RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 ERN2Q76MJ5 926 aaKnown RBP16.96■□□□□ 0.31
VRK2-204ENST00000428021 TBC1D3Q8IZP1 549 aaPredicted RBP16.96■□□□□ 0.31
VRK2-204ENST00000428021 LZTR1Q8N653 840 aa16.96■□□□□ 0.31
VRK2-204ENST00000428021 RFFLQ8WZ73 363 aa16.96■□□□□ 0.31
VRK2-204ENST00000428021 PANX2Q96RD6 677 aa16.96■□□□□ 0.31
VRK2-204ENST00000428021 ZDHHC6Q9H6R6 413 aa16.96■□□□□ 0.31
VRK2-204ENST00000428021 UBA2Q9UBT2 640 aaPredicted RBP16.96■□□□□ 0.31
VRK2-204ENST00000428021 LCMT1Q9UIC8 334 aa16.96■□□□□ 0.31
VRK2-204ENST00000428021 CNOT1A5YKK6 2376 aaKnown RBP16.95■□□□□ 0.3
VRK2-204ENST00000428021 TMEM110-MUSTN1A8MSY1 372 aa16.95■□□□□ 0.3
VRK2-204ENST00000428021 DFFAO00273 331 aa16.95■□□□□ 0.3
VRK2-204ENST00000428021 POP4O95707 220 aaKnown RBP16.95■□□□□ 0.3
VRK2-204ENST00000428021 SYPP08247 313 aa16.95■□□□□ 0.3
VRK2-204ENST00000428021 ITGB7P26010 798 aa16.95■□□□□ 0.3
VRK2-204ENST00000428021 MAGEA1P43355 309 aa16.95■□□□□ 0.3
VRK2-204ENST00000428021 CSNK1EP49674 416 aaKnown RBP16.95■□□□□ 0.3
VRK2-204ENST00000428021 DPYSL3Q14195 570 aa16.95■□□□□ 0.3
VRK2-204ENST00000428021 RHOT2Q8IXI1 618 aa16.95■□□□□ 0.3
VRK2-204ENST00000428021 CCDC170Q8IYT3 715 aa16.95■□□□□ 0.3
VRK2-204ENST00000428021 RYBPQ8N488 228 aaPredicted RBP16.95■□□□□ 0.3
VRK2-204ENST00000428021 OR2I1PQ8NGU4 316 aa16.95■□□□□ 0.3
VRK2-204ENST00000428021 LRIG1Q96JA1 1093 aa16.95■□□□□ 0.3
VRK2-204ENST00000428021 RCOR3Q9P2K3 495 aaPredicted RBP16.95■□□□□ 0.3
VRK2-204ENST00000428021 KRIT1O00522 736 aa16.94■□□□□ 0.3
VRK2-204ENST00000428021 WNT9AO14904 365 aa16.94■□□□□ 0.3
VRK2-204ENST00000428021 GJC1P36383 396 aa16.94■□□□□ 0.3
VRK2-204ENST00000428021 ARHGAP25P42331 645 aa16.94■□□□□ 0.3
VRK2-204ENST00000428021 AFF3P51826 1226 aaKnown RBP16.94■□□□□ 0.3
VRK2-204ENST00000428021 RHOAP61586 193 aa16.94■□□□□ 0.3
VRK2-204ENST00000428021 KRT81Q14533 505 aa16.94■□□□□ 0.3
VRK2-204ENST00000428021 TMCO3Q6UWJ1 677 aa16.94■□□□□ 0.3
VRK2-204ENST00000428021 LAYNQ6UX15 382 aa16.94■□□□□ 0.3
VRK2-204ENST00000428021 PARS2Q7L3T8 475 aaKnown RBP16.94■□□□□ 0.3
VRK2-204ENST00000428021 DGLUCYQ7Z3D6 616 aa16.94■□□□□ 0.3
VRK2-204ENST00000428021 TRIM69Q86WT6 500 aa16.94■□□□□ 0.3
VRK2-204ENST00000428021 MINDY1Q8N5J2 469 aa16.94■□□□□ 0.3
VRK2-204ENST00000428021 PPP1R16AQ96I34 528 aa16.94■□□□□ 0.3
VRK2-204ENST00000428021 GDAP1L1Q96MZ0 367 aa16.94■□□□□ 0.3
VRK2-204ENST00000428021 SLC6A18Q96N87 628 aa16.94■□□□□ 0.3
VRK2-204ENST00000428021 GTPBP2Q9BX10 602 aaKnown RBP16.94■□□□□ 0.3
VRK2-204ENST00000428021 PREBQ9HCU5 417 aa16.94■□□□□ 0.3
VRK2-204ENST00000428021 DYRK4Q9NR20 520 aa16.94■□□□□ 0.3
VRK2-204ENST00000428021 KLHL11Q9NVR0 708 aa16.94■□□□□ 0.3
VRK2-204ENST00000428021 IPO11Q9UI26 975 aaKnown RBP16.94■□□□□ 0.3
VRK2-204ENST00000428021 SPTBN2O15020 2390 aa16.93■□□□□ 0.3
VRK2-204ENST00000428021 A0A1B0GVT2 93 aa16.93■□□□□ 0.3
VRK2-204ENST00000428021 SOWAHDA6NJG2 315 aa16.93■□□□□ 0.3
VRK2-204ENST00000428021 INSIG1O15503 277 aa16.93■□□□□ 0.3
VRK2-204ENST00000428021 GJB3O75712 270 aa16.93■□□□□ 0.3
VRK2-204ENST00000428021 IGSF6O95976 241 aa16.93■□□□□ 0.3
VRK2-204ENST00000428021 PEX11BO96011 259 aa16.93■□□□□ 0.3
VRK2-204ENST00000428021 KRT7P08729 469 aa16.93■□□□□ 0.3
VRK2-204ENST00000428021 GRIA4P48058 902 aa16.93■□□□□ 0.3
VRK2-204ENST00000428021 RACK1P63244 317 aaKnown RBP16.93■□□□□ 0.3
VRK2-204ENST00000428021 IL10RBQ08334 325 aa16.93■□□□□ 0.3
VRK2-204ENST00000428021 CCDC15Q0P6D6 951 aa16.93■□□□□ 0.3
VRK2-204ENST00000428021 ZNF805Q5CZA5 627 aa16.93■□□□□ 0.3
VRK2-204ENST00000428021 KCTD6Q8NC69 237 aa16.93■□□□□ 0.3
VRK2-204ENST00000428021 PCDH19Q8TAB3 1148 aa16.93■□□□□ 0.3
VRK2-204ENST00000428021 RAPGEF5Q92565 580 aa16.93■□□□□ 0.3
VRK2-204ENST00000428021 EXOC2Q96KP1 924 aa16.93■□□□□ 0.3
VRK2-204ENST00000428021 ZDHHC5Q9C0B5 715 aa16.93■□□□□ 0.3
VRK2-204ENST00000428021 DNAAF2Q9NVR5 837 aaKnown RBP16.93■□□□□ 0.3
VRK2-204ENST00000428021 TPX2Q9ULW0 747 aaKnown RBP16.93■□□□□ 0.3
VRK2-204ENST00000428021 TFR2Q9UP52 801 aa16.93■□□□□ 0.3
VRK2-204ENST00000428021 PCDHA13Q9Y5I0 950 aa16.93■□□□□ 0.3
VRK2-204ENST00000428021 A0A1W2PR77 199 aa16.92■□□□□ 0.3
VRK2-204ENST00000428021 C16orf96A6NNT2 1141 aa16.92■□□□□ 0.3
VRK2-204ENST00000428021 RNGTTO60942 597 aaKnown RBP16.92■□□□□ 0.3
VRK2-204ENST00000428021 PALMO75781 387 aa16.92■□□□□ 0.3
VRK2-204ENST00000428021 WNT1P04628 370 aa16.92■□□□□ 0.3
VRK2-204ENST00000428021 UGT2B4P06133 528 aa16.92■□□□□ 0.3
VRK2-204ENST00000428021 ADRB3P13945 408 aa16.92■□□□□ 0.3
VRK2-204ENST00000428021 CDC25BP30305 580 aa16.92■□□□□ 0.3
VRK2-204ENST00000428021 MAT2AP31153 395 aaKnown RBP16.92■□□□□ 0.3
VRK2-204ENST00000428021 RGRP47804 291 aa16.92■□□□□ 0.3
VRK2-204ENST00000428021 NEK3P51956 506 aa16.92■□□□□ 0.3
VRK2-204ENST00000428021 ATXN3P54252 364 aaPredicted RBP16.92■□□□□ 0.3
VRK2-204ENST00000428021 HADHBP55084 474 aaKnown RBP16.92■□□□□ 0.3
VRK2-204ENST00000428021 PDK2Q15119 407 aa16.92■□□□□ 0.3
VRK2-204ENST00000428021 KIF19Q2TAC6 998 aa16.92■□□□□ 0.3
VRK2-204ENST00000428021 ZNF284Q2VY69 593 aa16.92■□□□□ 0.3
VRK2-204ENST00000428021 UAP1L1Q3KQV9 507 aa16.92■□□□□ 0.3
VRK2-204ENST00000428021 ANKRD20A8PQ5CZ79 823 aa16.92■□□□□ 0.3
VRK2-204ENST00000428021 NEK5Q6P3R8 708 aa16.92■□□□□ 0.3
VRK2-204ENST00000428021 GDPD4Q6W3E5 623 aa16.92■□□□□ 0.3
VRK2-204ENST00000428021 ERMP1Q7Z2K6 904 aa16.92■□□□□ 0.3
VRK2-204ENST00000428021 PRPF39Q86UA1 669 aaKnown RBP16.92■□□□□ 0.3
VRK2-204ENST00000428021 TMTC1Q8IUR5 882 aa16.92■□□□□ 0.3
VRK2-204ENST00000428021 TSEN2Q8NCE0 465 aaKnown RBP16.92■□□□□ 0.3
VRK2-204ENST00000428021 FAF2Q96CS3 445 aa16.92■□□□□ 0.3
VRK2-204ENST00000428021 KLHL32Q96NJ5 620 aa16.92■□□□□ 0.3
VRK2-204ENST00000428021 ZNF670Q9BS34 389 aa16.92■□□□□ 0.3
VRK2-204ENST00000428021 CALN1Q9BXU9 219 aa16.92■□□□□ 0.3
VRK2-204ENST00000428021 OSBPL1AQ9BXW6 950 aa16.92■□□□□ 0.3
VRK2-204ENST00000428021 CPEB1Q9BZB8 566 aaKnown RBP16.92■□□□□ 0.3
VRK2-204ENST00000428021 SP110Q9HB58 689 aa16.92■□□□□ 0.3
VRK2-204ENST00000428021 ZFR2Q9UPR6 939 aaKnown RBP16.92■□□□□ 0.3
VRK2-204ENST00000428021 ANKRD6Q9Y2G4 727 aa16.92■□□□□ 0.3
VRK2-204ENST00000428021 FADS3Q9Y5Q0 445 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms