RNA–Protein interactions for RNA: ENST00000441871.5

R3HDM1-209, Transcript of R3H domain containing 1, humanhuman

TSL 4

Gene R3HDM1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-209ENST00000441871 ZNF772Q68DY9 489 aaPredicted RBP4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 METTL2BQ6P1Q9 378 aaKnown RBP4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 CYB5D1Q6P9G0 228 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 TTC23LQ6PF05 361 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 CES3Q6UWW8 571 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 TMC5Q6UXY8 1006 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 TMC3Q7Z5M5 1100 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 ZC3H7AQ8IWR0 971 aaKnown RBP4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 KDM8Q8N371 416 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 GALNT4Q8N4A0 578 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 ATAD1Q8NBU5 361 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 ICA1LQ8NDH6 482 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 BVESQ8NE79 360 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 SPATA4Q8NEY3 305 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 OR6Y1Q8NGX8 325 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 SCAMP5Q8TAC9 235 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 SLC22A17Q8WUG5 538 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 CHURC1Q8WUH1 139 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 OR1E3Q8WZA6 343 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 CORO2AQ92828 525 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 CELF1Q92879 486 aaKnown RBP4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 SLAMF9Q96A28 289 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 GRAMD1AQ96CP6 724 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 CCDC51Q96ER9 411 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 TMA16Q96EY4 203 aaKnown RBP4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 HES6Q96HZ4 224 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 MAGED4Q96JG8 741 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 MSLNLQ96KJ4 702 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 MRGPRX3Q96LB0 322 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 SAMD8Q96LT4 415 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 HHIPQ96QV1 700 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 SEMA3CQ99985 751 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 GDF15Q99988 308 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 JPH2Q9BR39 696 aaPredicted RBP4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 TUBB6Q9BUF5 446 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 WDR18Q9BV38 432 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 TDRD1Q9BXT4 1180 aaKnown RBP4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 PBX4Q9BYU1 374 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 TRIM54Q9BYV2 358 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 DCLK3Q9C098 648 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 FAM192AQ9GZU8 254 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 TWSG1Q9GZX9 223 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 TMEM117Q9H0C3 514 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 QRSL1Q9H0R6 528 aaKnown RBP4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 PABPC3Q9H361 631 aaKnown RBP4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 RMND5AQ9H871 391 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 PCDH9Q9HC56 1237 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 MBNL1Q9NR56 388 aaKnown RBP4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 KCNH7Q9NS40 1196 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 GIMAP4Q9NUV9 329 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 FBXO28Q9NVF7 368 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 KLHL28Q9NXS3 571 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 PI4KBQ9UBF8 816 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 TUBE1Q9UJT0 475 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 DNPEPQ9ULA0 475 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 HSF4Q9ULV5 492 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 RNF112Q9ULX5 631 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 ZNF148Q9UQR1 794 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 SLC22A14Q9Y267 594 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 SLC9A8Q9Y2E8 581 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 STRAPQ9Y3F4 350 aaKnown RBP4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 SAMM50Q9Y512 469 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 NACADO15069 1562 aa4.02□□□□□ -1.77
R3HDM1-209ENST00000441871 AK9Q5TCS8 1911 aa4.01□□□□□ -1.77
R3HDM1-209ENST00000441871 PRR36Q9H6K5 1346 aa4.01□□□□□ -1.77
R3HDM1-209ENST00000441871 TRIM49BA6NDI0 452 aa4.01□□□□□ -1.77
R3HDM1-209ENST00000441871 TMEM247A6NEH6 219 aa4.01□□□□□ -1.77
R3HDM1-209ENST00000441871 TMEM210A6NLX4 147 aa4.01□□□□□ -1.77
R3HDM1-209ENST00000441871 PRR23D1E9PI22 279 aaPredicted RBP4.01□□□□□ -1.77
R3HDM1-209ENST00000441871 MYO1FO00160 1098 aa4.01□□□□□ -1.77
R3HDM1-209ENST00000441871 DLL1O00548 723 aa4.01□□□□□ -1.77
R3HDM1-209ENST00000441871 NOP56O00567 594 aaKnown RBP4.01□□□□□ -1.77
R3HDM1-209ENST00000441871 FCHO1O14526 889 aa4.01□□□□□ -1.77
R3HDM1-209ENST00000441871 TNPO2O14787 897 aaKnown RBP4.01□□□□□ -1.77
R3HDM1-209ENST00000441871 PCDH17O14917 1159 aa4.01□□□□□ -1.77
R3HDM1-209ENST00000441871 LRRTM2O43300 516 aa4.01□□□□□ -1.77
R3HDM1-209ENST00000441871 HCRTR2O43614 444 aa4.01□□□□□ -1.77
R3HDM1-209ENST00000441871 RECQL5O94762 991 aaPredicted RBP4.01□□□□□ -1.77
R3HDM1-209ENST00000441871 ACTL6BO94805 426 aa4.01□□□□□ -1.77
R3HDM1-209ENST00000441871 CDK14O94921 469 aa4.01□□□□□ -1.77
R3HDM1-209ENST00000441871 PDE8BO95263 885 aa4.01□□□□□ -1.77
R3HDM1-209ENST00000441871 NDST3O95803 873 aa4.01□□□□□ -1.77
R3HDM1-209ENST00000441871 ONECUT2O95948 504 aa4.01□□□□□ -1.77
R3HDM1-209ENST00000441871 MT-ATP6P00846 226 aa4.01□□□□□ -1.77
R3HDM1-209ENST00000441871 IGHEP01854 428 aa4.01□□□□□ -1.77
R3HDM1-209ENST00000441871 CRYGCP07315 174 aa4.01□□□□□ -1.77
R3HDM1-209ENST00000441871 SNRPB2P08579 225 aaKnown RBP4.01□□□□□ -1.77
R3HDM1-209ENST00000441871 IGFBP1P08833 259 aaPredicted RBP4.01□□□□□ -1.77
R3HDM1-209ENST00000441871 PRR23D2P0DMB1 279 aaPredicted RBP4.01□□□□□ -1.77
R3HDM1-209ENST00000441871 THRBP10828 461 aa4.01□□□□□ -1.77
R3HDM1-209ENST00000441871 PKMP14618 531 aaKnown RBP4.01□□□□□ -1.77
R3HDM1-209ENST00000441871 PDE6AP16499 860 aa4.01□□□□□ -1.77
R3HDM1-209ENST00000441871 YBX3P16989 372 aaKnown RBP eCLIP4.01□□□□□ -1.77
R3HDM1-209ENST00000441871 SLC9A1P19634 815 aa4.01□□□□□ -1.77
R3HDM1-209ENST00000441871 EDNRBP24530 442 aa4.01□□□□□ -1.77
R3HDM1-209ENST00000441871 PSMA2P25787 234 aa4.01□□□□□ -1.77
R3HDM1-209ENST00000441871 CD1BP29016 333 aa4.01□□□□□ -1.77
R3HDM1-209ENST00000441871 EPHA8P29322 1005 aaPredicted RBP4.01□□□□□ -1.77
R3HDM1-209ENST00000441871 CCND2P30279 289 aa4.01□□□□□ -1.77
R3HDM1-209ENST00000441871 ALDH3A1P30838 453 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms