RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 NEMP1O14524 444 aa11.81□□□□□ -0.52
CHRNA1-207ENST00000435083 RIOK3O14730 519 aaKnown RBP11.81□□□□□ -0.52
CHRNA1-207ENST00000435083 TPP1O14773 563 aa11.81□□□□□ -0.52
CHRNA1-207ENST00000435083 CASC3O15234 703 aaKnown RBP11.81□□□□□ -0.52
CHRNA1-207ENST00000435083 SPINT1O43278 529 aa11.81□□□□□ -0.52
CHRNA1-207ENST00000435083 AP1G1O43747 822 aa11.81□□□□□ -0.52
CHRNA1-207ENST00000435083 SRGAP2O75044 1071 aa11.81□□□□□ -0.52
CHRNA1-207ENST00000435083 ZNF821O75541 412 aaPredicted RBP11.81□□□□□ -0.52
CHRNA1-207ENST00000435083 TCEA3O75764 348 aa11.81□□□□□ -0.52
CHRNA1-207ENST00000435083 WISP1O95388 367 aa11.81□□□□□ -0.52
CHRNA1-207ENST00000435083 SLC9A1P19634 815 aa11.81□□□□□ -0.52
CHRNA1-207ENST00000435083 KRT9P35527 623 aa11.81□□□□□ -0.52
CHRNA1-207ENST00000435083 SERPINH1P50454 418 aaKnown RBP11.81□□□□□ -0.52
CHRNA1-207ENST00000435083 CCNHP51946 323 aaPredicted RBP11.81□□□□□ -0.52
CHRNA1-207ENST00000435083 ADKP55263 362 aaKnown RBP11.81□□□□□ -0.52
CHRNA1-207ENST00000435083 MARSP56192 900 aaKnown RBP11.81□□□□□ -0.52
CHRNA1-207ENST00000435083 APBA1Q02410 837 aa11.81□□□□□ -0.52
CHRNA1-207ENST00000435083 PTK2Q05397 1052 aa11.81□□□□□ -0.52
CHRNA1-207ENST00000435083 SLC20A2Q08357 652 aa11.81□□□□□ -0.52
CHRNA1-207ENST00000435083 CLN3Q13286 438 aa11.81□□□□□ -0.52
CHRNA1-207ENST00000435083 PTPN20Q4JDL3 420 aa11.81□□□□□ -0.52
CHRNA1-207ENST00000435083 PRRT3Q5FWE3 981 aa11.81□□□□□ -0.52
CHRNA1-207ENST00000435083 FOXR2Q6PJQ5 311 aa11.81□□□□□ -0.52
CHRNA1-207ENST00000435083 PRICKLE2Q7Z3G6 844 aa11.81□□□□□ -0.52
CHRNA1-207ENST00000435083 CREBRFQ8IUR6 639 aa11.81□□□□□ -0.52
CHRNA1-207ENST00000435083 RYBPQ8N488 228 aaPredicted RBP11.81□□□□□ -0.52
CHRNA1-207ENST00000435083 PCDH20Q8N6Y1 951 aaKnown RBP11.81□□□□□ -0.52
CHRNA1-207ENST00000435083 ZNF397Q8NF99 534 aaPredicted RBP11.81□□□□□ -0.52
CHRNA1-207ENST00000435083 FAM81BQ96LP2 452 aa11.81□□□□□ -0.52
CHRNA1-207ENST00000435083 LENG8Q96PV6 779 aaPredicted RBP11.81□□□□□ -0.52
CHRNA1-207ENST00000435083 KLF6Q99612 283 aaPredicted RBP11.81□□□□□ -0.52
CHRNA1-207ENST00000435083 C1QTNF2Q9BXJ5 285 aa11.81□□□□□ -0.52
CHRNA1-207ENST00000435083 CEP44Q9C0F1 390 aa11.81□□□□□ -0.52
CHRNA1-207ENST00000435083 TCEAL2Q9H3H9 227 aaPredicted RBP11.81□□□□□ -0.52
CHRNA1-207ENST00000435083 ATP13A1Q9HD20 1204 aa11.81□□□□□ -0.52
CHRNA1-207ENST00000435083 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.81□□□□□ -0.52
CHRNA1-207ENST00000435083 APOBEC3BQ9UH17 382 aaKnown RBP11.81□□□□□ -0.52
CHRNA1-207ENST00000435083 STAP1Q9ULZ2 295 aa11.81□□□□□ -0.52
CHRNA1-207ENST00000435083 FCF1Q9Y324 198 aaKnown RBP11.81□□□□□ -0.52
CHRNA1-207ENST00000435083 CFAP46Q8IYW2 2715 aa11.81□□□□□ -0.52
CHRNA1-207ENST00000435083 CCDC187A0A096LP49 1063 aa11.8□□□□□ -0.52
CHRNA1-207ENST00000435083 ILVBLA1L0T0 632 aa11.8□□□□□ -0.52
CHRNA1-207ENST00000435083 ARHGAP6O43182 974 aa11.8□□□□□ -0.52
CHRNA1-207ENST00000435083 TSPAN6O43657 245 aa11.8□□□□□ -0.52
CHRNA1-207ENST00000435083 GCATO75600 419 aa11.8□□□□□ -0.52
CHRNA1-207ENST00000435083 F9P00740 461 aa11.8□□□□□ -0.52
CHRNA1-207ENST00000435083 ANXA6P08133 673 aa11.8□□□□□ -0.52
CHRNA1-207ENST00000435083 BMP6P22004 513 aa11.8□□□□□ -0.52
CHRNA1-207ENST00000435083 THOP1P52888 689 aa11.8□□□□□ -0.52
CHRNA1-207ENST00000435083 PFN3P60673 137 aa11.8□□□□□ -0.52
CHRNA1-207ENST00000435083 SPIDRQ14159 915 aa11.8□□□□□ -0.52
CHRNA1-207ENST00000435083 KIF26BQ2KJY2 2108 aa11.8□□□□□ -0.52
CHRNA1-207ENST00000435083 FAXCQ5TGI0 409 aa11.8□□□□□ -0.52
CHRNA1-207ENST00000435083 TRIM65Q6PJ69 517 aa11.8□□□□□ -0.52
CHRNA1-207ENST00000435083 ZSCAN30Q86W11 494 aa11.8□□□□□ -0.52
CHRNA1-207ENST00000435083 SLC35F3Q8IY50 421 aa11.8□□□□□ -0.52
CHRNA1-207ENST00000435083 DRC7Q8IY82 874 aa11.8□□□□□ -0.52
CHRNA1-207ENST00000435083 PHACTR4Q8IZ21 702 aa11.8□□□□□ -0.52
CHRNA1-207ENST00000435083 NAT6Q93015 286 aa11.8□□□□□ -0.52
CHRNA1-207ENST00000435083 C1orf74Q96LT6 269 aa11.8□□□□□ -0.52
CHRNA1-207ENST00000435083 CCNL2Q96S94 520 aaPredicted RBP11.8□□□□□ -0.52
CHRNA1-207ENST00000435083 TBCBQ99426 244 aa11.8□□□□□ -0.52
CHRNA1-207ENST00000435083 BOCQ9BWV1 1114 aa11.8□□□□□ -0.52
CHRNA1-207ENST00000435083 TM6SF2Q9BZW4 377 aa11.8□□□□□ -0.52
CHRNA1-207ENST00000435083 PLCB1Q9NQ66 1216 aa11.8□□□□□ -0.52
CHRNA1-207ENST00000435083 HECAQ9UBI9 543 aaPredicted RBP11.8□□□□□ -0.52
CHRNA1-207ENST00000435083 GGT7Q9UJ14 662 aa11.8□□□□□ -0.52
CHRNA1-207ENST00000435083 PADI4Q9UM07 663 aa11.8□□□□□ -0.52
CHRNA1-207ENST00000435083 ITM2BQ9Y287 266 aa11.8□□□□□ -0.52
CHRNA1-207ENST00000435083 PAXBP1Q9Y5B6 917 aa11.8□□□□□ -0.52
CHRNA1-207ENST00000435083 ACTL7AQ9Y615 435 aa11.8□□□□□ -0.52
CHRNA1-207ENST00000435083 TENM4Q6N022 2769 aa11.8□□□□□ -0.52
CHRNA1-207ENST00000435083 C16orf96A6NNT2 1141 aa11.79□□□□□ -0.52
CHRNA1-207ENST00000435083 ZMPSTE24O75844 475 aa11.79□□□□□ -0.52
CHRNA1-207ENST00000435083 GKP32189 559 aa11.79□□□□□ -0.52
CHRNA1-207ENST00000435083 MLLT3P42568 568 aaPredicted RBP11.79□□□□□ -0.52
CHRNA1-207ENST00000435083 ABL2P42684 1182 aa11.79□□□□□ -0.52
CHRNA1-207ENST00000435083 NFATC3Q12968 1075 aa11.79□□□□□ -0.52
CHRNA1-207ENST00000435083 PAK1Q13153 545 aa11.79□□□□□ -0.52
CHRNA1-207ENST00000435083 PTK2BQ14289 1009 aa11.79□□□□□ -0.52
CHRNA1-207ENST00000435083 ARL13BQ3SXY8 428 aa11.79□□□□□ -0.52
CHRNA1-207ENST00000435083 C6orf132Q5T0Z8 1188 aa11.79□□□□□ -0.52
CHRNA1-207ENST00000435083 ESRP1Q6NXG1 681 aaKnown RBP11.79□□□□□ -0.52
CHRNA1-207ENST00000435083 CLEC14AQ86T13 490 aa11.79□□□□□ -0.52
CHRNA1-207ENST00000435083 DENND6BQ8NEG7 585 aa11.79□□□□□ -0.52
CHRNA1-207ENST00000435083 OR6K2Q8NGY2 324 aa11.79□□□□□ -0.52
CHRNA1-207ENST00000435083 WDR48Q8TAF3 677 aa11.79□□□□□ -0.52
CHRNA1-207ENST00000435083 ASB12Q8WXK4 309 aa11.79□□□□□ -0.52
CHRNA1-207ENST00000435083 SHC3Q92529 594 aa11.79□□□□□ -0.52
CHRNA1-207ENST00000435083 RAB7BQ96AH8 199 aa11.79□□□□□ -0.52
CHRNA1-207ENST00000435083 PGAP3Q96FM1 320 aaPredicted RBP11.79□□□□□ -0.52
CHRNA1-207ENST00000435083 CCDC3Q9BQI4 270 aa11.79□□□□□ -0.52
CHRNA1-207ENST00000435083 SLC13A1Q9BZW2 595 aa11.79□□□□□ -0.52
CHRNA1-207ENST00000435083 FAM117AQ9C073 453 aa11.79□□□□□ -0.52
CHRNA1-207ENST00000435083 GULP1Q9UBP9 304 aa11.79□□□□□ -0.52
CHRNA1-207ENST00000435083 APEX2Q9UBZ4 518 aa11.79□□□□□ -0.52
CHRNA1-207ENST00000435083 HEMK1Q9Y5R4 338 aaPredicted RBP11.79□□□□□ -0.52
CHRNA1-207ENST00000435083 RP1P56715 2156 aa11.79□□□□□ -0.52
CHRNA1-207ENST00000435083 IGLV3-10A0A075B6K4 115 aa11.79□□□□□ -0.52
CHRNA1-207ENST00000435083 FAM170AA1A519 330 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms