RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 MEI4A8MW99 385 aa15.99■□□□□ 0.15
BRAT1-202ENST00000421712 CST8O60676 142 aa15.99■□□□□ 0.15
BRAT1-202ENST00000421712 SEMA4FO95754 770 aa15.99■□□□□ 0.15
BRAT1-202ENST00000421712 IGLV3-19P01714 112 aa15.99■□□□□ 0.15
BRAT1-202ENST00000421712 RETP07949 1114 aa15.99■□□□□ 0.15
BRAT1-202ENST00000421712 RENBPP51606 427 aa15.99■□□□□ 0.15
BRAT1-202ENST00000421712 ZNF33AQ06730 810 aa15.99■□□□□ 0.15
BRAT1-202ENST00000421712 CNTN1Q12860 1018 aa15.99■□□□□ 0.15
BRAT1-202ENST00000421712 SLC10A2Q12908 348 aaPredicted RBP15.99■□□□□ 0.15
BRAT1-202ENST00000421712 SYCP2LQ5T4T6 812 aa15.99■□□□□ 0.15
BRAT1-202ENST00000421712 MARC1Q5VT66 337 aa15.99■□□□□ 0.15
BRAT1-202ENST00000421712 LYSMD4Q5XG99 296 aa15.99■□□□□ 0.15
BRAT1-202ENST00000421712 SLC9A4Q6AI14 798 aa15.99■□□□□ 0.15
BRAT1-202ENST00000421712 NPNTQ6UXI9 565 aa15.99■□□□□ 0.15
BRAT1-202ENST00000421712 CYP2U1Q7Z449 544 aa15.99■□□□□ 0.15
BRAT1-202ENST00000421712 ALYREFQ86V81 257 aaKnown RBP15.99■□□□□ 0.15
BRAT1-202ENST00000421712 PLD5Q8N7P1 536 aa15.99■□□□□ 0.15
BRAT1-202ENST00000421712 TSEN2Q8NCE0 465 aaKnown RBP15.99■□□□□ 0.15
BRAT1-202ENST00000421712 LRRN4Q8WUT4 740 aa15.99■□□□□ 0.15
BRAT1-202ENST00000421712 SNX19Q92543 992 aa15.99■□□□□ 0.15
BRAT1-202ENST00000421712 RUBCNQ92622 972 aa15.99■□□□□ 0.15
BRAT1-202ENST00000421712 PIGKQ92643 395 aa15.99■□□□□ 0.15
BRAT1-202ENST00000421712 FOXJ1Q92949 421 aa15.99■□□□□ 0.15
BRAT1-202ENST00000421712 HSPA12BQ96MM6 686 aa15.99■□□□□ 0.15
BRAT1-202ENST00000421712 ALS2CR12Q96Q35 445 aa15.99■□□□□ 0.15
BRAT1-202ENST00000421712 HEMGNQ9BXL5 484 aa15.99■□□□□ 0.15
BRAT1-202ENST00000421712 ARRDC1-AS1Q9H2J1 176 aa15.99■□□□□ 0.15
BRAT1-202ENST00000421712 DTLQ9NZJ0 730 aa15.99■□□□□ 0.15
BRAT1-202ENST00000421712 LHX3Q9UBR4 397 aa15.99■□□□□ 0.15
BRAT1-202ENST00000421712 FZD4Q9ULV1 537 aa15.99■□□□□ 0.15
BRAT1-202ENST00000421712 PACSIN2Q9UNF0 486 aaPredicted RBP15.99■□□□□ 0.15
BRAT1-202ENST00000421712 WASF2Q9Y6W5 498 aa15.99■□□□□ 0.15
BRAT1-202ENST00000421712 TBC1D3DA0A087WVF3 549 aa15.98■□□□□ 0.15
BRAT1-202ENST00000421712 TBC1D3IA0A087WXS9 549 aa15.98■□□□□ 0.15
BRAT1-202ENST00000421712 TBC1D3EA0A087X179 549 aa15.98■□□□□ 0.15
BRAT1-202ENST00000421712 TBC1D3KA0A087X1G2 549 aa15.98■□□□□ 0.15
BRAT1-202ENST00000421712 TBC1D3FA6NER0 549 aaPredicted RBP15.98■□□□□ 0.15
BRAT1-202ENST00000421712 LRRC72A6NJI9 287 aa15.98■□□□□ 0.15
BRAT1-202ENST00000421712 MIF4GDA9UHW6 222 aaKnown RBP15.98■□□□□ 0.15
BRAT1-202ENST00000421712 TBC1D3LB9A6J9 549 aa15.98■□□□□ 0.15
BRAT1-202ENST00000421712 INSIG1O15503 277 aa15.98■□□□□ 0.15
BRAT1-202ENST00000421712 FSBPO95073 299 aa15.98■□□□□ 0.15
BRAT1-202ENST00000421712 UGT2B4P06133 528 aa15.98■□□□□ 0.15
BRAT1-202ENST00000421712 TBC1D3HP0C7X1 549 aa15.98■□□□□ 0.15
BRAT1-202ENST00000421712 CCNCP24863 283 aa15.98■□□□□ 0.15
BRAT1-202ENST00000421712 PTGER3P43115 390 aa15.98■□□□□ 0.15
BRAT1-202ENST00000421712 SCNN1BP51168 640 aa15.98■□□□□ 0.15
BRAT1-202ENST00000421712 COPS2P61201 443 aa15.98■□□□□ 0.15
BRAT1-202ENST00000421712 ITKQ08881 620 aa15.98■□□□□ 0.15
BRAT1-202ENST00000421712 SLC10A7Q0GE19 358 aa15.98■□□□□ 0.15
BRAT1-202ENST00000421712 AP1B1Q10567 949 aa15.98■□□□□ 0.15
BRAT1-202ENST00000421712 PDK1Q15118 436 aa15.98■□□□□ 0.15
BRAT1-202ENST00000421712 SPDYCQ5MJ68 293 aa15.98■□□□□ 0.15
BRAT1-202ENST00000421712 CFAP58Q5T655 872 aa15.98■□□□□ 0.15
BRAT1-202ENST00000421712 TBC1D3GQ6DHY5 549 aa15.98■□□□□ 0.15
BRAT1-202ENST00000421712 TBC1D3CQ6IPX1 549 aa15.98■□□□□ 0.15
BRAT1-202ENST00000421712 FBXL19Q6PCT2 694 aa15.98■□□□□ 0.15
BRAT1-202ENST00000421712 BZW1Q7L1Q6 419 aaKnown RBP15.98■□□□□ 0.15
BRAT1-202ENST00000421712 TBC1D3Q8IZP1 549 aaPredicted RBP15.98■□□□□ 0.15
BRAT1-202ENST00000421712 DCLK2Q8N568 766 aa15.98■□□□□ 0.15
BRAT1-202ENST00000421712 ARRDC3Q96B67 414 aa15.98■□□□□ 0.15
BRAT1-202ENST00000421712 LRIG1Q96JA1 1093 aa15.98■□□□□ 0.15
BRAT1-202ENST00000421712 PDLIM2Q96JY6 352 aa15.98■□□□□ 0.15
BRAT1-202ENST00000421712 OSBPL1AQ9BXW6 950 aa15.98■□□□□ 0.15
BRAT1-202ENST00000421712 NUMA1Q14980 2115 aa15.98■□□□□ 0.15
BRAT1-202ENST00000421712 GON4LQ3T8J9 2241 aa15.98■□□□□ 0.15
BRAT1-202ENST00000421712 hCG_1818297A0A087WSY0 165 aa15.97■□□□□ 0.15
BRAT1-202ENST00000421712 PPP1R12AO14974 1030 aaPredicted RBP15.97■□□□□ 0.15
BRAT1-202ENST00000421712 C7P10643 843 aa15.97■□□□□ 0.15
BRAT1-202ENST00000421712 DRD3P35462 400 aa15.97■□□□□ 0.15
BRAT1-202ENST00000421712 MMP13P45452 471 aa15.97■□□□□ 0.15
BRAT1-202ENST00000421712 SPEM2Q0P670 501 aa15.97■□□□□ 0.15
BRAT1-202ENST00000421712 CCDC6Q16204 474 aa15.97■□□□□ 0.15
BRAT1-202ENST00000421712 ZNF805Q5CZA5 627 aa15.97■□□□□ 0.15
BRAT1-202ENST00000421712 DCAF12L1Q5VU92 463 aa15.97■□□□□ 0.15
BRAT1-202ENST00000421712 NCEH1Q6PIU2 408 aa15.97■□□□□ 0.15
BRAT1-202ENST00000421712 GDPD4Q6W3E5 623 aa15.97■□□□□ 0.15
BRAT1-202ENST00000421712 ZNF662Q6ZS27 426 aa15.97■□□□□ 0.15
BRAT1-202ENST00000421712 ERN2Q76MJ5 926 aaKnown RBP15.97■□□□□ 0.15
BRAT1-202ENST00000421712 SRLQ86TD4 932 aa15.97■□□□□ 0.15
BRAT1-202ENST00000421712 CCDC13Q8IYE1 715 aa15.97■□□□□ 0.15
BRAT1-202ENST00000421712 CADM4Q8NFZ8 388 aa15.97■□□□□ 0.15
BRAT1-202ENST00000421712 P3H4Q92791 437 aa15.97■□□□□ 0.15
BRAT1-202ENST00000421712 HAUS1Q96CS2 278 aa15.97■□□□□ 0.15
BRAT1-202ENST00000421712 ZNF419Q96HQ0 510 aaPredicted RBP15.97■□□□□ 0.15
BRAT1-202ENST00000421712 KLHL32Q96NJ5 620 aa15.97■□□□□ 0.15
BRAT1-202ENST00000421712 LGMNQ99538 433 aa15.97■□□□□ 0.15
BRAT1-202ENST00000421712 MIR1-1HGQ9H1L0 117 aa15.97■□□□□ 0.15
BRAT1-202ENST00000421712 C6orf106Q9H6K1 298 aaPredicted RBP15.97■□□□□ 0.15
BRAT1-202ENST00000421712 NT5MQ9NPB1 228 aa15.97■□□□□ 0.15
BRAT1-202ENST00000421712 HAUS2Q9NVX0 235 aa15.97■□□□□ 0.15
BRAT1-202ENST00000421712 TTLL3Q9Y4R7 772 aa15.97■□□□□ 0.15
BRAT1-202ENST00000421712 CEP192Q8TEP8 1941 aa15.97■□□□□ 0.15
BRAT1-202ENST00000421712 PLXND1Q9Y4D7 1925 aa15.97■□□□□ 0.15
BRAT1-202ENST00000421712 METTL12A8MUP2 240 aa15.96■□□□□ 0.15
BRAT1-202ENST00000421712 RNF103O00237 685 aa15.96■□□□□ 0.15
BRAT1-202ENST00000421712 MATN3O15232 486 aa15.96■□□□□ 0.15
BRAT1-202ENST00000421712 SLC7A4O43246 635 aa15.96■□□□□ 0.15
BRAT1-202ENST00000421712 EPN2O95208 641 aa15.96■□□□□ 0.15
BRAT1-202ENST00000421712 PIGNO95427 931 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms