RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 POLNQ7Z5Q5 900 aa19.15■□□□□ 0.66
TRIM56-202ENST00000412507 GAS2L3Q86XJ1 694 aa19.15■□□□□ 0.66
TRIM56-202ENST00000412507 ARHGAP12Q8IWW6 846 aa19.15■□□□□ 0.66
TRIM56-202ENST00000412507 NPWQ8N729 165 aa19.15■□□□□ 0.66
TRIM56-202ENST00000412507 TEKT4Q8WW24 435 aa19.15■□□□□ 0.66
TRIM56-202ENST00000412507 CASKIN2Q8WXE0 1202 aa19.15■□□□□ 0.66
TRIM56-202ENST00000412507 HDAC8Q9BY41 377 aa19.15■□□□□ 0.66
TRIM56-202ENST00000412507 PDFQ9HBH1 243 aa19.15■□□□□ 0.66
TRIM56-202ENST00000412507 DNAAF2Q9NVR5 837 aaKnown RBP19.15■□□□□ 0.66
TRIM56-202ENST00000412507 UBA2Q9UBT2 640 aaPredicted RBP19.15■□□□□ 0.66
TRIM56-202ENST00000412507 MFHAS1Q9Y4C4 1052 aa19.15■□□□□ 0.66
TRIM56-202ENST00000412507 DFFAO00273 331 aa19.14■□□□□ 0.65
TRIM56-202ENST00000412507 KRIT1O00522 736 aa19.14■□□□□ 0.65
TRIM56-202ENST00000412507 WNT9AO14904 365 aa19.14■□□□□ 0.65
TRIM56-202ENST00000412507 LATO43561 262 aa19.14■□□□□ 0.65
TRIM56-202ENST00000412507 RNGTTO60942 597 aaKnown RBP19.14■□□□□ 0.65
TRIM56-202ENST00000412507 GJB3O75712 270 aa19.14■□□□□ 0.65
TRIM56-202ENST00000412507 POP4O95707 220 aaKnown RBP19.14■□□□□ 0.65
TRIM56-202ENST00000412507 IGSF6O95976 241 aa19.14■□□□□ 0.65
TRIM56-202ENST00000412507 AMPD1P23109 780 aa19.14■□□□□ 0.65
TRIM56-202ENST00000412507 ITGB7P26010 798 aa19.14■□□□□ 0.65
TRIM56-202ENST00000412507 CYTH1Q15438 398 aa19.14■□□□□ 0.65
TRIM56-202ENST00000412507 KIF19Q2TAC6 998 aa19.14■□□□□ 0.65
TRIM56-202ENST00000412507 HLA-BQ31612 363 aa19.14■□□□□ 0.65
TRIM56-202ENST00000412507 MYLK3Q32MK0 819 aa19.14■□□□□ 0.65
TRIM56-202ENST00000412507 AFMIDQ63HM1 303 aa19.14■□□□□ 0.65
TRIM56-202ENST00000412507 ADAT2Q7Z6V5 191 aaKnown RBP19.14■□□□□ 0.65
TRIM56-202ENST00000412507 PRPF39Q86UA1 669 aaKnown RBP19.14■□□□□ 0.65
TRIM56-202ENST00000412507 TRIM69Q86WT6 500 aa19.14■□□□□ 0.65
TRIM56-202ENST00000412507 GAREM1Q9H706 876 aa19.14■□□□□ 0.65
TRIM56-202ENST00000412507 IL21RQ9HBE5 538 aa19.14■□□□□ 0.65
TRIM56-202ENST00000412507 PCDH18Q9HCL0 1135 aa19.14■□□□□ 0.65
TRIM56-202ENST00000412507 PREBQ9HCU5 417 aa19.14■□□□□ 0.65
TRIM56-202ENST00000412507 AASDHPPTQ9NRN7 309 aa19.14■□□□□ 0.65
TRIM56-202ENST00000412507 ETNK2Q9NVF9 386 aa19.14■□□□□ 0.65
TRIM56-202ENST00000412507 LHX3Q9UBR4 397 aa19.14■□□□□ 0.65
TRIM56-202ENST00000412507 ANKRD6Q9Y2G4 727 aa19.14■□□□□ 0.65
TRIM56-202ENST00000412507 SNX11Q9Y5W9 270 aa19.14■□□□□ 0.65
TRIM56-202ENST00000412507 GIPC1O14908 333 aa19.13■□□□□ 0.65
TRIM56-202ENST00000412507 PRAMEF11O60813 436 aa19.13■□□□□ 0.65
TRIM56-202ENST00000412507 PROSCO94903 275 aa19.13■□□□□ 0.65
TRIM56-202ENST00000412507 WNT1P04628 370 aa19.13■□□□□ 0.65
TRIM56-202ENST00000412507 GJC1P36383 396 aa19.13■□□□□ 0.65
TRIM56-202ENST00000412507 NOVA1P51513 510 aaKnown RBP19.13■□□□□ 0.65
TRIM56-202ENST00000412507 ZNF75DP51815 510 aa19.13■□□□□ 0.65
TRIM56-202ENST00000412507 NEK3P51956 506 aa19.13■□□□□ 0.65
TRIM56-202ENST00000412507 HADHQ16836 314 aaKnown RBP19.13■□□□□ 0.65
TRIM56-202ENST00000412507 ATP13A4Q4VNC1 1196 aa19.13■□□□□ 0.65
TRIM56-202ENST00000412507 PSAPL1Q6NUJ1 521 aa19.13■□□□□ 0.65
TRIM56-202ENST00000412507 FBXL19Q6PCT2 694 aa19.13■□□□□ 0.65
TRIM56-202ENST00000412507 IL27RAQ6UWB1 636 aa19.13■□□□□ 0.65
TRIM56-202ENST00000412507 ARHGAP36Q6ZRI8 547 aa19.13■□□□□ 0.65
TRIM56-202ENST00000412507 PARS2Q7L3T8 475 aaKnown RBP19.13■□□□□ 0.65
TRIM56-202ENST00000412507 TP53INP2Q8IXH6 220 aa19.13■□□□□ 0.65
TRIM56-202ENST00000412507 TC2NQ8N9U0 490 aa19.13■□□□□ 0.65
TRIM56-202ENST00000412507 DEFB124Q8NES8 71 aa19.13■□□□□ 0.65
TRIM56-202ENST00000412507 VOPP1Q96AW1 172 aa19.13■□□□□ 0.65
TRIM56-202ENST00000412507 SERAC1Q96JX3 654 aa19.13■□□□□ 0.65
TRIM56-202ENST00000412507 EXOC2Q96KP1 924 aa19.13■□□□□ 0.65
TRIM56-202ENST00000412507 GDAP1L1Q96MZ0 367 aa19.13■□□□□ 0.65
TRIM56-202ENST00000412507 CSPG4P5Q96PW8 444 aa19.13■□□□□ 0.65
TRIM56-202ENST00000412507 TPX2Q9ULW0 747 aaKnown RBP19.13■□□□□ 0.65
TRIM56-202ENST00000412507 C16orf96A6NNT2 1141 aa19.12■□□□□ 0.65
TRIM56-202ENST00000412507 TMEM110-MUSTN1A8MSY1 372 aa19.12■□□□□ 0.65
TRIM56-202ENST00000412507 PCDH8O95206 1070 aa19.12■□□□□ 0.65
TRIM56-202ENST00000412507 CER1O95813 267 aa19.12■□□□□ 0.65
TRIM56-202ENST00000412507 UGT2B4P06133 528 aa19.12■□□□□ 0.65
TRIM56-202ENST00000412507 ADRB3P13945 408 aa19.12■□□□□ 0.65
TRIM56-202ENST00000412507 CD59P13987 128 aa19.12■□□□□ 0.65
TRIM56-202ENST00000412507 CSRP1P21291 193 aaKnown RBP19.12■□□□□ 0.65
TRIM56-202ENST00000412507 CD38P28907 300 aa19.12■□□□□ 0.65
TRIM56-202ENST00000412507 CDH6P55285 790 aa19.12■□□□□ 0.65
TRIM56-202ENST00000412507 KRT81Q14533 505 aa19.12■□□□□ 0.65
TRIM56-202ENST00000412507 SLC35G2Q8TBE7 412 aa19.12■□□□□ 0.65
TRIM56-202ENST00000412507 TSC1Q92574 1164 aa19.12■□□□□ 0.65
TRIM56-202ENST00000412507 KLK6Q92876 244 aa19.12■□□□□ 0.65
TRIM56-202ENST00000412507 LRIG1Q96JA1 1093 aa19.12■□□□□ 0.65
TRIM56-202ENST00000412507 KLHL32Q96NJ5 620 aa19.12■□□□□ 0.65
TRIM56-202ENST00000412507 SP110Q9HB58 689 aa19.12■□□□□ 0.65
TRIM56-202ENST00000412507 A0A1W2PQU0 124 aa19.11■□□□□ 0.65
TRIM56-202ENST00000412507 A0A1W2PR77 199 aa19.11■□□□□ 0.65
TRIM56-202ENST00000412507 KCNK3O14649 394 aa19.11■□□□□ 0.65
TRIM56-202ENST00000412507 VILLO15195 856 aa19.11■□□□□ 0.65
TRIM56-202ENST00000412507 INSIG1O15503 277 aa19.11■□□□□ 0.65
TRIM56-202ENST00000412507 CD48P09326 243 aa19.11■□□□□ 0.65
TRIM56-202ENST00000412507 C21orf59P57076 290 aa19.11■□□□□ 0.65
TRIM56-202ENST00000412507 TAS2R40P59535 323 aa19.11■□□□□ 0.65
TRIM56-202ENST00000412507 RAD51Q06609 339 aa19.11■□□□□ 0.65
TRIM56-202ENST00000412507 MMRN1Q13201 1228 aa19.11■□□□□ 0.65
TRIM56-202ENST00000412507 MESDQ14696 234 aa19.11■□□□□ 0.65
TRIM56-202ENST00000412507 SETMARQ53H47 684 aaPredicted RBP19.11■□□□□ 0.65
TRIM56-202ENST00000412507 ZNF805Q5CZA5 627 aa19.11■□□□□ 0.65
TRIM56-202ENST00000412507 NAPEPLDQ6IQ20 393 aa19.11■□□□□ 0.65
TRIM56-202ENST00000412507 NEK5Q6P3R8 708 aa19.11■□□□□ 0.65
TRIM56-202ENST00000412507 TMCO3Q6UWJ1 677 aa19.11■□□□□ 0.65
TRIM56-202ENST00000412507 GDPD4Q6W3E5 623 aa19.11■□□□□ 0.65
TRIM56-202ENST00000412507 PIP4P1Q86T03 277 aa19.11■□□□□ 0.65
TRIM56-202ENST00000412507 LZTR1Q8N653 840 aa19.11■□□□□ 0.65
TRIM56-202ENST00000412507 MRFAP1L1Q96HT8 127 aa19.11■□□□□ 0.65
TRIM56-202ENST00000412507 ZFR2Q9UPR6 939 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms