RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 LRRC74AQ0VAA2 488 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 OVGP1Q12889 678 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 DDX39BQ13838 428 aaKnown RBP12.09□□□□□ -0.47
PTPRF-205ENST00000414879 UNC5AQ6ZN44 842 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 KRT78Q8N1N4 520 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 PCED1BQ96HM7 432 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 ZNF599Q96NL3 588 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 YIPF2Q9BWQ6 316 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 OSGEPL1Q9H4B0 414 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 RHOJQ9H4E5 214 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 MIEF1Q9NQG6 463 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 FETUBQ9UGM5 382 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 FBXO5Q9UKT4 447 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 DTNAQ9Y4J8 743 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 BCORQ6W2J9 1755 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 PLOD1Q02809 727 aaPredicted RBP12.09□□□□□ -0.47
PTPRF-205ENST00000414879 IL10RBQ08334 325 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 AUHQ13825 339 aaKnown RBP12.09□□□□□ -0.47
PTPRF-205ENST00000414879 FRG1Q14331 258 aaKnown RBP12.09□□□□□ -0.47
PTPRF-205ENST00000414879 TARBP2Q15633 366 aaKnown RBP12.09□□□□□ -0.47
PTPRF-205ENST00000414879 TRIP10Q15642 601 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 WASHC2DQ5SRD0 308 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 NPNTQ6UXI9 565 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 MIER2Q8N344 545 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 PLD5Q8N7P1 536 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 PXYLP1Q8TE99 480 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 CNDP1Q96KN2 507 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 RIPOR3Q96MK2 946 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 KLHL28Q9NXS3 571 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 GMIPQ9P107 970 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 FBXL21Q9UKT6 434 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 ASLP04424 464 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 FLT3P36888 993 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 HPCAL1P37235 193 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 ATP13A4Q4VNC1 1196 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 GPR158Q5T848 1215 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 PMF1Q6P1K2 205 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 ZFP1Q6P2D0 407 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 DBF4BQ8NFT6 615 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 SLC4A5Q9BY07 1137 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 BCO2Q9BYV7 579 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 GBA3Q9H227 469 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 MID1IP1Q9NPA3 183 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 CLIC5Q9NZA1 410 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 H2AFY2Q9P0M6 372 aaPredicted RBP12.09□□□□□ -0.47
PTPRF-205ENST00000414879 DEC1Q9P2X7 70 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 NUDT5Q9UKK9 219 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 SCN7AQ01118 1682 aa12.08□□□□□ -0.47
PTPRF-205ENST00000414879 KCNU1A8MYU2 1149 aa12.08□□□□□ -0.47
PTPRF-205ENST00000414879 E9PAM4 449 aa12.08□□□□□ -0.47
PTPRF-205ENST00000414879 MATN3O15232 486 aa12.08□□□□□ -0.47
PTPRF-205ENST00000414879 PRNPP04156 253 aa12.08□□□□□ -0.47
PTPRF-205ENST00000414879 APODP05090 189 aa12.08□□□□□ -0.47
PTPRF-205ENST00000414879 CLTBP09497 229 aa12.08□□□□□ -0.47
PTPRF-205ENST00000414879 CYP51A1Q16850 503 aa12.08□□□□□ -0.47
PTPRF-205ENST00000414879 CENPLQ8N0S6 344 aaPredicted RBP12.08□□□□□ -0.47
PTPRF-205ENST00000414879 TMCO5AQ8N6Q1 288 aa12.08□□□□□ -0.47
PTPRF-205ENST00000414879 KAT2BQ92831 832 aa12.08□□□□□ -0.47
PTPRF-205ENST00000414879 TCF12Q99081 682 aa12.08□□□□□ -0.47
PTPRF-205ENST00000414879 IGFLR1Q9H665 355 aa12.08□□□□□ -0.47
PTPRF-205ENST00000414879 VRTNQ9H8Y1 702 aa12.08□□□□□ -0.47
PTPRF-205ENST00000414879 ATAD3AQ9NVI7 634 aa12.08□□□□□ -0.47
PTPRF-205ENST00000414879 FBXW11Q9UKB1 542 aa12.08□□□□□ -0.47
PTPRF-205ENST00000414879 TLL2Q9Y6L7 1015 aa12.08□□□□□ -0.47
PTPRF-205ENST00000414879 PRR23AA6NEV1 266 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 NCF1BA6NI72 391 aaPredicted RBP12.08□□□□□ -0.48
PTPRF-205ENST00000414879 NCF1CA8MVU1 366 aaPredicted RBP12.08□□□□□ -0.48
PTPRF-205ENST00000414879 NCF1P14598 390 aaPredicted RBP12.08□□□□□ -0.48
PTPRF-205ENST00000414879 RRM2P31350 389 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 FMO4P31512 558 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 CHI3L1P36222 383 aaPredicted RBP12.08□□□□□ -0.48
PTPRF-205ENST00000414879 MARCKSL1P49006 195 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 BOP1Q14137 746 aaKnown RBP12.08□□□□□ -0.48
PTPRF-205ENST00000414879 GALNTL6Q49A17 601 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 MFSD5Q6N075 450 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 RTL3Q8N8U3 475 aaKnown RBP12.08□□□□□ -0.48
PTPRF-205ENST00000414879 OR4L1Q8NH43 312 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 PIWIL2Q8TC59 973 aaKnown RBP12.08□□□□□ -0.48
PTPRF-205ENST00000414879 ZBED3Q96IU2 234 aaPredicted RBP12.08□□□□□ -0.48
PTPRF-205ENST00000414879 ACOX2Q99424 681 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 COPS8Q99627 209 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 SSU72Q9NP77 194 aaKnown RBP12.08□□□□□ -0.48
PTPRF-205ENST00000414879 ARL15Q9NXU5 204 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 AKAP7Q9P0M2 348 aaPredicted RBP12.08□□□□□ -0.48
PTPRF-205ENST00000414879 ZNF180Q9UJW8 692 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 TMCC3Q9ULS5 477 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 NDUFAF1Q9Y375 327 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 INSL6Q9Y581 213 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 FAM237BA0A1B0GVD1 139 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 E7ENQ6 273 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 ZNF33AQ06730 810 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 KLC1Q07866 573 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 SLC35G1Q2M3R5 365 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 ARMC3Q5W041 872 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 TMEM110Q86TL2 294 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 FAM228AQ86W67 206 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 IFNLR1Q8IU57 520 aaPredicted RBP12.08□□□□□ -0.48
PTPRF-205ENST00000414879 STYXQ8WUJ0 223 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 SMG7Q92540 1137 aaKnown RBP12.08□□□□□ -0.48
PTPRF-205ENST00000414879 MYO19Q96H55 970 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms