RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 COLGALT1Q8NBJ5 622 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 ATL1Q8WXF7 558 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 ZNF689Q96CS4 500 aaPredicted RBP7.32□□□□□ -1.24
CNOT4-206ENST00000428680 ZBTB10Q96DT7 871 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 FCRL2Q96LA5 508 aaPredicted RBP7.32□□□□□ -1.24
CNOT4-206ENST00000428680 DPYSL5Q9BPU6 564 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 PRKD2Q9BZL6 878 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 DDX47Q9H0S4 455 aaKnown RBP7.32□□□□□ -1.24
CNOT4-206ENST00000428680 ADAM7Q9H2U9 754 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 ZDHHC7Q9NXF8 308 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 H2AFY2Q9P0M6 372 aaPredicted RBP7.32□□□□□ -1.24
CNOT4-206ENST00000428680 CTNNAL1Q9UBT7 734 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 RABGEF1Q9UJ41 708 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 SORCS3Q9UPU3 1222 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 CHMP2BQ9UQN3 213 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 FSCN2O14926 492 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 ANGPT2O15123 496 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 DGKIO75912 1065 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 TM7SF2O76062 418 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 SUPT7LO94864 414 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 CD2BP2O95400 341 aaKnown RBP7.32□□□□□ -1.24
CNOT4-206ENST00000428680 KLF8O95600 359 aaPredicted RBP7.32□□□□□ -1.24
CNOT4-206ENST00000428680 FAM107AO95990 144 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 PABPC1P11940 636 aaKnown RBP7.32□□□□□ -1.24
CNOT4-206ENST00000428680 CES1P23141 567 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 VARSP26640 1264 aaKnown RBP7.32□□□□□ -1.24
CNOT4-206ENST00000428680 HOXA9P31269 272 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 ABL2P42684 1182 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 FNTAP49354 379 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 SPARCL1Q14515 664 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 BRMS1LQ5PSV4 323 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 TTC39BQ5VTQ0 682 aaPredicted RBP7.32□□□□□ -1.24
CNOT4-206ENST00000428680 CYP20A1Q6UW02 462 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 ENPP7Q6UWV6 458 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 CCNJLQ8IV13 435 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 MMAAQ8IVH4 418 aaKnown RBP7.32□□□□□ -1.24
CNOT4-206ENST00000428680 TAS2R13Q9NYV9 303 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 KIF17Q9P2E2 1029 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 SCAMP1O15126 338 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 CTIFO43310 598 aaKnown RBP7.32□□□□□ -1.24
CNOT4-206ENST00000428680 MBTPS2O43462 519 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 CCNE2O96020 404 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 RHOP08100 348 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 TMEM253P0C7T8 217 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 GLULP15104 373 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 CLCN1P35523 988 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 EPHB4P54760 987 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 FAM189BP81408 668 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 C1QBPQ07021 282 aaKnown RBP7.32□□□□□ -1.24
CNOT4-206ENST00000428680 SLC20A2Q08357 652 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 CDH17Q12864 832 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 CRY1Q16526 586 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 MLIPQ5VWP3 458 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 LMX1AQ8TE12 382 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 HEXDCQ8WVB3 486 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 LCN9Q8WX39 176 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 SMARCD2Q92925 531 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 VAT1Q99536 393 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 FAM118BQ9BPY3 351 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 NIFKQ9BYG3 293 aaKnown RBP7.32□□□□□ -1.24
CNOT4-206ENST00000428680 MCCC2Q9HCC0 563 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 ERVK-5Q9HDB9 667 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 ABCB8Q9NUT2 735 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 ARL15Q9NXU5 204 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 INSL5Q9Y5Q6 135 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 ALG6Q9Y672 507 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 TAF6LQ9Y6J9 622 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 GRIN2DO15399 1336 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 IGKV6D-21A0A0A0MT36 114 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 A0A0A6YYK5 440 aaPredicted RBP7.31□□□□□ -1.24
CNOT4-206ENST00000428680 SSU72P8A0A1W2PR75 194 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 RAD51BO15315 384 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 ZNF623O75123 536 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 FDPSP14324 419 aaKnown RBP7.31□□□□□ -1.24
CNOT4-206ENST00000428680 CTPS1P17812 591 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 KRT4P19013 534 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 CHI3L1P36222 383 aaPredicted RBP7.31□□□□□ -1.24
CNOT4-206ENST00000428680 LILRA4P59901 499 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 COPZ1P61923 177 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 ADCY2Q08462 1091 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 WHAMMQ8TF30 809 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 PPP1R14AQ96A00 147 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 PHF21AQ96BD5 680 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 PKNOX2Q96KN3 472 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 PPARGC1AQ9UBK2 798 aaKnown RBP7.31□□□□□ -1.24
CNOT4-206ENST00000428680 EIF3LQ9Y262 564 aaKnown RBP7.31□□□□□ -1.24
CNOT4-206ENST00000428680 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.31□□□□□ -1.24
CNOT4-206ENST00000428680 SDR42E2A6NKP2 422 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 PROB1E7EW31 1015 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 SPTBN2O15020 2390 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 SPAG6O75602 509 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 SERPINI2O75830 405 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 PNMA6AP0CW24 399 aaPredicted RBP7.31□□□□□ -1.24
CNOT4-206ENST00000428680 KCNJ5P48544 419 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 C2orf54Q08AI8 447 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 NAB2Q15742 525 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 UGCGQ16739 394 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 ANKRD54Q6NXT1 300 aa7.31□□□□□ -1.24
CNOT4-206ENST00000428680 ZCCHC8Q6NZY4 707 aaKnown RBP7.31□□□□□ -1.24
CNOT4-206ENST00000428680 RFWD3Q6PCD5 774 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms