RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 RAPGEF5Q92565 580 aa18.31■□□□□ 0.52
HERC3-205ENST00000426683 LRIG1Q96JA1 1093 aa18.31■□□□□ 0.52
HERC3-205ENST00000426683 EXOC2Q96KP1 924 aa18.31■□□□□ 0.52
HERC3-205ENST00000426683 EDEM2Q9BV94 578 aa18.31■□□□□ 0.52
HERC3-205ENST00000426683 FSCN3Q9NQT6 498 aa18.31■□□□□ 0.52
HERC3-205ENST00000426683 REXO2Q9Y3B8 237 aaKnown RBP18.31■□□□□ 0.52
HERC3-205ENST00000426683 A0A1B0GTW7 788 aa18.3■□□□□ 0.52
HERC3-205ENST00000426683 LRRD1A4D1F6 860 aa18.3■□□□□ 0.52
HERC3-205ENST00000426683 RCCD1A6NED2 376 aa18.3■□□□□ 0.52
HERC3-205ENST00000426683 SPOPO43791 374 aa18.3■□□□□ 0.52
HERC3-205ENST00000426683 BUB1BO60566 1050 aaPredicted RBP18.3■□□□□ 0.52
HERC3-205ENST00000426683 PALMO75781 387 aa18.3■□□□□ 0.52
HERC3-205ENST00000426683 SERPINF2P08697 491 aa18.3■□□□□ 0.52
HERC3-205ENST00000426683 TNNT1P13805 278 aa18.3■□□□□ 0.52
HERC3-205ENST00000426683 RAD51Q06609 339 aa18.3■□□□□ 0.52
HERC3-205ENST00000426683 RSPO4Q2I0M5 234 aaPredicted RBP18.3■□□□□ 0.52
HERC3-205ENST00000426683 LRRC38Q5VT99 294 aa18.3■□□□□ 0.52
HERC3-205ENST00000426683 NCBP2-AS2Q69YL0 99 aa18.3■□□□□ 0.52
HERC3-205ENST00000426683 RHOT1Q8IXI2 618 aa18.3■□□□□ 0.52
HERC3-205ENST00000426683 NETO1Q8TDF5 533 aa18.3■□□□□ 0.52
HERC3-205ENST00000426683 FAF2Q96CS3 445 aa18.3■□□□□ 0.52
HERC3-205ENST00000426683 RMDN1Q96DB5 314 aa18.3■□□□□ 0.52
HERC3-205ENST00000426683 HDAC8Q9BY41 377 aa18.3■□□□□ 0.52
HERC3-205ENST00000426683 KDM4CQ9H3R0 1056 aa18.3■□□□□ 0.52
HERC3-205ENST00000426683 CAPN10Q9HC96 672 aa18.3■□□□□ 0.52
HERC3-205ENST00000426683 FRYLO94915 3013 aa18.3■□□□□ 0.52
HERC3-205ENST00000426683 NUP205Q92621 2012 aa18.29■□□□□ 0.52
HERC3-205ENST00000426683 C10orf142B7Z368 130 aa18.29■□□□□ 0.52
HERC3-205ENST00000426683 BCAT2O15382 392 aaPredicted RBP18.29■□□□□ 0.52
HERC3-205ENST00000426683 MFSD11O43934 449 aa18.29■□□□□ 0.52
HERC3-205ENST00000426683 KRT1P04264 644 aa18.29■□□□□ 0.52
HERC3-205ENST00000426683 UGT2B4P06133 528 aa18.29■□□□□ 0.52
HERC3-205ENST00000426683 ITGB7P26010 798 aa18.29■□□□□ 0.52
HERC3-205ENST00000426683 CD27P26842 260 aa18.29■□□□□ 0.52
HERC3-205ENST00000426683 CCR5P51681 352 aa18.29■□□□□ 0.52
HERC3-205ENST00000426683 NEK3P51956 506 aa18.29■□□□□ 0.52
HERC3-205ENST00000426683 TAS2R38P59533 333 aa18.29■□□□□ 0.52
HERC3-205ENST00000426683 PPP2CBP62714 309 aa18.29■□□□□ 0.52
HERC3-205ENST00000426683 PPP2CAP67775 309 aa18.29■□□□□ 0.52
HERC3-205ENST00000426683 RFTN1Q14699 578 aaPredicted RBP18.29■□□□□ 0.52
HERC3-205ENST00000426683 PAFAH1B3Q15102 231 aaKnown RBP18.29■□□□□ 0.52
HERC3-205ENST00000426683 ATPAF2Q8N5M1 289 aa18.29■□□□□ 0.52
HERC3-205ENST00000426683 C1orf216Q8TAB5 229 aa18.29■□□□□ 0.52
HERC3-205ENST00000426683 VOPP1Q96AW1 172 aa18.29■□□□□ 0.52
HERC3-205ENST00000426683 CINPQ9BW66 212 aaPredicted RBP18.29■□□□□ 0.52
HERC3-205ENST00000426683 OSBPL1AQ9BXW6 950 aa18.29■□□□□ 0.52
HERC3-205ENST00000426683 GOLPH3Q9H4A6 298 aa18.29■□□□□ 0.52
HERC3-205ENST00000426683 SALL4Q9UJQ4 1053 aa18.29■□□□□ 0.52
HERC3-205ENST00000426683 CDV3Q9UKY7 258 aaKnown RBP18.29■□□□□ 0.52
HERC3-205ENST00000426683 ALG6Q9Y672 507 aa18.29■□□□□ 0.52
HERC3-205ENST00000426683 SLCO1B1Q9Y6L6 691 aa18.29■□□□□ 0.52
HERC3-205ENST00000426683 CEP192Q8TEP8 1941 aa18.29■□□□□ 0.52
HERC3-205ENST00000426683 NUMA1Q14980 2115 aa18.28■□□□□ 0.52
HERC3-205ENST00000426683 A0A1W2PPC4 97 aa18.28■□□□□ 0.52
HERC3-205ENST00000426683 INSIG1O15503 277 aa18.28■□□□□ 0.52
HERC3-205ENST00000426683 ENGP17813 658 aa18.28■□□□□ 0.52
HERC3-205ENST00000426683 VAV2P52735 878 aa18.28■□□□□ 0.52
HERC3-205ENST00000426683 GSDMDP57764 484 aa18.28■□□□□ 0.52
HERC3-205ENST00000426683 ODF2Q5BJF6 829 aa18.28■□□□□ 0.52
HERC3-205ENST00000426683 ZNF805Q5CZA5 627 aa18.28■□□□□ 0.52
HERC3-205ENST00000426683 TMCO4Q5TGY1 634 aa18.28■□□□□ 0.52
HERC3-205ENST00000426683 STPG1Q5TH74 334 aa18.28■□□□□ 0.52
HERC3-205ENST00000426683 FBXL19Q6PCT2 694 aa18.28■□□□□ 0.52
HERC3-205ENST00000426683 GDPD4Q6W3E5 623 aa18.28■□□□□ 0.52
HERC3-205ENST00000426683 PARS2Q7L3T8 475 aaKnown RBP18.28■□□□□ 0.52
HERC3-205ENST00000426683 PQLC3Q8N755 202 aa18.28■□□□□ 0.52
HERC3-205ENST00000426683 TSEN2Q8NCE0 465 aaKnown RBP18.28■□□□□ 0.52
HERC3-205ENST00000426683 KLHL32Q96NJ5 620 aa18.28■□□□□ 0.52
HERC3-205ENST00000426683 ZNF599Q96NL3 588 aa18.28■□□□□ 0.52
HERC3-205ENST00000426683 RNF157Q96PX1 679 aa18.28■□□□□ 0.52
HERC3-205ENST00000426683 ORAI3Q9BRQ5 295 aa18.28■□□□□ 0.52
HERC3-205ENST00000426683 EBF2Q9HAK2 575 aa18.28■□□□□ 0.52
HERC3-205ENST00000426683 PREBQ9HCU5 417 aa18.28■□□□□ 0.52
HERC3-205ENST00000426683 DDX56Q9NY93 547 aaKnown RBP18.28■□□□□ 0.52
HERC3-205ENST00000426683 RALGAPA1Q6GYQ0 2036 aa18.28■□□□□ 0.52
HERC3-205ENST00000426683 MAFKO60675 156 aa18.27■□□□□ 0.52
HERC3-205ENST00000426683 ADRB3P13945 408 aa18.27■□□□□ 0.52
HERC3-205ENST00000426683 SDHBP21912 280 aa18.27■□□□□ 0.52
HERC3-205ENST00000426683 MAPK8P45983 427 aa18.27■□□□□ 0.52
HERC3-205ENST00000426683 RGRP47804 291 aa18.27■□□□□ 0.52
HERC3-205ENST00000426683 ID4P47928 161 aa18.27■□□□□ 0.52
HERC3-205ENST00000426683 LIMK1P53667 647 aa18.27■□□□□ 0.52
HERC3-205ENST00000426683 ATXN3P54252 364 aaPredicted RBP18.27■□□□□ 0.52
HERC3-205ENST00000426683 NAP1L1P55209 391 aaKnown RBP18.27■□□□□ 0.52
HERC3-205ENST00000426683 SLC10A7Q0GE19 358 aa18.27■□□□□ 0.52
HERC3-205ENST00000426683 LBRQ14739 615 aaKnown RBP18.27■□□□□ 0.52
HERC3-205ENST00000426683 C11orf63Q6NUN7 778 aa18.27■□□□□ 0.52
HERC3-205ENST00000426683 KIAA1328Q86T90 577 aa18.27■□□□□ 0.52
HERC3-205ENST00000426683 TPCN2Q8NHX9 752 aa18.27■□□□□ 0.52
HERC3-205ENST00000426683 RNF25Q96BH1 459 aaPredicted RBP18.27■□□□□ 0.52
HERC3-205ENST00000426683 DESI2Q9BSY9 194 aa18.27■□□□□ 0.52
HERC3-205ENST00000426683 GTPBP2Q9BX10 602 aaKnown RBP18.27■□□□□ 0.52
HERC3-205ENST00000426683 LACRTQ9GZZ8 138 aa18.27■□□□□ 0.52
HERC3-205ENST00000426683 TM9SF3Q9HD45 589 aa18.27■□□□□ 0.52
HERC3-205ENST00000426683 TMEM9BQ9NQ34 198 aa18.27■□□□□ 0.52
HERC3-205ENST00000426683 SEPT3Q9UH03 358 aa18.27■□□□□ 0.52
HERC3-205ENST00000426683 TPX2Q9ULW0 747 aaKnown RBP18.27■□□□□ 0.52
HERC3-205ENST00000426683 DUSP10Q9Y6W6 482 aa18.27■□□□□ 0.52
HERC3-205ENST00000426683 C3orf70A6NLC5 250 aaPredicted RBP18.26■□□□□ 0.51
HERC3-205ENST00000426683 C16orf96A6NNT2 1141 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms