RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 MAPKAPK2P49137 400 aa11.99□□□□□ -0.49
HDAC4-202ENST00000430200 DNA2P51530 1060 aa11.99□□□□□ -0.49
HDAC4-202ENST00000430200 NEK3P51956 506 aa11.99□□□□□ -0.49
HDAC4-202ENST00000430200 SUZ12Q15022 739 aaKnown RBP11.99□□□□□ -0.49
HDAC4-202ENST00000430200 ZNF542PQ5EBM4 170 aa11.99□□□□□ -0.49
HDAC4-202ENST00000430200 CARD16Q5EG05 197 aa11.99□□□□□ -0.49
HDAC4-202ENST00000430200 DNAJC24Q6P3W2 148 aa11.99□□□□□ -0.49
HDAC4-202ENST00000430200 SASS6Q6UVJ0 657 aa11.99□□□□□ -0.49
HDAC4-202ENST00000430200 LRSAM1Q6UWE0 723 aa11.99□□□□□ -0.49
HDAC4-202ENST00000430200 IQCHQ86VS3 1027 aa11.99□□□□□ -0.49
HDAC4-202ENST00000430200 HMCESQ96FZ2 354 aa11.99□□□□□ -0.49
HDAC4-202ENST00000430200 EXOC2Q96KP1 924 aa11.99□□□□□ -0.49
HDAC4-202ENST00000430200 BMFQ96LC9 184 aa11.99□□□□□ -0.49
HDAC4-202ENST00000430200 PCMTD1Q96MG8 357 aaPredicted RBP11.99□□□□□ -0.49
HDAC4-202ENST00000430200 GBP4Q96PP9 640 aa11.99□□□□□ -0.49
HDAC4-202ENST00000430200 FUCA2Q9BTY2 467 aa11.99□□□□□ -0.49
HDAC4-202ENST00000430200 SELENOOQ9BVL4 669 aa11.99□□□□□ -0.49
HDAC4-202ENST00000430200 TTYH3Q9C0H2 523 aa11.99□□□□□ -0.49
HDAC4-202ENST00000430200 SEPT11Q9NVA2 429 aaKnown RBP11.99□□□□□ -0.49
HDAC4-202ENST00000430200 LHX3Q9UBR4 397 aa11.99□□□□□ -0.49
HDAC4-202ENST00000430200 KLF15Q9UIH9 416 aa11.99□□□□□ -0.49
HDAC4-202ENST00000430200 URB1O60287 2271 aaKnown RBP11.98□□□□□ -0.49
HDAC4-202ENST00000430200 ZFC3H1O60293 1989 aaKnown RBP11.98□□□□□ -0.49
HDAC4-202ENST00000430200 TRABD2BA6NFA1 517 aa11.98□□□□□ -0.49
HDAC4-202ENST00000430200 LRRC53A6NM62 1247 aa11.98□□□□□ -0.49
HDAC4-202ENST00000430200 SIGLEC16A6NMB1 481 aa11.98□□□□□ -0.49
HDAC4-202ENST00000430200 INSIG1O15503 277 aa11.98□□□□□ -0.49
HDAC4-202ENST00000430200 FFAR2O15552 330 aa11.98□□□□□ -0.49
HDAC4-202ENST00000430200 SIGLEC6O43699 453 aa11.98□□□□□ -0.49
HDAC4-202ENST00000430200 DFNA5O60443 496 aa11.98□□□□□ -0.49
HDAC4-202ENST00000430200 RAMP2O60895 175 aa11.98□□□□□ -0.49
HDAC4-202ENST00000430200 RFPL3O75679 317 aa11.98□□□□□ -0.49
HDAC4-202ENST00000430200 LDOC1O95751 146 aaPredicted RBP11.98□□□□□ -0.49
HDAC4-202ENST00000430200 UGT2B4P06133 528 aa11.98□□□□□ -0.49
HDAC4-202ENST00000430200 HNRNPA2B1P22626 353 aaKnown RBP11.98□□□□□ -0.49
HDAC4-202ENST00000430200 L1CAMP32004 1257 aa11.98□□□□□ -0.49
HDAC4-202ENST00000430200 ARRB1P49407 418 aaPredicted RBP11.98□□□□□ -0.49
HDAC4-202ENST00000430200 ZNF143P52747 638 aaPredicted RBP11.98□□□□□ -0.49
HDAC4-202ENST00000430200 RETSATQ6NUM9 610 aa11.98□□□□□ -0.49
HDAC4-202ENST00000430200 FBXL19Q6PCT2 694 aa11.98□□□□□ -0.49
HDAC4-202ENST00000430200 C19orf48Q6RUI8 117 aa11.98□□□□□ -0.49
HDAC4-202ENST00000430200 MCOLN2Q8IZK6 566 aa11.98□□□□□ -0.49
HDAC4-202ENST00000430200 RTL3Q8N8U3 475 aaKnown RBP11.98□□□□□ -0.49
HDAC4-202ENST00000430200 CCDC114Q96M63 670 aa11.98□□□□□ -0.49
HDAC4-202ENST00000430200 PPP1R9BQ96SB3 815 aa11.98□□□□□ -0.49
HDAC4-202ENST00000430200 HEPHQ9BQS7 1158 aa11.98□□□□□ -0.49
HDAC4-202ENST00000430200 CALN1Q9BXU9 219 aa11.98□□□□□ -0.49
HDAC4-202ENST00000430200 CCDC86Q9H6F5 360 aaKnown RBP11.98□□□□□ -0.49
HDAC4-202ENST00000430200 PDFQ9HBH1 243 aa11.98□□□□□ -0.49
HDAC4-202ENST00000430200 HECAQ9UBI9 543 aaPredicted RBP11.98□□□□□ -0.49
HDAC4-202ENST00000430200 FZD10Q9ULW2 581 aa11.98□□□□□ -0.49
HDAC4-202ENST00000430200 DAAM1Q9Y4D1 1078 aa11.98□□□□□ -0.49
HDAC4-202ENST00000430200 C16orf96A6NNT2 1141 aa11.97□□□□□ -0.49
HDAC4-202ENST00000430200 TMCO5BA8MYB1 307 aa11.97□□□□□ -0.49
HDAC4-202ENST00000430200 KRIT1O00522 736 aa11.97□□□□□ -0.49
HDAC4-202ENST00000430200 AREL1O15033 823 aa11.97□□□□□ -0.49
HDAC4-202ENST00000430200 PIAS2O75928 621 aa11.97□□□□□ -0.49
HDAC4-202ENST00000430200 NEBLO76041 1014 aa11.97□□□□□ -0.49
HDAC4-202ENST00000430200 PCDH8O95206 1070 aa11.97□□□□□ -0.49
HDAC4-202ENST00000430200 CALB1P05937 261 aa11.97□□□□□ -0.49
HDAC4-202ENST00000430200 TCF4P15884 667 aa11.97□□□□□ -0.49
HDAC4-202ENST00000430200 DGKAP23743 735 aa11.97□□□□□ -0.49
HDAC4-202ENST00000430200 IGFALSP35858 605 aa11.97□□□□□ -0.49
HDAC4-202ENST00000430200 RGRP47804 291 aa11.97□□□□□ -0.49
HDAC4-202ENST00000430200 CYP4F3Q08477 520 aa11.97□□□□□ -0.49
HDAC4-202ENST00000430200 MAPK8IP2Q13387 824 aaPredicted RBP11.97□□□□□ -0.49
HDAC4-202ENST00000430200 FZD2Q14332 565 aa11.97□□□□□ -0.49
HDAC4-202ENST00000430200 STAT4Q14765 748 aa11.97□□□□□ -0.49
HDAC4-202ENST00000430200 INAVAQ3KP66 663 aa11.97□□□□□ -0.49
HDAC4-202ENST00000430200 HES3Q5TGS1 186 aa11.97□□□□□ -0.49
HDAC4-202ENST00000430200 KCTD16Q68DU8 428 aa11.97□□□□□ -0.49
HDAC4-202ENST00000430200 KYAT3Q6YP21 454 aaKnown RBP11.97□□□□□ -0.49
HDAC4-202ENST00000430200 PTAR1Q7Z6K3 402 aaPredicted RBP11.97□□□□□ -0.49
HDAC4-202ENST00000430200 SLFN11Q7Z7L1 901 aa11.97□□□□□ -0.49
HDAC4-202ENST00000430200 ZSWIM9Q86XI8 627 aa11.97□□□□□ -0.49
HDAC4-202ENST00000430200 TP53INP2Q8IXH6 220 aa11.97□□□□□ -0.49
HDAC4-202ENST00000430200 NPWQ8N729 165 aa11.97□□□□□ -0.49
HDAC4-202ENST00000430200 OR2AP1Q8NGE2 309 aa11.97□□□□□ -0.49
HDAC4-202ENST00000430200 FUBP1Q96AE4 644 aaKnown RBP11.97□□□□□ -0.49
HDAC4-202ENST00000430200 KLHDC7BQ96G42 594 aa11.97□□□□□ -0.49
HDAC4-202ENST00000430200 NSMCE3Q96MG7 304 aa11.97□□□□□ -0.49
HDAC4-202ENST00000430200 NAP1L5Q96NT1 182 aaPredicted RBP11.97□□□□□ -0.49
HDAC4-202ENST00000430200 TCEAL2Q9H3H9 227 aaPredicted RBP11.97□□□□□ -0.49
HDAC4-202ENST00000430200 RTN4Q9NQC3 1192 aaKnown RBP11.97□□□□□ -0.49
HDAC4-202ENST00000430200 DYRK4Q9NR20 520 aa11.97□□□□□ -0.49
HDAC4-202ENST00000430200 TPX2Q9ULW0 747 aaKnown RBP11.97□□□□□ -0.49
HDAC4-202ENST00000430200 LHX6Q9UPM6 363 aa11.97□□□□□ -0.49
HDAC4-202ENST00000430200 MFHAS1Q9Y4C4 1052 aa11.97□□□□□ -0.49
HDAC4-202ENST00000430200 IGLON5A6NGN9 336 aa11.96□□□□□ -0.49
HDAC4-202ENST00000430200 RASA4BC9J798 803 aa11.96□□□□□ -0.49
HDAC4-202ENST00000430200 YKT6O15498 198 aa11.96□□□□□ -0.49
HDAC4-202ENST00000430200 RASA4O43374 803 aa11.96□□□□□ -0.49
HDAC4-202ENST00000430200 KDELR3O43731 214 aa11.96□□□□□ -0.49
HDAC4-202ENST00000430200 AP1G1O43747 822 aa11.96□□□□□ -0.49
HDAC4-202ENST00000430200 CREB3O43889 395 aa11.96□□□□□ -0.49
HDAC4-202ENST00000430200 PIGNO95427 931 aa11.96□□□□□ -0.49
HDAC4-202ENST00000430200 PAK4O96013 591 aaPredicted RBP11.96□□□□□ -0.49
HDAC4-202ENST00000430200 GSRP00390 522 aa11.96□□□□□ -0.49
HDAC4-202ENST00000430200 TPM2P07951 284 aa11.96□□□□□ -0.49
HDAC4-202ENST00000430200 EPHB2P29323 1055 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms