RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 MPP3Q13368 585 aa16.78■□□□□ 0.28
CMTM3-202ENST00000424011 ALFQ53S48 1182 aa16.78■□□□□ 0.28
CMTM3-202ENST00000424011 HECTD3Q5T447 861 aa16.78■□□□□ 0.28
CMTM3-202ENST00000424011 CERCAMQ5T4B2 595 aa16.78■□□□□ 0.28
CMTM3-202ENST00000424011 MARC1Q5VT66 337 aa16.78■□□□□ 0.28
CMTM3-202ENST00000424011 SLC39A11Q8N1S5 342 aa16.78■□□□□ 0.28
CMTM3-202ENST00000424011 PTCD2Q8WV60 388 aaKnown RBP16.78■□□□□ 0.28
CMTM3-202ENST00000424011 TRAPPC9Q96Q05 1148 aa16.78■□□□□ 0.28
CMTM3-202ENST00000424011 HERC2P3Q9BVR0 1158 aa16.78■□□□□ 0.28
CMTM3-202ENST00000424011 FSD1LQ9BXM9 530 aa16.78■□□□□ 0.28
CMTM3-202ENST00000424011 SP110Q9HB58 689 aa16.78■□□□□ 0.28
CMTM3-202ENST00000424011 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.78■□□□□ 0.28
CMTM3-202ENST00000424011 NSMCE4AQ9NXX6 385 aa16.78■□□□□ 0.28
CMTM3-202ENST00000424011 PSAT1Q9Y617 370 aa16.78■□□□□ 0.28
CMTM3-202ENST00000424011 NUMBLQ9Y6R0 609 aa16.78■□□□□ 0.28
CMTM3-202ENST00000424011 F5H5T6 163 aa16.78■□□□□ 0.28
CMTM3-202ENST00000424011 RAMP2O60895 175 aa16.78■□□□□ 0.28
CMTM3-202ENST00000424011 HLA-DQB2P05538 268 aa16.78■□□□□ 0.28
CMTM3-202ENST00000424011 ERVK-10P10266 1014 aa16.78■□□□□ 0.28
CMTM3-202ENST00000424011 ACADSP16219 412 aa16.78■□□□□ 0.28
CMTM3-202ENST00000424011 EN2P19622 333 aaPredicted RBP16.78■□□□□ 0.28
CMTM3-202ENST00000424011 SKIV2L2P42285 1042 aaKnown RBP16.78■□□□□ 0.28
CMTM3-202ENST00000424011 PPP3CCP48454 512 aa16.78■□□□□ 0.28
CMTM3-202ENST00000424011 SLC11A2P49281 568 aa16.78■□□□□ 0.28
CMTM3-202ENST00000424011 VEPH1Q14D04 833 aa16.78■□□□□ 0.28
CMTM3-202ENST00000424011 TAF12Q16514 161 aa16.78■□□□□ 0.28
CMTM3-202ENST00000424011 PCID2Q5JVF3 399 aa16.78■□□□□ 0.28
CMTM3-202ENST00000424011 CMTR2Q8IYT2 770 aaKnown RBP16.78■□□□□ 0.28
CMTM3-202ENST00000424011 IPMKQ8NFU5 416 aa16.78■□□□□ 0.28
CMTM3-202ENST00000424011 SPATA22Q8NHS9 363 aa16.78■□□□□ 0.28
CMTM3-202ENST00000424011 ZNF398Q8TD17 642 aa16.78■□□□□ 0.28
CMTM3-202ENST00000424011 IGSF8Q969P0 613 aa16.78■□□□□ 0.28
CMTM3-202ENST00000424011 HMCESQ96FZ2 354 aa16.78■□□□□ 0.28
CMTM3-202ENST00000424011 MYRFLQ96LU7 910 aa16.78■□□□□ 0.28
CMTM3-202ENST00000424011 FCRL3Q96P31 734 aaPredicted RBP16.78■□□□□ 0.28
CMTM3-202ENST00000424011 APOL2Q9BQE5 337 aa16.78■□□□□ 0.28
CMTM3-202ENST00000424011 KIFC1Q9BW19 673 aa16.78■□□□□ 0.28
CMTM3-202ENST00000424011 SLC25A51Q9H1U9 297 aa16.78■□□□□ 0.28
CMTM3-202ENST00000424011 RNPEPL1Q9HAU8 725 aa16.78■□□□□ 0.28
CMTM3-202ENST00000424011 ZCWPW2A0A1B0GU75 182 aa16.77■□□□□ 0.28
CMTM3-202ENST00000424011 CNTN5O94779 1100 aa16.77■□□□□ 0.28
CMTM3-202ENST00000424011 CALB2P22676 271 aa16.77■□□□□ 0.28
CMTM3-202ENST00000424011 BTG3Q14201 252 aaPredicted RBP16.77■□□□□ 0.28
CMTM3-202ENST00000424011 POLD3Q15054 466 aaPredicted RBP16.77■□□□□ 0.28
CMTM3-202ENST00000424011 STXBP5Q5T5C0 1151 aa16.77■□□□□ 0.28
CMTM3-202ENST00000424011 POTEHQ6S545 545 aa16.77■□□□□ 0.28
CMTM3-202ENST00000424011 IFT43Q96FT9 208 aa16.77■□□□□ 0.28
CMTM3-202ENST00000424011 TRIM55Q9BYV6 548 aa16.77■□□□□ 0.28
CMTM3-202ENST00000424011 VCXQ9H320 206 aa16.77■□□□□ 0.28
CMTM3-202ENST00000424011 CYP4F11Q9HBI6 524 aa16.77■□□□□ 0.28
CMTM3-202ENST00000424011 SPG21Q9NZD8 308 aa16.77■□□□□ 0.28
CMTM3-202ENST00000424011 TRPM5Q9NZQ8 1165 aa16.77■□□□□ 0.28
CMTM3-202ENST00000424011 NKX1-2Q9UD57 310 aaPredicted RBP16.77■□□□□ 0.28
CMTM3-202ENST00000424011 STK39Q9UEW8 545 aa16.77■□□□□ 0.28
CMTM3-202ENST00000424011 ZNF840PA6NDX5 716 aa16.76■□□□□ 0.27
CMTM3-202ENST00000424011 MT-CYBP00156 380 aaPredicted RBP16.76■□□□□ 0.27
CMTM3-202ENST00000424011 URODP06132 367 aa16.76■□□□□ 0.27
CMTM3-202ENST00000424011 ITGA2BP08514 1039 aa16.76■□□□□ 0.27
CMTM3-202ENST00000424011 TACR2P21452 398 aa16.76■□□□□ 0.27
CMTM3-202ENST00000424011 TARSP26639 723 aaKnown RBP16.76■□□□□ 0.27
CMTM3-202ENST00000424011 OR1E1P30953 314 aa16.76■□□□□ 0.27
CMTM3-202ENST00000424011 SPRP35270 261 aaPredicted RBP16.76■□□□□ 0.27
CMTM3-202ENST00000424011 POLE2P56282 527 aa16.76■□□□□ 0.27
CMTM3-202ENST00000424011 PDE1BQ01064 536 aa16.76■□□□□ 0.27
CMTM3-202ENST00000424011 TNK2Q07912 1038 aa16.76■□□□□ 0.27
CMTM3-202ENST00000424011 IL10RBQ08334 325 aa16.76■□□□□ 0.27
CMTM3-202ENST00000424011 CES4AQ5XG92 561 aa16.76■□□□□ 0.27
CMTM3-202ENST00000424011 ZNF354CQ86Y25 554 aa16.76■□□□□ 0.27
CMTM3-202ENST00000424011 PLD4Q96BZ4 506 aa16.76■□□□□ 0.27
CMTM3-202ENST00000424011 TRMT2BQ96GJ1 504 aaKnown RBP16.76■□□□□ 0.27
CMTM3-202ENST00000424011 RAB3IPQ96QF0 476 aaPredicted RBP16.76■□□□□ 0.27
CMTM3-202ENST00000424011 KCNK13Q9HB14 408 aa16.76■□□□□ 0.27
CMTM3-202ENST00000424011 CHRAC1Q9NRG0 131 aa16.76■□□□□ 0.27
CMTM3-202ENST00000424011 VPS45Q9NRW7 570 aa16.76■□□□□ 0.27
CMTM3-202ENST00000424011 MAFFQ9ULX9 164 aa16.76■□□□□ 0.27
CMTM3-202ENST00000424011 PCDHGA4Q9Y5G9 962 aa16.76■□□□□ 0.27
CMTM3-202ENST00000424011 A0A0G2JND7 137 aa16.76■□□□□ 0.27
CMTM3-202ENST00000424011 KLF11O14901 512 aa16.76■□□□□ 0.27
CMTM3-202ENST00000424011 ACSL4O60488 711 aa16.76■□□□□ 0.27
CMTM3-202ENST00000424011 PEX11BO96011 259 aa16.76■□□□□ 0.27
CMTM3-202ENST00000424011 ALDOAP04075 364 aaKnown RBP16.76■□□□□ 0.27
CMTM3-202ENST00000424011 ACRP10323 421 aa16.76■□□□□ 0.27
CMTM3-202ENST00000424011 C5orf22Q49AR2 442 aa16.76■□□□□ 0.27
CMTM3-202ENST00000424011 RNF220Q5VTB9 566 aa16.76■□□□□ 0.27
CMTM3-202ENST00000424011 OR52E8Q6IFG1 317 aa16.76■□□□□ 0.27
CMTM3-202ENST00000424011 KYAT3Q6YP21 454 aaKnown RBP16.76■□□□□ 0.27
CMTM3-202ENST00000424011 MTDHQ86UE4 582 aaKnown RBP16.76■□□□□ 0.27
CMTM3-202ENST00000424011 KCNMB4Q86W47 210 aa16.76■□□□□ 0.27
CMTM3-202ENST00000424011 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.76■□□□□ 0.27
CMTM3-202ENST00000424011 PPHLN1Q8NEY8 458 aaKnown RBP16.76■□□□□ 0.27
CMTM3-202ENST00000424011 AZIN2Q96A70 460 aa16.76■□□□□ 0.27
CMTM3-202ENST00000424011 ZNF419Q96HQ0 510 aaPredicted RBP16.76■□□□□ 0.27
CMTM3-202ENST00000424011 FICDQ9BVA6 458 aa16.76■□□□□ 0.27
CMTM3-202ENST00000424011 TXLNGQ9NUQ3 528 aa16.76■□□□□ 0.27
CMTM3-202ENST00000424011 PCDH10Q9P2E7 1040 aa16.76■□□□□ 0.27
CMTM3-202ENST00000424011 HAO1Q9UJM8 370 aa16.76■□□□□ 0.27
CMTM3-202ENST00000424011 TGDSO95455 350 aa16.75■□□□□ 0.27
CMTM3-202ENST00000424011 SEC24AO95486 1093 aa16.75■□□□□ 0.27
CMTM3-202ENST00000424011 IL1BP01584 269 aa16.75■□□□□ 0.27
CMTM3-202ENST00000424011 T-ENOLP0DO92 83 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms