RNA–Protein interactions for RNA: ENST00000428983.2

PCDH8P1-201, Transcript of protocadherin 8 pseudogene 1, humanhuman

BASIC

Gene PCDH8P1, Length 2,773 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8P1-201ENST00000428983 SEMA5AQ13591 1074 aa17.1■□□□□ 0.33
PCDH8P1-201ENST00000428983 USP41Q3LFD5 358 aa17.1■□□□□ 0.33
PCDH8P1-201ENST00000428983 C16orf89Q6UX73 402 aa17.1■□□□□ 0.33
PCDH8P1-201ENST00000428983 LPCAT2Q7L5N7 544 aa17.1■□□□□ 0.33
PCDH8P1-201ENST00000428983 KDELC2Q7Z4H8 507 aa17.1■□□□□ 0.33
PCDH8P1-201ENST00000428983 DDI1Q8WTU0 396 aa17.1■□□□□ 0.33
PCDH8P1-201ENST00000428983 PCED1BQ96HM7 432 aa17.1■□□□□ 0.33
PCDH8P1-201ENST00000428983 SLC29A1Q99808 456 aa17.1■□□□□ 0.33
PCDH8P1-201ENST00000428983 FAM96AQ9H5X1 160 aa17.1■□□□□ 0.33
PCDH8P1-201ENST00000428983 MORF4L1Q9UBU8 362 aa17.1■□□□□ 0.33
PCDH8P1-201ENST00000428983 MBLAC1A4D2B0 266 aaPredicted RBP17.09■□□□□ 0.33
PCDH8P1-201ENST00000428983 EEF2KO00418 725 aaKnown RBP17.09■□□□□ 0.33
PCDH8P1-201ENST00000428983 FUT4P22083 530 aa17.09■□□□□ 0.33
PCDH8P1-201ENST00000428983 SULT2A1Q06520 285 aa17.09■□□□□ 0.33
PCDH8P1-201ENST00000428983 ITPRIPL1Q6GPH6 555 aa17.09■□□□□ 0.33
PCDH8P1-201ENST00000428983 ZNF554Q86TJ5 538 aa17.09■□□□□ 0.33
PCDH8P1-201ENST00000428983 LRTOMTQ8WZ04 291 aa17.09■□□□□ 0.33
PCDH8P1-201ENST00000428983 SENP8Q96LD8 212 aa17.09■□□□□ 0.33
PCDH8P1-201ENST00000428983 BLOC1S6Q9UL45 172 aa17.09■□□□□ 0.33
PCDH8P1-201ENST00000428983 PRPF19Q9UMS4 504 aaKnown RBP17.09■□□□□ 0.33
PCDH8P1-201ENST00000428983 CD4P01730 458 aa17.09■□□□□ 0.33
PCDH8P1-201ENST00000428983 ZNF865P0CJ78 1059 aaPredicted RBP17.09■□□□□ 0.33
PCDH8P1-201ENST00000428983 HOXD8P13378 290 aaPredicted RBP17.09■□□□□ 0.33
PCDH8P1-201ENST00000428983 ME2P23368 584 aa17.09■□□□□ 0.33
PCDH8P1-201ENST00000428983 CERCAMQ5T4B2 595 aa17.09■□□□□ 0.33
PCDH8P1-201ENST00000428983 FAM219BQ5XKK7 198 aa17.09■□□□□ 0.33
PCDH8P1-201ENST00000428983 POTEHQ6S545 545 aa17.09■□□□□ 0.33
PCDH8P1-201ENST00000428983 CHERPQ8IWX8 916 aaKnown RBP17.09■□□□□ 0.33
PCDH8P1-201ENST00000428983 TTC39CQ8N584 583 aa17.09■□□□□ 0.33
PCDH8P1-201ENST00000428983 PCDH20Q8N6Y1 951 aaKnown RBP17.09■□□□□ 0.33
PCDH8P1-201ENST00000428983 ZMIZ2Q8NF64 920 aa17.09■□□□□ 0.33
PCDH8P1-201ENST00000428983 MFSD3Q96ES6 412 aa17.09■□□□□ 0.33
PCDH8P1-201ENST00000428983 SMOQ99835 787 aa17.09■□□□□ 0.33
PCDH8P1-201ENST00000428983 KLHL8Q9P2G9 620 aaPredicted RBP17.09■□□□□ 0.33
PCDH8P1-201ENST00000428983 FAF1Q9UNN5 650 aaPredicted RBP17.09■□□□□ 0.33
PCDH8P1-201ENST00000428983 TK2O00142 265 aa17.08■□□□□ 0.33
PCDH8P1-201ENST00000428983 COQ9O75208 318 aa17.08■□□□□ 0.33
PCDH8P1-201ENST00000428983 ADAM17P78536 824 aa17.08■□□□□ 0.33
PCDH8P1-201ENST00000428983 FSTL4Q6MZW2 842 aa17.08■□□□□ 0.33
PCDH8P1-201ENST00000428983 CXCL17Q6UXB2 119 aa17.08■□□□□ 0.33
PCDH8P1-201ENST00000428983 FNDC8Q8TC99 324 aa17.08■□□□□ 0.33
PCDH8P1-201ENST00000428983 IRGQQ8WZA9 623 aa17.08■□□□□ 0.33
PCDH8P1-201ENST00000428983 UPF1Q92900 1129 aaKnown RBP eCLIP17.08■□□□□ 0.33
PCDH8P1-201ENST00000428983 TMEM209Q96SK2 561 aa17.08■□□□□ 0.33
PCDH8P1-201ENST00000428983 DCUN1D5Q9BTE7 237 aa17.08■□□□□ 0.33
PCDH8P1-201ENST00000428983 DDIT4Q9NX09 232 aa17.08■□□□□ 0.33
PCDH8P1-201ENST00000428983 DERAQ9Y315 318 aa17.08■□□□□ 0.33
PCDH8P1-201ENST00000428983 A0A096LPK6 155 aa17.08■□□□□ 0.32
PCDH8P1-201ENST00000428983 ACOT8O14734 319 aa17.08■□□□□ 0.32
PCDH8P1-201ENST00000428983 PGK1P00558 417 aa17.08■□□□□ 0.32
PCDH8P1-201ENST00000428983 POMCP01189 267 aa17.08■□□□□ 0.32
PCDH8P1-201ENST00000428983 MAGEA8P43361 318 aa17.08■□□□□ 0.32
PCDH8P1-201ENST00000428983 GLRBP48167 497 aa17.08■□□□□ 0.32
PCDH8P1-201ENST00000428983 SCNN1GP51170 649 aa17.08■□□□□ 0.32
PCDH8P1-201ENST00000428983 ART3Q13508 389 aa17.08■□□□□ 0.32
PCDH8P1-201ENST00000428983 C16orf72Q14CZ0 275 aa17.08■□□□□ 0.32
PCDH8P1-201ENST00000428983 STRA8Q7Z7C7 330 aa17.08■□□□□ 0.32
PCDH8P1-201ENST00000428983 ZNF467Q7Z7K2 595 aaPredicted RBP17.08■□□□□ 0.32
PCDH8P1-201ENST00000428983 ZDHHC17Q8IUH5 632 aa17.08■□□□□ 0.32
PCDH8P1-201ENST00000428983 SNX31Q8N9S9 440 aa17.08■□□□□ 0.32
PCDH8P1-201ENST00000428983 TNIP3Q96KP6 325 aa17.08■□□□□ 0.32
PCDH8P1-201ENST00000428983 ZNF560Q96MR9 790 aa17.08■□□□□ 0.32
PCDH8P1-201ENST00000428983 NPY6RQ99463 290 aa17.08■□□□□ 0.32
PCDH8P1-201ENST00000428983 SIK2Q9H0K1 926 aa17.08■□□□□ 0.32
PCDH8P1-201ENST00000428983 TSPYL2Q9H2G4 693 aaPredicted RBP17.08■□□□□ 0.32
PCDH8P1-201ENST00000428983 C20orf96Q9NUD7 363 aaPredicted RBP17.08■□□□□ 0.32
PCDH8P1-201ENST00000428983 GDAP2Q9NXN4 497 aa17.08■□□□□ 0.32
PCDH8P1-201ENST00000428983 ADA2Q9NZK5 511 aa17.08■□□□□ 0.32
PCDH8P1-201ENST00000428983 ZDHHC2Q9UIJ5 367 aa17.08■□□□□ 0.32
PCDH8P1-201ENST00000428983 PCDHGA4Q9Y5G9 962 aa17.08■□□□□ 0.32
PCDH8P1-201ENST00000428983 ARHGEF37A1IGU5 675 aa17.07■□□□□ 0.32
PCDH8P1-201ENST00000428983 TMEM233B4DJY2 109 aa17.07■□□□□ 0.32
PCDH8P1-201ENST00000428983 MATN2O00339 956 aa17.07■□□□□ 0.32
PCDH8P1-201ENST00000428983 ZBTB24O43167 697 aaPredicted RBP17.07■□□□□ 0.32
PCDH8P1-201ENST00000428983 VARSP26640 1264 aaKnown RBP17.07■□□□□ 0.32
PCDH8P1-201ENST00000428983 PGFP49763 221 aa17.07■□□□□ 0.32
PCDH8P1-201ENST00000428983 SV2CQ496J9 727 aa17.07■□□□□ 0.32
PCDH8P1-201ENST00000428983 SPRYD7Q5W111 196 aa17.07■□□□□ 0.32
PCDH8P1-201ENST00000428983 ZFP1Q6P2D0 407 aa17.07■□□□□ 0.32
PCDH8P1-201ENST00000428983 BORAQ6PGQ7 559 aa17.07■□□□□ 0.32
PCDH8P1-201ENST00000428983 DNAAF3Q8N9W5 541 aa17.07■□□□□ 0.32
PCDH8P1-201ENST00000428983 FAM110BQ8TC76 370 aa17.07■□□□□ 0.32
PCDH8P1-201ENST00000428983 HSFY1Q96LI6 401 aa17.07■□□□□ 0.32
PCDH8P1-201ENST00000428983 EBF1Q9UH73 591 aa17.07■□□□□ 0.32
PCDH8P1-201ENST00000428983 GRID2O43424 1007 aa17.07■□□□□ 0.32
PCDH8P1-201ENST00000428983 TRIM13O60858 407 aa17.07■□□□□ 0.32
PCDH8P1-201ENST00000428983 BCAS2O75934 225 aaPredicted RBP17.07■□□□□ 0.32
PCDH8P1-201ENST00000428983 PIGNO95427 931 aa17.07■□□□□ 0.32
PCDH8P1-201ENST00000428983 PGAM1P18669 254 aa17.07■□□□□ 0.32
PCDH8P1-201ENST00000428983 HDCP19113 662 aa17.07■□□□□ 0.32
PCDH8P1-201ENST00000428983 GP5P40197 560 aa17.07■□□□□ 0.32
PCDH8P1-201ENST00000428983 CTBSQ01459 385 aa17.07■□□□□ 0.32
PCDH8P1-201ENST00000428983 INSCQ1MX18 579 aa17.07■□□□□ 0.32
PCDH8P1-201ENST00000428983 FAM110CQ1W6H9 321 aa17.07■□□□□ 0.32
PCDH8P1-201ENST00000428983 ARL13AQ5H913 290 aaPredicted RBP17.07■□□□□ 0.32
PCDH8P1-201ENST00000428983 ARHGAP36Q6ZRI8 547 aa17.07■□□□□ 0.32
PCDH8P1-201ENST00000428983 STRADAQ7RTN6 431 aa17.07■□□□□ 0.32
PCDH8P1-201ENST00000428983 CATSPER1Q8NEC5 780 aa17.07■□□□□ 0.32
PCDH8P1-201ENST00000428983 RP9Q8TA86 221 aaKnown RBP17.07■□□□□ 0.32
PCDH8P1-201ENST00000428983 LZICQ8WZA0 190 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms