RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 PROSER2Q86WR7 435 aaPredicted RBP5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 DHFR2Q86XF0 187 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 PLD3Q8IV08 490 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 ZC3H7AQ8IWR0 971 aaKnown RBP5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 FAM71AQ8IYT1 594 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 SCML4Q8N228 414 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 LCORLQ8N3X6 602 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 STX19Q8N4C7 294 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 NATD1Q8N6N6 113 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 POC5Q8NA72 575 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 OR2T34Q8NGX1 318 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 OR2T3Q8NH03 318 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 ENKURQ8TC29 256 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 SH3RF3Q8TEJ3 882 aaPredicted RBP5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 TGFBRAP1Q8WUH2 860 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 KLHL6Q8WZ60 621 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 FCGR1BQ92637 280 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 HDAC2Q92769 488 aaKnown RBP5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 GLMNQ92990 594 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 ZUFSPQ96AP4 578 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 TMIGD2Q96BF3 282 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 ROPN1LQ96C74 230 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 HDAC11Q96DB2 347 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 GIMAP5Q96F15 307 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 CENPNQ96H22 339 aaPredicted RBP5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 FAM84AQ96KN4 292 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 GLT1D1Q96MS3 346 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 SAMD11Q96NU1 681 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 TM9SF2Q99805 663 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 SH2D3AQ9BRG2 576 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 TMEM246Q9BRR3 403 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 HERC2P3Q9BVR0 1158 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 APOL6Q9BWW8 343 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 C6orf62Q9GZU0 229 aaPredicted RBP5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 NYXQ9GZU5 481 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 ILKAPQ9H0C8 392 aaPredicted RBP5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 PPA2Q9H2U2 334 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 COQ10BQ9H8M1 238 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 ZNF556Q9HAH1 456 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 FANCEQ9HB96 536 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 MRM3Q9HC36 420 aaKnown RBP5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 CYP4F12Q9HCS2 524 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 UBE2TQ9NPD8 197 aaPredicted RBP5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 PTTG3PQ9NZH4 202 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 VPS51Q9UID3 782 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 BAG5Q9UL15 447 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 MAFFQ9ULX9 164 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 AGTPBP1Q9UPW5 1226 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 CDYLQ9Y232 598 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 RAD54BQ9Y620 910 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 PSME4Q14997 1843 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 IRS2Q9Y4H2 1338 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 LINC00854A0A1B0GVQ3 168 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 TCRBV7S2A1N4TA0A589 114 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 TCRBV3S1A0A5B6 114 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 TYW5A2RUC4 315 aaKnown RBP5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 F8W810 466 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 INO80B-WBP1J3KQ70 363 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 SLC9A3R1O14745 358 aaPredicted RBP5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 TNPO2O14787 897 aaKnown RBP5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 AIM2O14862 343 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 TFECO14948 347 aaPredicted RBP5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 AURKAO14965 403 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 ZBTB5O15062 677 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 HDAC3O15379 428 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 DCXO43602 365 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 EXTL3O43909 919 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 ZNF254O75437 659 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 SRP72O76094 671 aaKnown RBP5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 PRKD3O94806 890 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 GABARAPO95166 117 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 VAPBO95292 243 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 ECDO95905 644 aaPredicted RBP5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 PAHP00439 452 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 KRT1P04264 644 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 MAPTP10636 758 aaKnown RBP5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 KITP10721 976 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 FGFR1P11362 822 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 IL7P13232 177 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 PTPN1P18031 435 aaKnown RBP5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 TGM2P21980 687 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 BDNFP23560 247 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 PRKCHP24723 683 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 GMPRP36959 345 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 BTDP43251 543 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 RECQLP46063 649 aaPredicted RBP5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 NPTX2P47972 431 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 ALDH7A1P49419 539 aaKnown RBP5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 SERPINH1P50454 418 aaKnown RBP5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 MLLT6P55198 1093 aaPredicted RBP5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 GPX6P59796 221 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 IFITM2Q01629 132 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 PRKCDQ05655 676 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 FOXM1Q08050 763 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 PRKAA1Q13131 559 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 PIGHQ14442 188 aaPredicted RBP5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 STARD3Q14849 445 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 NEDD8Q15843 81 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 NRF1Q16656 503 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms