RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 PRAMEF26H0Y7S4 382 aa10.63□□□□□ -0.71
MCF2L-216ENST00000439475 DFFAO00273 331 aa10.63□□□□□ -0.71
MCF2L-216ENST00000439475 PLK4O00444 970 aa10.63□□□□□ -0.71
MCF2L-216ENST00000439475 NEMP1O14524 444 aa10.63□□□□□ -0.71
MCF2L-216ENST00000439475 VILLO15195 856 aa10.63□□□□□ -0.71
MCF2L-216ENST00000439475 PALMO75781 387 aa10.63□□□□□ -0.71
MCF2L-216ENST00000439475 PROSCO94903 275 aa10.63□□□□□ -0.71
MCF2L-216ENST00000439475 KCNK5O95279 499 aa10.63□□□□□ -0.71
MCF2L-216ENST00000439475 ZNF883P0CG24 379 aa10.63□□□□□ -0.71
MCF2L-216ENST00000439475 XPAP23025 273 aaPredicted RBP10.63□□□□□ -0.71
MCF2L-216ENST00000439475 AMPD1P23109 780 aa10.63□□□□□ -0.71
MCF2L-216ENST00000439475 IL1R2P27930 398 aa10.63□□□□□ -0.71
MCF2L-216ENST00000439475 CYLC1P35663 651 aaPredicted RBP10.63□□□□□ -0.71
MCF2L-216ENST00000439475 ARHGAP25P42331 645 aa10.63□□□□□ -0.71
MCF2L-216ENST00000439475 NOVA1P51513 510 aaKnown RBP10.63□□□□□ -0.71
MCF2L-216ENST00000439475 RENBPP51606 427 aa10.63□□□□□ -0.71
MCF2L-216ENST00000439475 CDH6P55285 790 aa10.63□□□□□ -0.71
MCF2L-216ENST00000439475 IL10RBQ08334 325 aa10.63□□□□□ -0.71
MCF2L-216ENST00000439475 OVGP1Q12889 678 aa10.63□□□□□ -0.71
MCF2L-216ENST00000439475 TBX2Q13207 712 aaPredicted RBP10.63□□□□□ -0.71
MCF2L-216ENST00000439475 PDK2Q15119 407 aa10.63□□□□□ -0.71
MCF2L-216ENST00000439475 HLA-BQ31612 363 aa10.63□□□□□ -0.71
MCF2L-216ENST00000439475 ODF2Q5BJF6 829 aa10.63□□□□□ -0.71
MCF2L-216ENST00000439475 ZNF805Q5CZA5 627 aa10.63□□□□□ -0.71
MCF2L-216ENST00000439475 CFAP58Q5T655 872 aa10.63□□□□□ -0.71
MCF2L-216ENST00000439475 PIP5KL1Q5T9C9 394 aa10.63□□□□□ -0.71
MCF2L-216ENST00000439475 NAPEPLDQ6IQ20 393 aa10.63□□□□□ -0.71
MCF2L-216ENST00000439475 GDPD4Q6W3E5 623 aa10.63□□□□□ -0.71
MCF2L-216ENST00000439475 LEKR1Q6ZMV7 388 aa10.63□□□□□ -0.71
MCF2L-216ENST00000439475 POLNQ7Z5Q5 900 aa10.63□□□□□ -0.71
MCF2L-216ENST00000439475 TTC7BQ86TV6 843 aa10.63□□□□□ -0.71
MCF2L-216ENST00000439475 OXR1Q8N573 874 aa10.63□□□□□ -0.71
MCF2L-216ENST00000439475 PAF1Q8N7H5 531 aa10.63□□□□□ -0.71
MCF2L-216ENST00000439475 MFSD2AQ8NA29 543 aa10.63□□□□□ -0.71
MCF2L-216ENST00000439475 KCTD6Q8NC69 237 aa10.63□□□□□ -0.71
MCF2L-216ENST00000439475 FAM174AQ8TBP5 190 aa10.63□□□□□ -0.71
MCF2L-216ENST00000439475 MRFAP1L1Q96HT8 127 aa10.63□□□□□ -0.71
MCF2L-216ENST00000439475 CINPQ9BW66 212 aaPredicted RBP10.63□□□□□ -0.71
MCF2L-216ENST00000439475 CPEB1Q9BZB8 566 aaKnown RBP10.63□□□□□ -0.71
MCF2L-216ENST00000439475 RBSNQ9H1K0 784 aa10.63□□□□□ -0.71
MCF2L-216ENST00000439475 TM7SF3Q9NS93 570 aa10.63□□□□□ -0.71
MCF2L-216ENST00000439475 NENFQ9UMX5 172 aa10.63□□□□□ -0.71
MCF2L-216ENST00000439475 ANKRD6Q9Y2G4 727 aa10.63□□□□□ -0.71
MCF2L-216ENST00000439475 MFHAS1Q9Y4C4 1052 aa10.63□□□□□ -0.71
MCF2L-216ENST00000439475 ACTL7AQ9Y615 435 aa10.63□□□□□ -0.71
MCF2L-216ENST00000439475 A0A1W2PQU0 124 aa10.62□□□□□ -0.71
MCF2L-216ENST00000439475 C16orf96A6NNT2 1141 aa10.62□□□□□ -0.71
MCF2L-216ENST00000439475 LATO43561 262 aa10.62□□□□□ -0.71
MCF2L-216ENST00000439475 TSPAN6O43657 245 aa10.62□□□□□ -0.71
MCF2L-216ENST00000439475 AP1G1O43747 822 aa10.62□□□□□ -0.71
MCF2L-216ENST00000439475 PRAMEF11O60813 436 aa10.62□□□□□ -0.71
MCF2L-216ENST00000439475 IPO7O95373 1038 aaKnown RBP10.62□□□□□ -0.71
MCF2L-216ENST00000439475 ADRB3P13945 408 aa10.62□□□□□ -0.71
MCF2L-216ENST00000439475 MAT2AP31153 395 aaKnown RBP10.62□□□□□ -0.71
MCF2L-216ENST00000439475 AKT2P31751 481 aa10.62□□□□□ -0.71
MCF2L-216ENST00000439475 MAN1A1P33908 653 aa10.62□□□□□ -0.71
MCF2L-216ENST00000439475 MAGEA1P43355 309 aa10.62□□□□□ -0.71
MCF2L-216ENST00000439475 SUOXP51687 545 aa10.62□□□□□ -0.71
MCF2L-216ENST00000439475 ZNF75DP51815 510 aa10.62□□□□□ -0.71
MCF2L-216ENST00000439475 METAP1P53582 386 aa10.62□□□□□ -0.71
MCF2L-216ENST00000439475 RPS21P63220 83 aaKnown RBP10.62□□□□□ -0.71
MCF2L-216ENST00000439475 NSUN2Q08J23 767 aaKnown RBP eCLIP10.62□□□□□ -0.71
MCF2L-216ENST00000439475 DPYSQ14117 519 aa10.62□□□□□ -0.71
MCF2L-216ENST00000439475 MESDQ14696 234 aa10.62□□□□□ -0.71
MCF2L-216ENST00000439475 CYTH1Q15438 398 aa10.62□□□□□ -0.71
MCF2L-216ENST00000439475 SPA17Q15506 151 aa10.62□□□□□ -0.71
MCF2L-216ENST00000439475 KIF19Q2TAC6 998 aa10.62□□□□□ -0.71
MCF2L-216ENST00000439475 KIAA1161Q6NSJ0 714 aa10.62□□□□□ -0.71
MCF2L-216ENST00000439475 CYP4V2Q6ZWL3 525 aaPredicted RBP10.62□□□□□ -0.71
MCF2L-216ENST00000439475 IQCHQ86VS3 1027 aa10.62□□□□□ -0.71
MCF2L-216ENST00000439475 HORMAD1Q86X24 394 aa10.62□□□□□ -0.71
MCF2L-216ENST00000439475 LRRC49Q8IUZ0 686 aa10.62□□□□□ -0.71
MCF2L-216ENST00000439475 CCDC170Q8IYT3 715 aa10.62□□□□□ -0.71
MCF2L-216ENST00000439475 OR6K2Q8NGY2 324 aa10.62□□□□□ -0.71
MCF2L-216ENST00000439475 SLC35G2Q8TBE7 412 aa10.62□□□□□ -0.71
MCF2L-216ENST00000439475 HCAR2Q8TDS4 363 aa10.62□□□□□ -0.71
MCF2L-216ENST00000439475 SLC6A18Q96N87 628 aa10.62□□□□□ -0.71
MCF2L-216ENST00000439475 KLHL32Q96NJ5 620 aa10.62□□□□□ -0.71
MCF2L-216ENST00000439475 ZNF599Q96NL3 588 aa10.62□□□□□ -0.71
MCF2L-216ENST00000439475 CSPG4P5Q96PW8 444 aa10.62□□□□□ -0.71
MCF2L-216ENST00000439475 PACSIN1Q9BY11 444 aa10.62□□□□□ -0.71
MCF2L-216ENST00000439475 PCDH18Q9HCL0 1135 aa10.62□□□□□ -0.71
MCF2L-216ENST00000439475 GDF3Q9NR23 364 aa10.62□□□□□ -0.71
MCF2L-216ENST00000439475 SPTLC3Q9NUV7 552 aa10.62□□□□□ -0.71
MCF2L-216ENST00000439475 HAUS2Q9NVX0 235 aa10.62□□□□□ -0.71
MCF2L-216ENST00000439475 SEPT3Q9UH03 358 aa10.62□□□□□ -0.71
MCF2L-216ENST00000439475 IPO11Q9UI26 975 aaKnown RBP10.62□□□□□ -0.71
MCF2L-216ENST00000439475 PCDHGB2Q9Y5G2 931 aa10.62□□□□□ -0.71
MCF2L-216ENST00000439475 SNX11Q9Y5W9 270 aa10.62□□□□□ -0.71
MCF2L-216ENST00000439475 MYO15AQ9UKN7 3530 aa10.61□□□□□ -0.71
MCF2L-216ENST00000439475 TMEM110-MUSTN1A8MSY1 372 aa10.61□□□□□ -0.71
MCF2L-216ENST00000439475 J3KR12 359 aa10.61□□□□□ -0.71
MCF2L-216ENST00000439475 TLR4O00206 839 aa10.61□□□□□ -0.71
MCF2L-216ENST00000439475 SLC31A1O15431 190 aa10.61□□□□□ -0.71
MCF2L-216ENST00000439475 YKT6O15498 198 aa10.61□□□□□ -0.71
MCF2L-216ENST00000439475 UGT2B4P06133 528 aa10.61□□□□□ -0.71
MCF2L-216ENST00000439475 HNRNPA2B1P22626 353 aaKnown RBP10.61□□□□□ -0.71
MCF2L-216ENST00000439475 NFKBIAP25963 317 aa10.61□□□□□ -0.71
MCF2L-216ENST00000439475 GJC1P36383 396 aa10.61□□□□□ -0.71
MCF2L-216ENST00000439475 SLC1A1P43005 524 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms