RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 UVRAGQ9P2Y5 699 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 SERGEFQ9UGK8 458 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 EIF2B4Q9UI10 523 aaKnown RBP5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 PPM1HQ9ULR3 514 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 NOVA2Q9UNW9 492 aaKnown RBP5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 NEU3Q9UQ49 428 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 MFHAS1Q9Y4C4 1052 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 CHD5Q8TDI0 1954 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 DOCK9Q9BZ29 2069 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 WASH4PA8MWX3 477 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 H3BRJ5 948 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 LILRA1O75019 489 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 LEFTY1O75610 366 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 MAP3K6O95382 1288 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 SEMA4FO95754 770 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 CFIP05156 583 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 ZNF806P0C7X5 589 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 TIMP2P16035 220 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 C5AR1P21730 350 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 COMTP21964 271 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 KDELR1P24390 212 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 IL4RP24394 825 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 MAT2AP31153 395 aaKnown RBP5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 CYLC1P35663 651 aaPredicted RBP5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 ARHGAP25P42331 645 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 HCAR3P49019 387 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 SERPINH1P50454 418 aaKnown RBP5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 YBEYP58557 167 aaPredicted RBP5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 RHOAP61586 193 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 SLC25A11Q02978 314 aaKnown RBP5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 ZBTB16Q05516 673 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 SLC20A2Q08357 652 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 CNTN1Q12860 1018 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 SFSWAPQ12872 951 aaKnown RBP5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 SERINC3Q13530 473 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 ELAVL3Q14576 367 aaKnown RBP5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 LLGL1Q15334 1064 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 CYTH1Q15438 398 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 CSRP2Q16527 193 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 RSPO4Q2I0M5 234 aaPredicted RBP5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 TTC31Q49AM3 519 aaPredicted RBP5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 AASDHQ4L235 1098 aaPredicted RBP5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 ANKRD20A8PQ5CZ79 823 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 TRIM61Q5EBN2 209 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 WDR45BQ5MNZ6 344 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 FAM182AQ5T1J6 154 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 SYCP2LQ5T4T6 812 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 ATXN7L2Q5T6C5 722 aaPredicted RBP5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 FAM46CQ5VWP2 391 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 C22orf39Q6P5X5 142 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 TMCO3Q6UWJ1 677 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 PRR23CQ6ZRP0 262 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 POLNQ7Z5Q5 900 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 SYT12Q8IV01 421 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 ANKMY2Q8IV38 441 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 UMODL1-AS1Q8N2C9 162 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 GPR161Q8N6U8 529 aaKnown RBP5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 NPWQ8N729 165 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 NIPA2Q8N8Q9 360 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 ACRBPQ8NEB7 543 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 TPCN2Q8NHX9 752 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 GRIN3AQ8TCU5 1115 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 KLK6Q92876 244 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 ARRDC3Q96B67 414 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 BIRC7Q96CA5 298 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 EXOC2Q96KP1 924 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 PANX2Q96RD6 677 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 HEPHQ9BQS7 1158 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 GTPBP2Q9BX10 602 aaKnown RBP5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 GOLPH3Q9H4A6 298 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 RETREG1Q9H6L5 497 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 LRRC19Q9H756 370 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 PCDH18Q9HCL0 1135 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 VPS45Q9NRW7 570 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 ETNK2Q9NVF9 386 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 IL36AQ9UHA7 158 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 EVLQ9UI08 416 aaPredicted RBP5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 PILRBQ9UKJ0 227 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 HS3ST2Q9Y278 367 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 DUSP10Q9Y6W6 482 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 PLXNA2O75051 1894 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 A0A0C4DFX4 3053 aa5.87□□□□□ -1.47
HMGB3P24-201ENST00000433260 SPAG17Q6Q759 2223 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 ANKRD36A6QL64 1941 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 A0A0U1RQJ8 604 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 ARHGAP42A6NI28 874 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 LRRC72A6NJI9 287 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 EIF3CLB5ME19 914 aaKnown RBP5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 C1QTNF3-AMACRE9PGA6 284 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 KCNK3O14649 394 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 WNT9AO14904 365 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 INSIG1O15503 277 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 GJB3O75712 270 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 PALMO75781 387 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 PCDH8O95206 1070 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 NDUFA10O95299 355 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 LCA5LO95447 670 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 POP4O95707 220 aaKnown RBP5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 KRT7P08729 469 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 ITIH2P19823 946 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms