RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 UBXN1Q04323 297 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 KRT31Q15323 416 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 INO80DQ53TQ3 878 aaPredicted RBP7.92□□□□□ -1.14
CD44-211ENST00000442151 ZNF805Q5CZA5 627 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 CDKAL1Q5VV42 579 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 DNAJC24Q6P3W2 148 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 DHRS13Q6UX07 377 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 BNIPLQ7Z465 357 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 FAM131BQ86XD5 332 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 PHF13Q86YI8 300 aaPredicted RBP7.92□□□□□ -1.14
CD44-211ENST00000442151 ZNF683Q8IZ20 524 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 DENND6BQ8NEG7 585 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 WDR48Q8TAF3 677 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 CFAP57Q96MR6 1250 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 FAM207AQ9NSI2 230 aaPredicted RBP7.92□□□□□ -1.14
CD44-211ENST00000442151 SEPT11Q9NVA2 429 aaKnown RBP7.92□□□□□ -1.14
CD44-211ENST00000442151 MPP6Q9NZW5 540 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 LIMA1Q9UHB6 759 aaKnown RBP7.92□□□□□ -1.14
CD44-211ENST00000442151 BTBD3Q9Y2F9 522 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 AK5Q9Y6K8 562 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 CSNK1G3Q9Y6M4 447 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 LRRC10BA6NIK2 292 aa7.91□□□□□ -1.14
CD44-211ENST00000442151 C2CD4BA6NLJ0 364 aa7.91□□□□□ -1.14
CD44-211ENST00000442151 LEFTY1O75610 366 aa7.91□□□□□ -1.14
CD44-211ENST00000442151 IGSF6O95976 241 aa7.91□□□□□ -1.14
CD44-211ENST00000442151 IGHA1P01876 353 aa7.91□□□□□ -1.14
CD44-211ENST00000442151 ADRB3P13945 408 aa7.91□□□□□ -1.14
CD44-211ENST00000442151 VAV1P15498 845 aa7.91□□□□□ -1.14
CD44-211ENST00000442151 RRM1P23921 792 aa7.91□□□□□ -1.14
CD44-211ENST00000442151 FLT3P36888 993 aa7.91□□□□□ -1.14
CD44-211ENST00000442151 BLKP51451 505 aa7.91□□□□□ -1.14
CD44-211ENST00000442151 YPEL5P62699 121 aa7.91□□□□□ -1.14
CD44-211ENST00000442151 PPP2CBP62714 309 aa7.91□□□□□ -1.14
CD44-211ENST00000442151 PPP2CAP67775 309 aa7.91□□□□□ -1.14
CD44-211ENST00000442151 ZNF284Q2VY69 593 aa7.91□□□□□ -1.14
CD44-211ENST00000442151 MYLK3Q32MK0 819 aa7.91□□□□□ -1.14
CD44-211ENST00000442151 PARP15Q460N3 678 aa7.91□□□□□ -1.14
CD44-211ENST00000442151 HSP90AA4PQ58FG1 418 aa7.91□□□□□ -1.14
CD44-211ENST00000442151 KCNT1Q5JUK3 1230 aa7.91□□□□□ -1.14
CD44-211ENST00000442151 CFAP58Q5T655 872 aa7.91□□□□□ -1.14
CD44-211ENST00000442151 PIP5KL1Q5T9C9 394 aa7.91□□□□□ -1.14
CD44-211ENST00000442151 DPY19L2P1Q6NXN4 242 aa7.91□□□□□ -1.14
CD44-211ENST00000442151 DCUN1D2Q6PH85 259 aa7.91□□□□□ -1.14
CD44-211ENST00000442151 DPY19L3Q6ZPD9 716 aa7.91□□□□□ -1.14
CD44-211ENST00000442151 GATAD2AQ86YP4 633 aa7.91□□□□□ -1.14
CD44-211ENST00000442151 DRC7Q8IY82 874 aa7.91□□□□□ -1.14
CD44-211ENST00000442151 SDR16C5Q8N3Y7 309 aa7.91□□□□□ -1.14
CD44-211ENST00000442151 C3orf20Q8ND61 904 aa7.91□□□□□ -1.14
CD44-211ENST00000442151 OR7D4Q8NG98 312 aa7.91□□□□□ -1.14
CD44-211ENST00000442151 SCG3Q8WXD2 468 aaKnown RBP7.91□□□□□ -1.14
CD44-211ENST00000442151 TSC1Q92574 1164 aa7.91□□□□□ -1.14
CD44-211ENST00000442151 CENPIQ92674 756 aaPredicted RBP7.91□□□□□ -1.14
CD44-211ENST00000442151 TBATAQ96M53 351 aa7.91□□□□□ -1.14
CD44-211ENST00000442151 GDAP1L1Q96MZ0 367 aa7.91□□□□□ -1.14
CD44-211ENST00000442151 AGPAT1Q99943 283 aa7.91□□□□□ -1.14
CD44-211ENST00000442151 ABCG4Q9H172 646 aa7.91□□□□□ -1.14
CD44-211ENST00000442151 GANQ9H2C0 597 aa7.91□□□□□ -1.14
CD44-211ENST00000442151 EBF2Q9HAK2 575 aa7.91□□□□□ -1.14
CD44-211ENST00000442151 NLRC4Q9NPP4 1024 aa7.91□□□□□ -1.14
CD44-211ENST00000442151 LMBRD1Q9NUN5 540 aa7.91□□□□□ -1.14
CD44-211ENST00000442151 FANCLQ9NW38 375 aa7.91□□□□□ -1.14
CD44-211ENST00000442151 NLGN3Q9NZ94 848 aa7.91□□□□□ -1.14
CD44-211ENST00000442151 NOCTQ9UK39 431 aaKnown RBP7.91□□□□□ -1.14
CD44-211ENST00000442151 AJAP1Q9UKB5 411 aaPredicted RBP7.91□□□□□ -1.14
CD44-211ENST00000442151 SARDHQ9UL12 918 aa7.91□□□□□ -1.14
CD44-211ENST00000442151 COL5A1P20908 1838 aaPredicted RBP7.9□□□□□ -1.14
CD44-211ENST00000442151 A0A0D9SEW6 157 aa7.9□□□□□ -1.14
CD44-211ENST00000442151 LGALS16A8MUM7 142 aa7.9□□□□□ -1.14
CD44-211ENST00000442151 TPP1O14773 563 aa7.9□□□□□ -1.14
CD44-211ENST00000442151 BUB1O43683 1085 aa7.9□□□□□ -1.14
CD44-211ENST00000442151 RNF8O76064 485 aa7.9□□□□□ -1.14
CD44-211ENST00000442151 MT-CO1P00395 513 aa7.9□□□□□ -1.14
CD44-211ENST00000442151 GP1BAP07359 652 aa7.9□□□□□ -1.14
CD44-211ENST00000442151 PNMA6AP0CW24 399 aaPredicted RBP7.9□□□□□ -1.14
CD44-211ENST00000442151 UNGP13051 313 aaPredicted RBP7.9□□□□□ -1.14
CD44-211ENST00000442151 GLDCP23378 1020 aa7.9□□□□□ -1.14
CD44-211ENST00000442151 ACADVLP49748 655 aa7.9□□□□□ -1.14
CD44-211ENST00000442151 CCNHP51946 323 aaPredicted RBP7.9□□□□□ -1.14
CD44-211ENST00000442151 JAM2P57087 298 aa7.9□□□□□ -1.14
CD44-211ENST00000442151 FMO1Q01740 532 aa7.9□□□□□ -1.14
CD44-211ENST00000442151 CYP4F3Q08477 520 aa7.9□□□□□ -1.14
CD44-211ENST00000442151 ELP6Q0PNE2 266 aa7.9□□□□□ -1.14
CD44-211ENST00000442151 BNIP3Q12983 259 aa7.9□□□□□ -1.14
CD44-211ENST00000442151 CDO1Q16878 200 aa7.9□□□□□ -1.14
CD44-211ENST00000442151 CLEC16AQ2KHT3 1053 aa7.9□□□□□ -1.14
CD44-211ENST00000442151 CCDC14Q49A88 953 aa7.9□□□□□ -1.14
CD44-211ENST00000442151 SFMBT2Q5VUG0 894 aa7.9□□□□□ -1.14
CD44-211ENST00000442151 ACAD10Q6JQN1 1059 aa7.9□□□□□ -1.14
CD44-211ENST00000442151 SCYL2Q6P3W7 929 aa7.9□□□□□ -1.14
CD44-211ENST00000442151 LINGO4Q6UY18 593 aa7.9□□□□□ -1.14
CD44-211ENST00000442151 GDPD4Q6W3E5 623 aa7.9□□□□□ -1.14
CD44-211ENST00000442151 KYAT3Q6YP21 454 aaKnown RBP7.9□□□□□ -1.14
CD44-211ENST00000442151 Q6ZSR6 202 aa7.9□□□□□ -1.14
CD44-211ENST00000442151 ABI3BPQ7Z7G0 1075 aa7.9□□□□□ -1.14
CD44-211ENST00000442151 FAM181AQ8N9Y4 354 aa7.9□□□□□ -1.14
CD44-211ENST00000442151 TMEM145Q8NBT3 493 aa7.9□□□□□ -1.14
CD44-211ENST00000442151 OR2AP1Q8NGE2 309 aa7.9□□□□□ -1.14
CD44-211ENST00000442151 OR4C6Q8NH72 309 aa7.9□□□□□ -1.14
CD44-211ENST00000442151 CXorf40AQ8TE69 158 aa7.9□□□□□ -1.14
CD44-211ENST00000442151 FAM172AQ8WUF8 416 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms