RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 FAM221BA6H8Z2 402 aa22.28■■□□□ 1.16
TRAF4-204ENST00000422344 LATO43561 262 aa22.28■■□□□ 1.16
TRAF4-204ENST00000422344 GJB3O75712 270 aa22.28■■□□□ 1.16
TRAF4-204ENST00000422344 GSRP00390 522 aa22.28■■□□□ 1.16
TRAF4-204ENST00000422344 MAT2AP31153 395 aaKnown RBP22.28■■□□□ 1.16
TRAF4-204ENST00000422344 PCK1P35558 622 aa22.28■■□□□ 1.16
TRAF4-204ENST00000422344 ZNF135P52742 658 aaPredicted RBP22.28■■□□□ 1.16
TRAF4-204ENST00000422344 HNRNPDQ14103 355 aaKnown RBP22.28■■□□□ 1.16
TRAF4-204ENST00000422344 PIGHQ14442 188 aaPredicted RBP22.28■■□□□ 1.16
TRAF4-204ENST00000422344 TRIP6Q15654 476 aaKnown RBP22.28■■□□□ 1.16
TRAF4-204ENST00000422344 RFX8Q6ZV50 586 aa22.28■■□□□ 1.16
TRAF4-204ENST00000422344 RAB44Q7Z6P3 723 aaPredicted RBP22.28■■□□□ 1.16
TRAF4-204ENST00000422344 TRIM69Q86WT6 500 aa22.28■■□□□ 1.16
TRAF4-204ENST00000422344 PLPP6Q8IY26 295 aa22.28■■□□□ 1.16
TRAF4-204ENST00000422344 OR2AP1Q8NGE2 309 aa22.28■■□□□ 1.16
TRAF4-204ENST00000422344 OR8K1Q8NGG5 319 aa22.28■■□□□ 1.16
TRAF4-204ENST00000422344 KCTD15Q96SI1 283 aaPredicted RBP22.28■■□□□ 1.16
TRAF4-204ENST00000422344 NUP85Q9BW27 656 aa22.28■■□□□ 1.16
TRAF4-204ENST00000422344 HDAC8Q9BY41 377 aa22.28■■□□□ 1.16
TRAF4-204ENST00000422344 DEF6Q9H4E7 631 aa22.28■■□□□ 1.16
TRAF4-204ENST00000422344 EBF2Q9HAK2 575 aa22.28■■□□□ 1.16
TRAF4-204ENST00000422344 IL21RQ9HBE5 538 aa22.28■■□□□ 1.16
TRAF4-204ENST00000422344 TM7SF3Q9NS93 570 aa22.28■■□□□ 1.16
TRAF4-204ENST00000422344 IP6K2Q9UHH9 426 aa22.28■■□□□ 1.16
TRAF4-204ENST00000422344 ITPR1Q14643 2758 aa22.28■■□□□ 1.16
TRAF4-204ENST00000422344 KRIT1O00522 736 aa22.27■■□□□ 1.16
TRAF4-204ENST00000422344 VILLO15195 856 aa22.27■■□□□ 1.16
TRAF4-204ENST00000422344 RNGTTO60942 597 aaKnown RBP22.27■■□□□ 1.16
TRAF4-204ENST00000422344 PLXNA2O75051 1894 aa22.27■■□□□ 1.16
TRAF4-204ENST00000422344 TMCC1O94876 653 aa22.27■■□□□ 1.16
TRAF4-204ENST00000422344 ZNF883P0CG24 379 aa22.27■■□□□ 1.16
TRAF4-204ENST00000422344 ITGB7P26010 798 aa22.27■■□□□ 1.16
TRAF4-204ENST00000422344 CD38P28907 300 aa22.27■■□□□ 1.16
TRAF4-204ENST00000422344 HNRNPH3P31942 346 aaKnown RBP22.27■■□□□ 1.16
TRAF4-204ENST00000422344 EIF4A3P38919 411 aaKnown RBP22.27■■□□□ 1.16
TRAF4-204ENST00000422344 NEK3P51956 506 aa22.27■■□□□ 1.16
TRAF4-204ENST00000422344 NDST2P52849 883 aa22.27■■□□□ 1.16
TRAF4-204ENST00000422344 SERINC3Q13530 473 aa22.27■■□□□ 1.16
TRAF4-204ENST00000422344 SETMARQ53H47 684 aaPredicted RBP22.27■■□□□ 1.16
TRAF4-204ENST00000422344 NAPEPLDQ6IQ20 393 aa22.27■■□□□ 1.16
TRAF4-204ENST00000422344 FBXL19Q6PCT2 694 aa22.27■■□□□ 1.16
TRAF4-204ENST00000422344 OR6K2Q8NGY2 324 aa22.27■■□□□ 1.16
TRAF4-204ENST00000422344 LRIG1Q96JA1 1093 aa22.27■■□□□ 1.16
TRAF4-204ENST00000422344 GDAP1L1Q96MZ0 367 aa22.27■■□□□ 1.16
TRAF4-204ENST00000422344 ANAPC7Q9UJX3 599 aa22.27■■□□□ 1.16
TRAF4-204ENST00000422344 DMTF1Q9Y222 760 aa22.27■■□□□ 1.16
TRAF4-204ENST00000422344 FNDC3AQ9Y2H6 1198 aaKnown RBP22.27■■□□□ 1.16
TRAF4-204ENST00000422344 PCDHB9Q9Y5E1 797 aa22.27■■□□□ 1.16
TRAF4-204ENST00000422344 CHD5Q8TDI0 1954 aa22.27■■□□□ 1.15
TRAF4-204ENST00000422344 TAF4O00268 1085 aa22.26■■□□□ 1.15
TRAF4-204ENST00000422344 PCDH8O95206 1070 aa22.26■■□□□ 1.15
TRAF4-204ENST00000422344 IGSF6O95976 241 aa22.26■■□□□ 1.15
TRAF4-204ENST00000422344 CYP1A2P05177 515 aa22.26■■□□□ 1.15
TRAF4-204ENST00000422344 TAS2R38P59533 333 aa22.26■■□□□ 1.15
TRAF4-204ENST00000422344 RHOAP61586 193 aa22.26■■□□□ 1.15
TRAF4-204ENST00000422344 RAD51Q06609 339 aa22.26■■□□□ 1.15
TRAF4-204ENST00000422344 INO80DQ53TQ3 878 aaPredicted RBP22.26■■□□□ 1.15
TRAF4-204ENST00000422344 NEK5Q6P3R8 708 aa22.26■■□□□ 1.15
TRAF4-204ENST00000422344 VSTM4Q8IW00 320 aa22.26■■□□□ 1.15
TRAF4-204ENST00000422344 NAXDQ8IW45 347 aa22.26■■□□□ 1.15
TRAF4-204ENST00000422344 SETD7Q8WTS6 366 aaKnown RBP22.26■■□□□ 1.15
TRAF4-204ENST00000422344 CELF6Q96J87 481 aaKnown RBP22.26■■□□□ 1.15
TRAF4-204ENST00000422344 ZWILCHQ9H900 591 aa22.26■■□□□ 1.15
TRAF4-204ENST00000422344 LAMA5O15230 3695 aa22.26■■□□□ 1.15
TRAF4-204ENST00000422344 ARHGAP42A6NI28 874 aa22.25■■□□□ 1.15
TRAF4-204ENST00000422344 C10orf142B7Z368 130 aa22.25■■□□□ 1.15
TRAF4-204ENST00000422344 H3BRJ5 948 aa22.25■■□□□ 1.15
TRAF4-204ENST00000422344 POP4O95707 220 aaKnown RBP22.25■■□□□ 1.15
TRAF4-204ENST00000422344 ARL4AP40617 200 aa22.25■■□□□ 1.15
TRAF4-204ENST00000422344 CTSKP43235 329 aa22.25■■□□□ 1.15
TRAF4-204ENST00000422344 CCT8P50990 548 aa22.25■■□□□ 1.15
TRAF4-204ENST00000422344 SUZ12Q15022 739 aaKnown RBP22.25■■□□□ 1.15
TRAF4-204ENST00000422344 BOLA3Q53S33 107 aa22.25■■□□□ 1.15
TRAF4-204ENST00000422344 KCNT1Q5JUK3 1230 aa22.25■■□□□ 1.15
TRAF4-204ENST00000422344 PNPLA1Q8N8W4 532 aa22.25■■□□□ 1.15
TRAF4-204ENST00000422344 HSPH1Q92598 858 aa22.25■■□□□ 1.15
TRAF4-204ENST00000422344 DNAJC7Q99615 494 aa22.25■■□□□ 1.15
TRAF4-204ENST00000422344 OSBPL1AQ9BXW6 950 aa22.25■■□□□ 1.15
TRAF4-204ENST00000422344 KLC2Q9H0B6 622 aa22.25■■□□□ 1.15
TRAF4-204ENST00000422344 UBA2Q9UBT2 640 aaPredicted RBP22.25■■□□□ 1.15
TRAF4-204ENST00000422344 A0A1W2PQU0 124 aa22.24■■□□□ 1.15
TRAF4-204ENST00000422344 MYO1FO00160 1098 aa22.24■■□□□ 1.15
TRAF4-204ENST00000422344 RNF103O00237 685 aa22.24■■□□□ 1.15
TRAF4-204ENST00000422344 DFNA5O60443 496 aa22.24■■□□□ 1.15
TRAF4-204ENST00000422344 ADRB3P13945 408 aa22.24■■□□□ 1.15
TRAF4-204ENST00000422344 ERCC2P18074 760 aa22.24■■□□□ 1.15
TRAF4-204ENST00000422344 SSR1P43307 286 aaKnown RBP22.24■■□□□ 1.15
TRAF4-204ENST00000422344 HCAR3P49019 387 aa22.24■■□□□ 1.15
TRAF4-204ENST00000422344 STAT4Q14765 748 aa22.24■■□□□ 1.15
TRAF4-204ENST00000422344 SMTNL2Q2TAL5 461 aa22.24■■□□□ 1.15
TRAF4-204ENST00000422344 MYLK3Q32MK0 819 aa22.24■■□□□ 1.15
TRAF4-204ENST00000422344 ATXN7L2Q5T6C5 722 aaPredicted RBP22.24■■□□□ 1.15
TRAF4-204ENST00000422344 CYP4V2Q6ZWL3 525 aaPredicted RBP22.24■■□□□ 1.15
TRAF4-204ENST00000422344 NIPA2Q8N8Q9 360 aa22.24■■□□□ 1.15
TRAF4-204ENST00000422344 CTNNBL1Q8WYA6 563 aaPredicted RBP22.24■■□□□ 1.15
TRAF4-204ENST00000422344 ARHGEF26Q96DR7 871 aa22.24■■□□□ 1.15
TRAF4-204ENST00000422344 BTBD6Q96KE9 485 aa22.24■■□□□ 1.15
TRAF4-204ENST00000422344 LRRC19Q9H756 370 aa22.24■■□□□ 1.15
TRAF4-204ENST00000422344 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.24■■□□□ 1.15
TRAF4-204ENST00000422344 CTTNBP2NLQ9P2B4 639 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms