON5A6NGN9 336 aa11.95□□□□□ -0.5
TTC28-203ENST00000442232 SIGLEC16A6NMB1 481 aa11.95□□□□□ -0.5
TTC28-203ENST00000442232 FAM72CH0Y354 149 aa11.95□□□□□ -0.5
TTC28-203ENST00000442232 RIOK3O14730 519 aaKnown RBP11.95□□□□□ -0.5
TTC28-203ENST00000442232 FGF10O15520 208 aaPredicted RBP11.95□□□□□ -0.5
TTC28-203ENST00000442232 CCP110O43303 1012 aa11.95□□□□□ -0.5
TTC28-203ENST00000442232 KDELR3O43731 214 aa11.95□□□□□ -0.5
TTC28-203ENST00000442232 TMCC1O94876 653 aa11.95□□□□□ -0.5
TTC28-203ENST00000442232 MBD3O95983 291 aa11.95□□□□□ -0.5
TTC28-203ENST00000442232 PAK4O96013 591 aaPredicted RBP11.95□□□□□ -0.5
TTC28-203ENST00000442232 CKMT1AP12532 417 aa11.95□□□□□ -0.5
TTC28-203ENST00000442232 FERP16591 822 aa11.95□□□□□ -0.5
TTC28-203ENST00000442232 GKP32189 559 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms