RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 RDH11Q8TC12 318 aa17.45■□□□□ 0.38
PHRF1-202ENST00000413872 OXNAD1Q96HP4 312 aaPredicted RBP17.45■□□□□ 0.38
PHRF1-202ENST00000413872 HNRNPABQ99729 332 aaKnown RBP17.45■□□□□ 0.38
PHRF1-202ENST00000413872 GOLGA2P5Q9HBQ8 144 aa17.45■□□□□ 0.38
PHRF1-202ENST00000413872 ADPRHL2Q9NX46 363 aa17.45■□□□□ 0.38
PHRF1-202ENST00000413872 MT-CO1P00395 513 aa17.45■□□□□ 0.38
PHRF1-202ENST00000413872 CCDC166P0CW27 439 aa17.45■□□□□ 0.38
PHRF1-202ENST00000413872 RHOQP17081 205 aa17.45■□□□□ 0.38
PHRF1-202ENST00000413872 LBPP18428 481 aa17.45■□□□□ 0.38
PHRF1-202ENST00000413872 PRKCZQ05513 592 aa17.45■□□□□ 0.38
PHRF1-202ENST00000413872 PTPRNQ16849 979 aa17.45■□□□□ 0.38
PHRF1-202ENST00000413872 FBXW10Q5XX13 1052 aa17.45■□□□□ 0.38
PHRF1-202ENST00000413872 TXNDC11Q6PKC3 985 aa17.45■□□□□ 0.38
PHRF1-202ENST00000413872 PLEKHM3Q6ZWE6 761 aa17.45■□□□□ 0.38
PHRF1-202ENST00000413872 PHC3Q8NDX5 983 aa17.45■□□□□ 0.38
PHRF1-202ENST00000413872 ACTRT2Q8TDY3 377 aa17.45■□□□□ 0.38
PHRF1-202ENST00000413872 SELENOMQ8WWX9 145 aa17.45■□□□□ 0.38
PHRF1-202ENST00000413872 USP6NLQ92738 828 aa17.45■□□□□ 0.38
PHRF1-202ENST00000413872 USP7Q93009 1102 aa17.45■□□□□ 0.38
PHRF1-202ENST00000413872 ZMYM5Q9UJ78 669 aa17.45■□□□□ 0.38
PHRF1-202ENST00000413872 SORCS3Q9UPU3 1222 aa17.45■□□□□ 0.38
PHRF1-202ENST00000413872 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.45■□□□□ 0.38
PHRF1-202ENST00000413872 CACNB4O00305 520 aaPredicted RBP17.45■□□□□ 0.38
PHRF1-202ENST00000413872 FCHO1O14526 889 aa17.45■□□□□ 0.38
PHRF1-202ENST00000413872 FAM153BP0C7A2 387 aa17.45■□□□□ 0.38
PHRF1-202ENST00000413872 ATP6V1B2P21281 511 aa17.45■□□□□ 0.38
PHRF1-202ENST00000413872 FAM153CQ494X1 144 aa17.45■□□□□ 0.38
PHRF1-202ENST00000413872 BEND7Q8N7W2 519 aaPredicted RBP17.45■□□□□ 0.38
PHRF1-202ENST00000413872 PAWRQ96IZ0 340 aaKnown RBP17.45■□□□□ 0.38
PHRF1-202ENST00000413872 FAIM2Q9BWQ8 316 aa17.45■□□□□ 0.38
PHRF1-202ENST00000413872 C10orf88Q9H8K7 445 aa17.45■□□□□ 0.38
PHRF1-202ENST00000413872 ARHGEF9O43307 516 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 PIGNO95427 931 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 ALG9Q9H6U8 611 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 KCNK4Q9NYG8 393 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 HBS1LQ9Y450 684 aaKnown RBP17.44■□□□□ 0.38
PHRF1-202ENST00000413872 GPR25O00155 361 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 GSTM1P09488 218 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 WNT3AP56704 352 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 CORO7P57737 925 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 CRYMQ14894 314 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 IYDQ6PHW0 289 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 DEFB107AQ8IZN7 70 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 ATAD1Q8NBU5 361 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 ZFP28Q8NHY6 868 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 ADGRA3Q8IWK6 1321 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 CNPP09543 421 aaKnown RBP17.44■□□□□ 0.38
PHRF1-202ENST00000413872 FASP25445 335 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 BLVRAP53004 296 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 ART4Q93070 314 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 LGMNQ99538 433 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 NTPCRQ9BSD7 190 aaKnown RBP17.44■□□□□ 0.38
PHRF1-202ENST00000413872 GLOD4Q9HC38 313 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 HPS4Q9NQG7 708 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 AASDHPPTQ9NRN7 309 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 SCTRP47872 440 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 NEK2P51955 445 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 HK2P52789 917 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 SLC5A3P53794 718 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 FAM187BQ17R55 369 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 RIPOR1Q6ZS17 1223 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 PAGE2Q7Z2X7 111 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 PIWIL4Q7Z3Z4 852 aaKnown RBP17.44■□□□□ 0.38
PHRF1-202ENST00000413872 XYLT1Q86Y38 959 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 ATG16L2Q8NAA4 619 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 ZBTB10Q96DT7 871 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 UGT2B28Q9BY64 529 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 MMADHCQ9H3L0 296 aaPredicted RBP17.44■□□□□ 0.38
PHRF1-202ENST00000413872 NOD2Q9HC29 1040 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 FBXO6Q9NRD1 293 aaPredicted RBP17.44■□□□□ 0.38
PHRF1-202ENST00000413872 TMEM216Q9P0N5 145 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 GMIPQ9P107 970 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 SLC27A6Q9Y2P4 619 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 ETS1P14921 441 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 RAB10P61026 200 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 RPS7P62081 194 aaKnown RBP17.44■□□□□ 0.38
PHRF1-202ENST00000413872 SPIDRQ14159 915 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 KPNB1Q14974 876 aaKnown RBP17.44■□□□□ 0.38
PHRF1-202ENST00000413872 PFKFB4Q16877 469 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 RBM23Q86U06 439 aaKnown RBP17.44■□□□□ 0.38
PHRF1-202ENST00000413872 MYO19Q96H55 970 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 MRPL57Q9BQC6 102 aaKnown RBP17.44■□□□□ 0.38
PHRF1-202ENST00000413872 BDH2Q9BUT1 245 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 FBXO5Q9UKT4 447 aa17.44■□□□□ 0.38
PHRF1-202ENST00000413872 MRPL42Q9Y6G3 142 aaKnown RBP17.44■□□□□ 0.38
PHRF1-202ENST00000413872 LTN1O94822 1766 aa17.43■□□□□ 0.38
PHRF1-202ENST00000413872 KLRG2A4D1S0 409 aaPredicted RBP17.43■□□□□ 0.38
PHRF1-202ENST00000413872 CLTBP09497 229 aa17.43■□□□□ 0.38
PHRF1-202ENST00000413872 PTPN9P43378 593 aa17.43■□□□□ 0.38
PHRF1-202ENST00000413872 NEK3P51956 506 aa17.43■□□□□ 0.38
PHRF1-202ENST00000413872 TAS2R40P59535 323 aa17.43■□□□□ 0.38
PHRF1-202ENST00000413872 SAMD4BQ5PRF9 694 aaKnown RBP17.43■□□□□ 0.38
PHRF1-202ENST00000413872 MARK2Q7KZI7 788 aaKnown RBP17.43■□□□□ 0.38
PHRF1-202ENST00000413872 JOSD2Q8TAC2 188 aa17.43■□□□□ 0.38
PHRF1-202ENST00000413872 BRI3BPQ8WY22 251 aa17.43■□□□□ 0.38
PHRF1-202ENST00000413872 STXBP5LQ9Y2K9 1186 aa17.43■□□□□ 0.38
PHRF1-202ENST00000413872 SLC35G4P0C7Q5 338 aa17.43■□□□□ 0.38
PHRF1-202ENST00000413872 ELFN1P0C7U0 828 aa17.43■□□□□ 0.38
PHRF1-202ENST00000413872 WARSP23381 471 aaKnown RBP17.43■□□□□ 0.38
PHRF1-202ENST00000413872 MBOAT7Q96N66 472 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms