RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 ZNF236Q9UL36 1845 aa5.65□□□□□ -1.51
RFC3-202ENST00000434425 MYH8P13535 1937 aa5.65□□□□□ -1.51
RFC3-202ENST00000434425 SERTM2A0A1B0GWG4 89 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 A0A1W2PQ27 194 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 A0A1W2PQ64 194 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 A0A1W2PQD8 194 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 TCRBV16S1A1N1A0A5B0 115 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 AHRRA9YTQ3 701 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 KIF28PB7ZC32 967 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 SMIM22K7EJ46 135 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 DDX3XO00571 662 aaKnown RBP eCLIP5.64□□□□□ -1.511e-11■■□□□ 12.4
RFC3-202ENST00000434425 TRIM38O00635 465 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 MEIS2O14770 477 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 EFSO43281 561 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 ATP8B1O43520 1251 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 CCNT1O60563 726 aaKnown RBP5.64□□□□□ -1.51
RFC3-202ENST00000434425 MMP20O60882 483 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 RBBP9O75884 186 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 PRAMEF12O95522 483 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 LMNAP02545 664 aaKnown RBP5.64□□□□□ -1.51
RFC3-202ENST00000434425 CSF2P04141 144 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 CYP1A1P04798 512 aaPredicted RBP5.64□□□□□ -1.51
RFC3-202ENST00000434425 FYNP06241 537 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 ARP10275 920 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 ACRP10323 421 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 PRPS2P11908 318 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 FCER1AP12319 257 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 CCDC130P13994 396 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 ACPPP15309 386 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 CTRB1P17538 263 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 ADCY8P40145 1251 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 ADKP55263 362 aaKnown RBP5.64□□□□□ -1.51
RFC3-202ENST00000434425 NPEPPSP55786 919 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 HNRNPH2P55795 449 aaKnown RBP5.64□□□□□ -1.51
RFC3-202ENST00000434425 OCRLQ01968 901 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 PTSQ03393 145 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 UBE3AQ05086 875 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 TRA2AQ13595 282 aaKnown RBP eCLIP5.64□□□□□ -1.51
RFC3-202ENST00000434425 ADGRE1Q14246 886 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 CASP8Q14790 479 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 KCNA10Q16322 511 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 CYP2A13Q16696 494 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 CLEC16AQ2KHT3 1053 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.64□□□□□ -1.514e-6■■■□□ 16.4
RFC3-202ENST00000434425 HFEQ30201 348 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 CCDC153Q494R4 210 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 ANO6Q4KMQ2 910 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 SLC9B1Q4ZJI4 515 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 LRRC23Q53EV4 343 aaPredicted RBP5.64□□□□□ -1.51
RFC3-202ENST00000434425 ZNF805Q5CZA5 627 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 SPATA46Q5T0L3 261 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 ATXN7L2Q5T6C5 722 aaPredicted RBP5.64□□□□□ -1.51
RFC3-202ENST00000434425 SAMD5Q5TGI4 173 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 PEAR1Q5VY43 1037 aaPredicted RBP5.64□□□□□ -1.51
RFC3-202ENST00000434425 CTRB2Q6GPI1 263 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 FAM171BQ6P995 826 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 KLHL24Q6TFL4 600 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 RIPOR1Q6ZS17 1223 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 UBE2R2Q712K3 238 aaPredicted RBP5.64□□□□□ -1.51
RFC3-202ENST00000434425 ANKRD33Q7Z3H0 272 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 GPR149Q86SP6 731 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 CLEC10AQ8IUN9 316 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 LRRC34Q8IZ02 419 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 ABRAQ8N0Z2 381 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 ADSSL1Q8N142 457 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 ARFGAP2Q8N6H7 521 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 SLC44A5Q8NCS7 719 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 ENGASEQ8NFI3 743 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 VPS33AQ96AX1 596 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 ATG4CQ96DT6 458 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 TOX2Q96NM4 488 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 RPRD1AQ96P16 312 aaPredicted RBP5.64□□□□□ -1.51
RFC3-202ENST00000434425 TM9SF2Q99805 663 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 EDEM2Q9BV94 578 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 PITHD1Q9GZP4 211 aaPredicted RBP5.64□□□□□ -1.51
RFC3-202ENST00000434425 CBX8Q9HC52 389 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 EIF2B3Q9NR50 452 aaKnown RBP5.64□□□□□ -1.51
RFC3-202ENST00000434425 SOHLH2Q9NX45 425 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 PAQR5Q9NXK6 330 aaPredicted RBP5.64□□□□□ -1.51
RFC3-202ENST00000434425 WWOXQ9NZC7 414 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 TRPS1Q9UHF7 1281 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 ADAMTS5Q9UNA0 930 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 MYH7P12883 1935 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 BAZ2AQ9UIF9 1905 aaKnown RBP5.64□□□□□ -1.51
RFC3-202ENST00000434425 PTPDC1A2A3K4 754 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 SH3D21A4FU49 640 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 SLC35F4A4IF30 521 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 POM121BA6NF01 834 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 MEIS3P2A8K0S8 358 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 KHNYNO15037 678 aaKnown RBP5.64□□□□□ -1.51
RFC3-202ENST00000434425 FOXP2O15409 715 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 RRP8O43159 456 aaKnown RBP5.64□□□□□ -1.51
RFC3-202ENST00000434425 NUDT21O43809 227 aaKnown RBP5.64□□□□□ -1.51
RFC3-202ENST00000434425 SCAF4O95104 1147 aaKnown RBP5.64□□□□□ -1.51
RFC3-202ENST00000434425 SNAI1O95863 264 aaPredicted RBP5.64□□□□□ -1.51
RFC3-202ENST00000434425 TPOP07202 933 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 FESP07332 822 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 CYP2D6P10635 497 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 KRT3P12035 628 aa5.64□□□□□ -1.51
RFC3-202ENST00000434425 KRT5P13647 590 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms