RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 OVGP1Q12889 678 aa18.73■□□□□ 0.59
GPC1-205ENST00000427506 MAPK8IP2Q13387 824 aaPredicted RBP18.73■□□□□ 0.59
GPC1-205ENST00000427506 MYLK3Q32MK0 819 aa18.73■□□□□ 0.59
GPC1-205ENST00000427506 ATXN7L2Q5T6C5 722 aaPredicted RBP18.73■□□□□ 0.59
GPC1-205ENST00000427506 UNQ6494/PRO21346Q6UXR6 183 aa18.73■□□□□ 0.59
GPC1-205ENST00000427506 PARS2Q7L3T8 475 aaKnown RBP18.73■□□□□ 0.59
GPC1-205ENST00000427506 UMODL1-AS1Q8N2C9 162 aa18.73■□□□□ 0.59
GPC1-205ENST00000427506 OXR1Q8N573 874 aa18.73■□□□□ 0.59
GPC1-205ENST00000427506 BAHD1Q8TBE0 780 aaPredicted RBP18.73■□□□□ 0.59
GPC1-205ENST00000427506 CASKIN2Q8WXE0 1202 aa18.73■□□□□ 0.59
GPC1-205ENST00000427506 SYN2Q92777 582 aaPredicted RBP18.73■□□□□ 0.59
GPC1-205ENST00000427506 IQCDQ96DY2 449 aa18.73■□□□□ 0.59
GPC1-205ENST00000427506 KLHDC7BQ96G42 594 aa18.73■□□□□ 0.59
GPC1-205ENST00000427506 FEM1CQ96JP0 617 aa18.73■□□□□ 0.59
GPC1-205ENST00000427506 GDAP1L1Q96MZ0 367 aa18.73■□□□□ 0.59
GPC1-205ENST00000427506 SNRNP25Q9BV90 132 aaKnown RBP18.73■□□□□ 0.59
GPC1-205ENST00000427506 KLC2Q9H0B6 622 aa18.73■□□□□ 0.59
GPC1-205ENST00000427506 ISCUQ9H1K1 167 aa18.73■□□□□ 0.59
GPC1-205ENST00000427506 TMEM131Q92545 1883 aa18.73■□□□□ 0.59
GPC1-205ENST00000427506 C1QTNF9BB2RNN3 333 aa18.72■□□□□ 0.59
GPC1-205ENST00000427506 EIF3CLB5ME19 914 aaKnown RBP18.72■□□□□ 0.59
GPC1-205ENST00000427506 NEMP1O14524 444 aa18.72■□□□□ 0.59
GPC1-205ENST00000427506 IGSF6O95976 241 aa18.72■□□□□ 0.59
GPC1-205ENST00000427506 SERPING1P05155 500 aa18.72■□□□□ 0.59
GPC1-205ENST00000427506 UGT2B4P06133 528 aa18.72■□□□□ 0.59
GPC1-205ENST00000427506 C1QTNF9P0C862 333 aa18.72■□□□□ 0.59
GPC1-205ENST00000427506 HNRNPA2B1P22626 353 aaKnown RBP18.72■□□□□ 0.59
GPC1-205ENST00000427506 MIPP30301 263 aa18.72■□□□□ 0.59
GPC1-205ENST00000427506 RHOAP61586 193 aa18.72■□□□□ 0.59
GPC1-205ENST00000427506 ZBED6P86452 979 aa18.72■□□□□ 0.59
GPC1-205ENST00000427506 SERINC3Q13530 473 aa18.72■□□□□ 0.59
GPC1-205ENST00000427506 NFKBIBQ15653 356 aa18.72■□□□□ 0.59
GPC1-205ENST00000427506 CA9Q16790 459 aa18.72■□□□□ 0.59
GPC1-205ENST00000427506 ZNF284Q2VY69 593 aa18.72■□□□□ 0.59
GPC1-205ENST00000427506 ZNF805Q5CZA5 627 aa18.72■□□□□ 0.59
GPC1-205ENST00000427506 SEL1L3Q68CR1 1132 aa18.72■□□□□ 0.59
GPC1-205ENST00000427506 RAB44Q7Z6P3 723 aaPredicted RBP18.72■□□□□ 0.59
GPC1-205ENST00000427506 SLCO6A1Q86UG4 719 aa18.72■□□□□ 0.59
GPC1-205ENST00000427506 SPATS2Q86XZ4 545 aaKnown RBP18.72■□□□□ 0.59
GPC1-205ENST00000427506 ARFGAP1Q8N6T3 406 aa18.72■□□□□ 0.59
GPC1-205ENST00000427506 FNIP1Q8TF40 1166 aa18.72■□□□□ 0.59
GPC1-205ENST00000427506 ADAMTS14Q8WXS8 1223 aa18.72■□□□□ 0.59
GPC1-205ENST00000427506 PEBP4Q96S96 227 aa18.72■□□□□ 0.59
GPC1-205ENST00000427506 EIF3CQ99613 913 aaKnown RBP18.72■□□□□ 0.59
GPC1-205ENST00000427506 NCAPGQ9BPX3 1015 aa18.72■□□□□ 0.59
GPC1-205ENST00000427506 OSBPL1AQ9BXW6 950 aa18.72■□□□□ 0.59
GPC1-205ENST00000427506 ERVMER34-1Q9H9K5 563 aa18.72■□□□□ 0.59
GPC1-205ENST00000427506 FZD3Q9NPG1 666 aa18.72■□□□□ 0.59
GPC1-205ENST00000427506 FTSJ1Q9UET6 329 aa18.72■□□□□ 0.59
GPC1-205ENST00000427506 CAPN11Q9UMQ6 739 aa18.72■□□□□ 0.59
GPC1-205ENST00000427506 ZFR2Q9UPR6 939 aaKnown RBP18.72■□□□□ 0.59
GPC1-205ENST00000427506 LUC7L2Q9Y383 392 aaKnown RBP18.72■□□□□ 0.59
GPC1-205ENST00000427506 FADS3Q9Y5Q0 445 aa18.72■□□□□ 0.59
GPC1-205ENST00000427506 PCNX2A6NKB5 2137 aa18.71■□□□□ 0.59
GPC1-205ENST00000427506 C16orf96A6NNT2 1141 aa18.71■□□□□ 0.59
GPC1-205ENST00000427506 TNFSF14O43557 240 aa18.71■□□□□ 0.59
GPC1-205ENST00000427506 TPM3P06753 285 aa18.71■□□□□ 0.59
GPC1-205ENST00000427506 ATXN1LP0C7T5 689 aaKnown RBP18.71■□□□□ 0.59
GPC1-205ENST00000427506 THEGLP0DJG4 465 aa18.71■□□□□ 0.59
GPC1-205ENST00000427506 RPS21P63220 83 aaKnown RBP18.71■□□□□ 0.59
GPC1-205ENST00000427506 SHBQ15464 509 aa18.71■□□□□ 0.59
GPC1-205ENST00000427506 INO80DQ53TQ3 878 aaPredicted RBP18.71■□□□□ 0.59
GPC1-205ENST00000427506 CCDC157Q569K6 752 aa18.71■□□□□ 0.59
GPC1-205ENST00000427506 PPP6R3Q5H9R7 873 aaPredicted RBP18.71■□□□□ 0.59
GPC1-205ENST00000427506 HGSNATQ68CP4 663 aa18.71■□□□□ 0.59
GPC1-205ENST00000427506 KIAA1161Q6NSJ0 714 aa18.71■□□□□ 0.59
GPC1-205ENST00000427506 GDPD4Q6W3E5 623 aa18.71■□□□□ 0.59
GPC1-205ENST00000427506 NETO2Q8NC67 525 aa18.71■□□□□ 0.59
GPC1-205ENST00000427506 RAB7BQ96AH8 199 aa18.71■□□□□ 0.59
GPC1-205ENST00000427506 CELF6Q96J87 481 aaKnown RBP18.71■□□□□ 0.59
GPC1-205ENST00000427506 KLHL32Q96NJ5 620 aa18.71■□□□□ 0.59
GPC1-205ENST00000427506 KCTD15Q96SI1 283 aaPredicted RBP18.71■□□□□ 0.59
GPC1-205ENST00000427506 UBA2Q9UBT2 640 aaPredicted RBP18.71■□□□□ 0.59
GPC1-205ENST00000427506 MSRB2Q9Y3D2 182 aa18.71■□□□□ 0.59
GPC1-205ENST00000427506 ARHGAP42A6NI28 874 aa18.7■□□□□ 0.58
GPC1-205ENST00000427506 AP1G1O43747 822 aa18.7■□□□□ 0.58
GPC1-205ENST00000427506 LRCH4O75427 683 aa18.7■□□□□ 0.58
GPC1-205ENST00000427506 PROS1P07225 676 aa18.7■□□□□ 0.58
GPC1-205ENST00000427506 EPHA8P29322 1005 aaPredicted RBP18.7■□□□□ 0.58
GPC1-205ENST00000427506 NDST2P52849 883 aa18.7■□□□□ 0.58
GPC1-205ENST00000427506 BNIP3Q12983 259 aa18.7■□□□□ 0.58
GPC1-205ENST00000427506 SGCGQ13326 291 aa18.7■□□□□ 0.58
GPC1-205ENST00000427506 RFX8Q6ZV50 586 aa18.7■□□□□ 0.58
GPC1-205ENST00000427506 TMEM145Q8NBT3 493 aa18.7■□□□□ 0.58
GPC1-205ENST00000427506 SAP25Q8TEE9 199 aa18.7■□□□□ 0.58
GPC1-205ENST00000427506 CALN1Q9BXU9 219 aa18.7■□□□□ 0.58
GPC1-205ENST00000427506 SLC17A9Q9BYT1 436 aa18.7■□□□□ 0.58
GPC1-205ENST00000427506 TSPAN6O43657 245 aa18.69■□□□□ 0.58
GPC1-205ENST00000427506 PAK4O96013 591 aaPredicted RBP18.69■□□□□ 0.58
GPC1-205ENST00000427506 ERCC2P18074 760 aa18.69■□□□□ 0.58
GPC1-205ENST00000427506 ABL2P42684 1182 aa18.69■□□□□ 0.58
GPC1-205ENST00000427506 RXRGP48443 463 aa18.69■□□□□ 0.58
GPC1-205ENST00000427506 CLDN2P57739 230 aa18.69■□□□□ 0.58
GPC1-205ENST00000427506 ACAP1Q15027 740 aa18.69■□□□□ 0.58
GPC1-205ENST00000427506 TMEM259Q4ZIN3 620 aa18.69■□□□□ 0.58
GPC1-205ENST00000427506 TTC7BQ86TV6 843 aa18.69■□□□□ 0.58
GPC1-205ENST00000427506 PSTKQ8IV42 348 aaKnown RBP18.69■□□□□ 0.58
GPC1-205ENST00000427506 EID2Q8N6I1 236 aa18.69■□□□□ 0.58
GPC1-205ENST00000427506 ARHGEF26Q96DR7 871 aa18.69■□□□□ 0.58
GPC1-205ENST00000427506 EXOC2Q96KP1 924 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms