RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 SIGLEC10Q96LC7 697 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 MIPEPQ99797 713 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 EIF2AQ9BY44 585 aaKnown RBP6.76□□□□□ -1.33
CSDE1-205ENST00000438362 MUC3BQ9H195 1237 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 ZNF358Q9NW07 568 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 SLC17A6Q9P2U8 582 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 RSL24D1Q9UHA3 163 aaKnown RBP6.76□□□□□ -1.33
CSDE1-205ENST00000438362 POLG2Q9UHN1 485 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 CNTN6Q9UQ52 1028 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 SLC12A8A0AV02 714 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 CCDC154A6NI56 674 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 F5H5T6 163 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 NRP2O60462 931 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 SYNCRIPO60506 623 aaKnown RBP6.76□□□□□ -1.33
CSDE1-205ENST00000438362 TSPAN1O60635 241 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 VPS4BO75351 444 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 BCL10O95999 233 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 TSPAN8P19075 237 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 HARS2P49590 506 aaKnown RBP6.76□□□□□ -1.33
CSDE1-205ENST00000438362 CLK1P49759 484 aaKnown RBP6.76□□□□□ -1.33
CSDE1-205ENST00000438362 TBX4P57082 545 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 GTF2H3Q13889 308 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 MFSD10Q14728 455 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 DLG2Q15700 870 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 PFKFB4Q16877 469 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 EML3Q32P44 896 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 FAM98BQ52LJ0 330 aaKnown RBP6.76□□□□□ -1.33
CSDE1-205ENST00000438362 CACHD1Q5VU97 1274 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 ARHGAP17Q68EM7 881 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 GK5Q6ZS86 529 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 TMEM110Q86TL2 294 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 STK32CQ86UX6 486 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 WDTC1Q8N5D0 677 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 TOP6BLQ8N6T0 577 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 PTGR2Q8N8N7 351 aaPredicted RBP6.76□□□□□ -1.33
CSDE1-205ENST00000438362 FNDC5Q8NAU1 212 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 AZIN2Q96A70 460 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 PEBP4Q96S96 227 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 TRMOQ9BU70 441 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 SPATA16Q9BXB7 569 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 CACYBPQ9HB71 228 aaKnown RBP6.76□□□□□ -1.33
CSDE1-205ENST00000438362 WWOXQ9NZC7 414 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 IGSF9Q9P2J2 1179 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 ANAPC2Q9UJX6 822 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 NUDT5Q9UKK9 219 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 PCDHGB4Q9UN71 923 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 CNTNAP1P78357 1384 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 SMIM28A0A1B0GU29 152 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 IQCA1LA6NCM1 817 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 HNRNPRO43390 633 aaKnown RBP6.75□□□□□ -1.33
CSDE1-205ENST00000438362 RFPL1O75677 317 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 DDNO94850 711 aaPredicted RBP6.75□□□□□ -1.33
CSDE1-205ENST00000438362 POMCP01189 267 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 APOA1P02647 267 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 RECQLP46063 649 aaPredicted RBP6.75□□□□□ -1.33
CSDE1-205ENST00000438362 RAD23AP54725 363 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 CLDN10P78369 228 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 SNX17Q15036 470 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 CNPY1Q3B7I2 92 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 TNFAIP8L3Q5GJ75 292 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 STXBP5Q5T5C0 1151 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 MAP1SQ66K74 1059 aaPredicted RBP6.75□□□□□ -1.33
CSDE1-205ENST00000438362 SLC9A4Q6AI14 798 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 CGB2Q6NT52 195 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 CDHR3Q6ZTQ4 885 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 FAM35AQ86V20 835 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 CROCCP3Q8IVE0 287 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 FAM126BQ8IXS8 530 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 MICU2Q8IYU8 434 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 TRPM4Q8TD43 1214 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 NXNL1Q96CM4 212 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 TCF12Q99081 682 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 SH3GL1Q99961 368 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 GBA3Q9H227 469 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 DPEP3Q9H4B8 488 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 GLOD4Q9HC38 313 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 ABCC13Q9NSE7 274 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 COMMD8Q9NX08 183 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 CDH9Q9ULB4 789 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 TRAF6Q9Y4K3 522 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 ITGB4P16144 1822 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 A0A1B0GUL6 1792 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 DHRS12A0PJE2 317 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 T-ENOLP0DO92 83 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 PTPN3P26045 913 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 THPOP40225 353 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 INPP1P49441 399 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 PSEN2P49810 448 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 WNT7BP56706 349 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 ZNF252P-AS1Q0IIN9 211 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 DPYSQ14117 519 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 C6orf52Q5T4I8 152 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 CCDC81Q6ZN84 652 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 TIFABQ6ZNK6 161 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 CUZD1Q86UP6 607 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 CAND1Q86VP6 1230 aaKnown RBP6.75□□□□□ -1.33
CSDE1-205ENST00000438362 P3H2Q8IVL5 708 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 CENPLQ8N0S6 344 aaPredicted RBP6.75□□□□□ -1.33
CSDE1-205ENST00000438362 CLYBLQ8N0X4 340 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 GPC2Q8N158 579 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms