RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 SLC7A4O43246 635 aa13.36□□□□□ -0.27
HDAC8-210ENST00000412342 PLRG1O43660 514 aaKnown RBP13.36□□□□□ -0.27
HDAC8-210ENST00000412342 IGSF6O95976 241 aa13.36□□□□□ -0.27
HDAC8-210ENST00000412342 IGHV4-34P06331 123 aa13.36□□□□□ -0.27
HDAC8-210ENST00000412342 CR2P20023 1033 aa13.36□□□□□ -0.27
HDAC8-210ENST00000412342 ITGB7P26010 798 aa13.36□□□□□ -0.27
HDAC8-210ENST00000412342 CTNNA2P26232 953 aa13.36□□□□□ -0.27
HDAC8-210ENST00000412342 GARSP41250 739 aaKnown RBP13.36□□□□□ -0.27
HDAC8-210ENST00000412342 PEX5P50542 639 aa13.36□□□□□ -0.27
HDAC8-210ENST00000412342 CREB5Q02930 508 aa13.36□□□□□ -0.27
HDAC8-210ENST00000412342 ADCY2Q08462 1091 aa13.36□□□□□ -0.27
HDAC8-210ENST00000412342 SPEM2Q0P670 501 aa13.36□□□□□ -0.27
HDAC8-210ENST00000412342 SFSWAPQ12872 951 aaKnown RBP13.36□□□□□ -0.27
HDAC8-210ENST00000412342 MYLK3Q32MK0 819 aa13.36□□□□□ -0.27
HDAC8-210ENST00000412342 ZFYVE27Q5T4F4 411 aa13.36□□□□□ -0.27
HDAC8-210ENST00000412342 TMCO4Q5TGY1 634 aa13.36□□□□□ -0.27
HDAC8-210ENST00000412342 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.36□□□□□ -0.27
HDAC8-210ENST00000412342 SPOCD1Q6ZMY3 1216 aa13.36□□□□□ -0.27
HDAC8-210ENST00000412342 ZNF662Q6ZS27 426 aa13.36□□□□□ -0.27
HDAC8-210ENST00000412342 CYP2U1Q7Z449 544 aa13.36□□□□□ -0.27
HDAC8-210ENST00000412342 LRRC49Q8IUZ0 686 aa13.36□□□□□ -0.27
HDAC8-210ENST00000412342 TXLNBQ8N3L3 684 aa13.36□□□□□ -0.27
HDAC8-210ENST00000412342 PGBD5Q8N414 524 aa13.36□□□□□ -0.27
HDAC8-210ENST00000412342 ATPAF2Q8N5M1 289 aa13.36□□□□□ -0.27
HDAC8-210ENST00000412342 TSEN2Q8NCE0 465 aaKnown RBP13.36□□□□□ -0.27
HDAC8-210ENST00000412342 C1orf216Q8TAB5 229 aa13.36□□□□□ -0.27
HDAC8-210ENST00000412342 KIAA1524Q8TCG1 905 aa13.36□□□□□ -0.27
HDAC8-210ENST00000412342 MAML1Q92585 1016 aa13.36□□□□□ -0.27
HDAC8-210ENST00000412342 FOXJ1Q92949 421 aa13.36□□□□□ -0.27
HDAC8-210ENST00000412342 FATE1Q969F0 183 aa13.36□□□□□ -0.27
HDAC8-210ENST00000412342 OLFM3Q96PB7 478 aa13.36□□□□□ -0.27
HDAC8-210ENST00000412342 TSGA13Q96PP4 275 aa13.36□□□□□ -0.27
HDAC8-210ENST00000412342 PSKH2Q96QS6 385 aa13.36□□□□□ -0.27
HDAC8-210ENST00000412342 OMDQ99983 421 aa13.36□□□□□ -0.27
HDAC8-210ENST00000412342 HDAC8Q9BY41 377 aa13.36□□□□□ -0.27
HDAC8-210ENST00000412342 SMOC1Q9H4F8 434 aa13.36□□□□□ -0.27
HDAC8-210ENST00000412342 SEMA4GQ9NTN9 838 aa13.36□□□□□ -0.27
HDAC8-210ENST00000412342 EVLQ9UI08 416 aaPredicted RBP13.36□□□□□ -0.27
HDAC8-210ENST00000412342 NCKAP1Q9Y2A7 1128 aa13.36□□□□□ -0.27
HDAC8-210ENST00000412342 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.36□□□□□ -0.27
HDAC8-210ENST00000412342 PCDHA3Q9Y5H8 950 aa13.36□□□□□ -0.27
HDAC8-210ENST00000412342 SLCO1B1Q9Y6L6 691 aa13.36□□□□□ -0.27
HDAC8-210ENST00000412342 DOCK9Q9BZ29 2069 aa13.36□□□□□ -0.27
HDAC8-210ENST00000412342 GON4LQ3T8J9 2241 aa13.36□□□□□ -0.27
HDAC8-210ENST00000412342 ATXN2Q99700 1313 aaKnown RBP13.36□□□□□ -0.27
HDAC8-210ENST00000412342 PI4KAP42356 2102 aa13.36□□□□□ -0.27
HDAC8-210ENST00000412342 hCG_1818297A0A087WSY0 165 aa13.35□□□□□ -0.27
HDAC8-210ENST00000412342 KRIT1O00522 736 aa13.35□□□□□ -0.27
HDAC8-210ENST00000412342 SPINT1O43278 529 aa13.35□□□□□ -0.27
HDAC8-210ENST00000412342 GJB3O75712 270 aa13.35□□□□□ -0.27
HDAC8-210ENST00000412342 PALMO75781 387 aa13.35□□□□□ -0.27
HDAC8-210ENST00000412342 POP4O95707 220 aaKnown RBP13.35□□□□□ -0.27
HDAC8-210ENST00000412342 ZNF806P0C7X5 589 aa13.35□□□□□ -0.27
HDAC8-210ENST00000412342 KRT10P13645 584 aa13.35□□□□□ -0.27
HDAC8-210ENST00000412342 CSNK1DP48730 415 aa13.35□□□□□ -0.27
HDAC8-210ENST00000412342 LBRQ14739 615 aaKnown RBP13.35□□□□□ -0.27
HDAC8-210ENST00000412342 CCDC6Q16204 474 aa13.35□□□□□ -0.27
HDAC8-210ENST00000412342 CSRP2Q16527 193 aa13.35□□□□□ -0.27
HDAC8-210ENST00000412342 DCAF12L1Q5VU92 463 aa13.35□□□□□ -0.27
HDAC8-210ENST00000412342 NCEH1Q6PIU2 408 aa13.35□□□□□ -0.27
HDAC8-210ENST00000412342 ERN2Q76MJ5 926 aaKnown RBP13.35□□□□□ -0.27
HDAC8-210ENST00000412342 PARS2Q7L3T8 475 aaKnown RBP13.35□□□□□ -0.27
HDAC8-210ENST00000412342 SYT12Q8IV01 421 aa13.35□□□□□ -0.27
HDAC8-210ENST00000412342 RYBPQ8N488 228 aaPredicted RBP13.35□□□□□ -0.27
HDAC8-210ENST00000412342 RNF10Q8N5U6 811 aaKnown RBP13.35□□□□□ -0.27
HDAC8-210ENST00000412342 TEX26Q8N6G2 289 aa13.35□□□□□ -0.27
HDAC8-210ENST00000412342 OR2T34Q8NGX1 318 aa13.35□□□□□ -0.27
HDAC8-210ENST00000412342 EXD1Q8NHP7 514 aa13.35□□□□□ -0.27
HDAC8-210ENST00000412342 GANCQ8TET4 914 aa13.35□□□□□ -0.27
HDAC8-210ENST00000412342 ALG3Q92685 438 aa13.35□□□□□ -0.27
HDAC8-210ENST00000412342 BIRC7Q96CA5 298 aa13.35□□□□□ -0.27
HDAC8-210ENST00000412342 HDAC11Q96DB2 347 aa13.35□□□□□ -0.27
HDAC8-210ENST00000412342 HERPUD2Q9BSE4 406 aa13.35□□□□□ -0.27
HDAC8-210ENST00000412342 CPEB1Q9BZB8 566 aaKnown RBP13.35□□□□□ -0.27
HDAC8-210ENST00000412342 EBF2Q9HAK2 575 aa13.35□□□□□ -0.27
HDAC8-210ENST00000412342 SEPT3Q9UH03 358 aa13.35□□□□□ -0.27
HDAC8-210ENST00000412342 TP53BP1Q12888 1972 aaPredicted RBP13.34□□□□□ -0.27
HDAC8-210ENST00000412342 CACNA1EQ15878 2313 aa13.34□□□□□ -0.27
HDAC8-210ENST00000412342 TSPAN11A1L157 253 aa13.34□□□□□ -0.27
HDAC8-210ENST00000412342 CCDC66A2RUB6 948 aa13.34□□□□□ -0.27
HDAC8-210ENST00000412342 PATE3B3GLJ2 98 aa13.34□□□□□ -0.27
HDAC8-210ENST00000412342 APOL1O14791 398 aa13.34□□□□□ -0.27
HDAC8-210ENST00000412342 LATO43561 262 aa13.34□□□□□ -0.27
HDAC8-210ENST00000412342 ZRANB2O95218 330 aaKnown RBP eCLIP13.34□□□□□ -0.27
HDAC8-210ENST00000412342 UGT2B4P06133 528 aa13.34□□□□□ -0.27
HDAC8-210ENST00000412342 MAOBP27338 520 aa13.34□□□□□ -0.27
HDAC8-210ENST00000412342 HOXD12P35452 270 aa13.34□□□□□ -0.27
HDAC8-210ENST00000412342 ABL2P42684 1182 aa13.34□□□□□ -0.27
HDAC8-210ENST00000412342 NAP1L1P55209 391 aaKnown RBP13.34□□□□□ -0.27
HDAC8-210ENST00000412342 PPP2CBP62714 309 aa13.34□□□□□ -0.27
HDAC8-210ENST00000412342 PPP2CAP67775 309 aa13.34□□□□□ -0.27
HDAC8-210ENST00000412342 PPIDQ08752 370 aaKnown RBP13.34□□□□□ -0.27
HDAC8-210ENST00000412342 NSUN2Q08J23 767 aaKnown RBP eCLIP13.34□□□□□ -0.27
HDAC8-210ENST00000412342 PPP2R5EQ16537 467 aa13.34□□□□□ -0.27
HDAC8-210ENST00000412342 IFI16Q16666 785 aaKnown RBP13.34□□□□□ -0.27
HDAC8-210ENST00000412342 ZNF805Q5CZA5 627 aa13.34□□□□□ -0.27
HDAC8-210ENST00000412342 KIAA0895LQ68EN5 471 aa13.34□□□□□ -0.27
HDAC8-210ENST00000412342 TCEAL6Q6IPX3 200 aa13.34□□□□□ -0.27
HDAC8-210ENST00000412342 NPNTQ6UXI9 565 aa13.34□□□□□ -0.27
HDAC8-210ENST00000412342 RCOR2Q8IZ40 523 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms