RNA–Protein interactions for RNA: ENST00000429163.6

PDE6B-202, Transcript of phosphodiesterase 6B, humanhuman

TSL 2 BASIC

Gene PDE6B, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-202ENST00000429163 GPR78Q96P69 363 aa18.82■□□□□ 0.6
PDE6B-202ENST00000429163 FICDQ9BVA6 458 aa18.82■□□□□ 0.6
PDE6B-202ENST00000429163 ZFYVE28Q9HCC9 887 aa18.82■□□□□ 0.6
PDE6B-202ENST00000429163 ATP13A1Q9HD20 1204 aa18.82■□□□□ 0.6
PDE6B-202ENST00000429163 RBM22Q9NW64 420 aaKnown RBP eCLIP18.82■□□□□ 0.6
PDE6B-202ENST00000429163 UBP1Q9NZI7 540 aa18.82■□□□□ 0.6
PDE6B-202ENST00000429163 NCKIPSDQ9NZQ3 722 aa18.82■□□□□ 0.6
PDE6B-202ENST00000429163 PDP2Q9P2J9 529 aa18.82■□□□□ 0.6
PDE6B-202ENST00000429163 STK39Q9UEW8 545 aa18.82■□□□□ 0.6
PDE6B-202ENST00000429163 CDYLQ9Y232 598 aa18.82■□□□□ 0.6
PDE6B-202ENST00000429163 POMPQ9Y244 141 aa18.82■□□□□ 0.6
PDE6B-202ENST00000429163 TLR6Q9Y2C9 796 aa18.82■□□□□ 0.6
PDE6B-202ENST00000429163 MEI4A8MW99 385 aa18.81■□□□□ 0.6
PDE6B-202ENST00000429163 CASQ2O14958 399 aaPredicted RBP18.81■□□□□ 0.6
PDE6B-202ENST00000429163 PENKP01210 267 aaPredicted RBP18.81■□□□□ 0.6
PDE6B-202ENST00000429163 PPARGP37231 505 aaPredicted RBP18.81■□□□□ 0.6
PDE6B-202ENST00000429163 CUL3Q13618 768 aa18.81■□□□□ 0.6
PDE6B-202ENST00000429163 SLC14A2Q15849 920 aa18.81■□□□□ 0.6
PDE6B-202ENST00000429163 ARL13AQ5H913 290 aaPredicted RBP18.81■□□□□ 0.6
PDE6B-202ENST00000429163 TMEM154Q6P9G4 183 aa18.81■□□□□ 0.6
PDE6B-202ENST00000429163 LRRTM3Q86VH5 581 aa18.81■□□□□ 0.6
PDE6B-202ENST00000429163 MON1AQ86VX9 555 aa18.81■□□□□ 0.6
PDE6B-202ENST00000429163 RASAL3Q86YV0 1011 aa18.81■□□□□ 0.6
PDE6B-202ENST00000429163 PHTF2Q8N3S3 785 aa18.81■□□□□ 0.6
PDE6B-202ENST00000429163 SPATA22Q8NHS9 363 aa18.81■□□□□ 0.6
PDE6B-202ENST00000429163 MAPK15Q8TD08 544 aa18.81■□□□□ 0.6
PDE6B-202ENST00000429163 TSPAN17Q96FV3 270 aa18.81■□□□□ 0.6
PDE6B-202ENST00000429163 RHOBTB2Q9BYZ6 727 aa18.81■□□□□ 0.6
PDE6B-202ENST00000429163 SIK2Q9H0K1 926 aa18.81■□□□□ 0.6
PDE6B-202ENST00000429163 FBXO44Q9H4M3 255 aa18.81■□□□□ 0.6
PDE6B-202ENST00000429163 SCML2Q9UQR0 700 aa18.81■□□□□ 0.6
PDE6B-202ENST00000429163 E9PAM4 449 aa18.8■□□□□ 0.6
PDE6B-202ENST00000429163 TK2O00142 265 aa18.8■□□□□ 0.6
PDE6B-202ENST00000429163 BUD23O43709 281 aaKnown RBP18.8■□□□□ 0.6
PDE6B-202ENST00000429163 VAPBO95292 243 aa18.8■□□□□ 0.6
PDE6B-202ENST00000429163 PIGNO95427 931 aa18.8■□□□□ 0.6
PDE6B-202ENST00000429163 CTSHP09668 335 aa18.8■□□□□ 0.6
PDE6B-202ENST00000429163 ATP5F1P24539 256 aaPredicted RBP18.8■□□□□ 0.6
PDE6B-202ENST00000429163 ARNTP27540 789 aa18.8■□□□□ 0.6
PDE6B-202ENST00000429163 BRCC3P46736 316 aa18.8■□□□□ 0.6
PDE6B-202ENST00000429163 TUBP50607 506 aa18.8■□□□□ 0.6
PDE6B-202ENST00000429163 CLCN5P51795 746 aa18.8■□□□□ 0.6
PDE6B-202ENST00000429163 YWHAHQ04917 246 aaPredicted RBP18.8■□□□□ 0.6
PDE6B-202ENST00000429163 CXCL17Q6UXB2 119 aa18.8■□□□□ 0.6
PDE6B-202ENST00000429163 CTU1Q7Z7A3 348 aaKnown RBP18.8■□□□□ 0.6
PDE6B-202ENST00000429163 DCP1BQ8IZD4 617 aaKnown RBP18.8■□□□□ 0.6
PDE6B-202ENST00000429163 AFAP1L2Q8N4X5 818 aa18.8■□□□□ 0.6
PDE6B-202ENST00000429163 TRPV1Q8NER1 839 aa18.8■□□□□ 0.6
PDE6B-202ENST00000429163 MAELQ96JY0 434 aaKnown RBP18.8■□□□□ 0.6
PDE6B-202ENST00000429163 SCYL1Q96KG9 808 aa18.8■□□□□ 0.6
PDE6B-202ENST00000429163 MRGPRX2Q96LB1 330 aa18.8■□□□□ 0.6
PDE6B-202ENST00000429163 CLIC5Q9NZA1 410 aa18.8■□□□□ 0.6
PDE6B-202ENST00000429163 CPSF2Q9P2I0 782 aaKnown RBP18.8■□□□□ 0.6
PDE6B-202ENST00000429163 GRID2O43424 1007 aa18.8■□□□□ 0.6
PDE6B-202ENST00000429163 NEBLO76041 1014 aa18.8■□□□□ 0.6
PDE6B-202ENST00000429163 MT-CYBP00156 380 aaPredicted RBP18.8■□□□□ 0.6
PDE6B-202ENST00000429163 HLA-DQB2P05538 268 aa18.8■□□□□ 0.6
PDE6B-202ENST00000429163 RHOQP17081 205 aa18.8■□□□□ 0.6
PDE6B-202ENST00000429163 PIK3R1P27986 724 aa18.8■□□□□ 0.6
PDE6B-202ENST00000429163 CLCN2P51788 898 aa18.8■□□□□ 0.6
PDE6B-202ENST00000429163 NSUN2Q08J23 767 aaKnown RBP eCLIP18.8■□□□□ 0.6
PDE6B-202ENST00000429163 LAMB3Q13751 1172 aa18.8■□□□□ 0.6
PDE6B-202ENST00000429163 CCNIQ14094 377 aa18.8■□□□□ 0.6
PDE6B-202ENST00000429163 POU6F1Q14863 301 aa18.8■□□□□ 0.6
PDE6B-202ENST00000429163 NFE2Q16621 373 aaPredicted RBP18.8■□□□□ 0.6
PDE6B-202ENST00000429163 RALGPS1Q5JS13 557 aa18.8■□□□□ 0.6
PDE6B-202ENST00000429163 ESRP1Q6NXG1 681 aaKnown RBP18.8■□□□□ 0.6
PDE6B-202ENST00000429163 SCD5Q86SK9 330 aa18.8■□□□□ 0.6
PDE6B-202ENST00000429163 KBTBD6Q86V97 674 aa18.8■□□□□ 0.6
PDE6B-202ENST00000429163 KYQ8NBH2 561 aa18.8■□□□□ 0.6
PDE6B-202ENST00000429163 ACVR1CQ8NER5 493 aa18.8■□□□□ 0.6
PDE6B-202ENST00000429163 SCAMP5Q8TAC9 235 aa18.8■□□□□ 0.6
PDE6B-202ENST00000429163 KCTD4Q8WVF5 259 aa18.8■□□□□ 0.6
PDE6B-202ENST00000429163 PEX13Q92968 403 aa18.8■□□□□ 0.6
PDE6B-202ENST00000429163 SLC39A13Q96H72 371 aa18.8■□□□□ 0.6
PDE6B-202ENST00000429163 C8orf48Q96LL4 319 aa18.8■□□□□ 0.6
PDE6B-202ENST00000429163 LENG8Q96PV6 779 aaPredicted RBP18.8■□□□□ 0.6
PDE6B-202ENST00000429163 TTC1Q99614 292 aa18.8■□□□□ 0.6
PDE6B-202ENST00000429163 OXCT2Q9BYC2 517 aaPredicted RBP18.8■□□□□ 0.6
PDE6B-202ENST00000429163 TRPC7Q9HCX4 862 aa18.8■□□□□ 0.6
PDE6B-202ENST00000429163 FBXO5Q9UKT4 447 aa18.8■□□□□ 0.6
PDE6B-202ENST00000429163 PPM1HQ9ULR3 514 aa18.8■□□□□ 0.6
PDE6B-202ENST00000429163 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.79■□□□□ 0.6
PDE6B-202ENST00000429163 DPPA5A6NC42 116 aa18.79■□□□□ 0.6
PDE6B-202ENST00000429163 E9PBE3 544 aa18.79■□□□□ 0.6
PDE6B-202ENST00000429163 KLHL41O60662 606 aa18.79■□□□□ 0.6
PDE6B-202ENST00000429163 PDHA1P08559 390 aa18.79■□□□□ 0.6
PDE6B-202ENST00000429163 HOXB8P17481 243 aaPredicted RBP18.79■□□□□ 0.6
PDE6B-202ENST00000429163 CD52P31358 61 aa18.79■□□□□ 0.6
PDE6B-202ENST00000429163 GRIK1P39086 918 aa18.79■□□□□ 0.6
PDE6B-202ENST00000429163 NAGLUP54802 743 aa18.79■□□□□ 0.6
PDE6B-202ENST00000429163 SLC12A2P55011 1212 aa18.79■□□□□ 0.6
PDE6B-202ENST00000429163 HUNKP57058 714 aa18.79■□□□□ 0.6
PDE6B-202ENST00000429163 BTG3Q14201 252 aaPredicted RBP18.79■□□□□ 0.6
PDE6B-202ENST00000429163 LSM12Q3MHD2 195 aaKnown RBP18.79■□□□□ 0.6
PDE6B-202ENST00000429163 ZFP1Q6P2D0 407 aa18.79■□□□□ 0.6
PDE6B-202ENST00000429163 KDELC1Q6UW63 502 aa18.79■□□□□ 0.6
PDE6B-202ENST00000429163 ARHGAP36Q6ZRI8 547 aa18.79■□□□□ 0.6
PDE6B-202ENST00000429163 ZNF598Q86UK7 904 aaKnown RBP18.79■□□□□ 0.6
PDE6B-202ENST00000429163 SLC41A1Q8IVJ1 513 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms