RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, human

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BDNF-208	ENST00000418212	TEX44	Q53QW1	395 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	ARHGEF4	Q9NR80	690 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	CACNA2D2	Q9NY47	1150 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	KL	Q9UEF7	1012 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	F5	P12259	2224 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	SEPT4	O43236	478 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	HCRT	O43612	131 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	TBC1D4	O60343	1298 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	PLCL1	Q15111	1095 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	SLC39A4	Q6P5W5	647 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	FNIP1	Q8TF40	1166 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	NKD2	Q969F2	451 aa	Predicted RBP	13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	ZMAT2	Q96NC0	199 aa	Known RBP	13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	TBCD	Q9BTW9	1192 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	RERGL	Q9H628	205 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	ASAH2	Q9NR71	780 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	SNX15	Q9NRS6	342 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	ZNHIT2	Q9UHR6	403 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	SLIT2	O94813	1529 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	ALAD	P13716	330 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	DRD4	P21917	467 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	GRIA4	P48058	902 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	CDK7	P50613	346 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	CA9	Q16790	459 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	TRMT5	Q32P41	509 aa	Known RBP	13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	FBXO48	Q5FWF7	155 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	ARMC6	Q6NXE6	501 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	IL27RA	Q6UWB1	636 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	LINGO4	Q6UY18	593 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	MCOLN3	Q8TDD5	553 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	PYDC1	Q8WXC3	89 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	APBB2	Q92870	758 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	FAM120B	Q96EK7	910 aa	Known RBP	13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	SCLY	Q96I15	445 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	NDUFAF1	Q9Y375	327 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	RAD54B	Q9Y620	910 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	COL1A2	P08123	1366 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	XYLB	O75191	536 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	IGFBP4	P22692	258 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	GSS	P48637	474 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	RPL14	P50914	215 aa	Known RBP	13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	TRAF2	Q12933	501 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	CRY1	Q16526	586 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	CWF19L1	Q69YN2	538 aa	Known RBP	13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	PACS1	Q6VY07	963 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	MICU2	Q8IYU8	434 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	FAM81A	Q8TBF8	368 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	SERAC1	Q96JX3	654 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	KCTD15	Q96SI1	283 aa	Predicted RBP	13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	SMAD5	Q99717	465 aa	Known RBP	13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	MYOC	Q99972	504 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	BBS2	Q9BXC9	721 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	PCDHGC3	Q9UN70	934 aa		13.37	□□□□□ -0.27
BDNF-208	ENST00000418212	C2CD4B	A6NLJ0	364 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	HNRNPCL2	B2RXH8	293 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	ENTPD5	O75356	428 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	POLR2E	P19388	210 aa	Known RBP	13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	GPD2	P43304	727 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	GDF10	P55107	478 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	MRPS22	P82650	360 aa	Known RBP	13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	DSG1	Q02413	1049 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	SEMA5A	Q13591	1074 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	KPNB1	Q14974	876 aa	Known RBP	13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	SLC1A5	Q15758	541 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	FNDC3B	Q53EP0	1204 aa	Known RBP	13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	FNBP1L	Q5T0N5	605 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	ANKS1B	Q7Z6G8	1248 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	CIR1	Q86X95	450 aa	Predicted RBP	13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	PCDH19	Q8TAB3	1148 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	SPPL2B	Q8TCT7	592 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	UROC1	Q96N76	676 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	CROT	Q9UKG9	612 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	ANKRD12	Q6UB98	2062 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	DPPA5	A6NC42	116 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	C2orf71	A6NGG8	1288 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	MGRN1	O60291	552 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	NTRK1	P04629	796 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	ATP5B	P06576	529 aa	Known RBP	13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	TYMP	P19971	482 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	MSX2	P35548	267 aa	Predicted RBP	13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	HPCA	P84074	193 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	PPM1J	Q5JR12	505 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	SPDYC	Q5MJ68	293 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	CNST	Q6PJW8	725 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	FIBCD1	Q8N539	461 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	DCBLD1	Q8N8Z6	715 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	PLEKHA8	Q96JA3	519 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	TEPSIN	Q96N21	525 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	TBC1D10A	Q9BXI6	508 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	GLOD4	Q9HC38	313 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	SPG21	Q9NZD8	308 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	POLG2	Q9UHN1	485 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	DYRK1B	Q9Y463	629 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	TELO2	Q9Y4R8	837 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	PCDHA11	Q9Y5I1	949 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212		A8MUI8	341 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	CXCL14	O95715	111 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	ABHD2	P08910	425 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	LTA4H	P09960	611 aa	Known RBP	13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	SOWAHA	Q2M3V2	549 aa		13.36	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms