RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 ARF5P84085 180 aa11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 TFF2Q03403 129 aa11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 NIPAL4Q0D2K0 466 aa11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 LMAN2Q12907 356 aa11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 OLIG2Q13516 323 aa11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 SLC14A2Q15849 920 aa11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 AAK1Q2M2I8 961 aa11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 FSCBQ5H9T9 825 aa11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 SPANXN3Q5MJ09 141 aa11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 STEAP4Q687X5 459 aa11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 CES5AQ6NT32 575 aa11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 RETSATQ6NUM9 610 aa11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 KDELC1Q6UW63 502 aa11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 UNC5AQ6ZN44 842 aa11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 METTL3Q86U44 580 aaKnown RBP11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 IGDCC3Q8IVU1 814 aa11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 NPAS3Q8IXF0 933 aa11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 AGGF1Q8N302 714 aaeCLIP11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 MPP5Q8N3R9 675 aa11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 PGBD5Q8N414 524 aa11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 RIN3Q8TB24 985 aa11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 WFDC5Q8TCV5 224 aa11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 IRF7Q92985 503 aa11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 ACDQ96AP0 544 aa11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 IFT43Q96FT9 208 aa11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 PSKH2Q96QS6 385 aa11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 XPO6Q96QU8 1125 aaKnown RBP11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 CYTH2Q99418 400 aa11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 FEM1AQ9BSK4 669 aa11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 C1QTNF1Q9BXJ1 281 aa11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 IL22Q9GZX6 179 aa11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 SCUBE2Q9NQ36 999 aa11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 PIH1D1Q9NWS0 290 aaKnown RBP11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 PSMC3IPQ9P2W1 217 aaPredicted RBP11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 FETUBQ9UGM5 382 aa11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 VPS51Q9UID3 782 aa11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 RABGEF1Q9UJ41 708 aa11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 NOVA2Q9UNW9 492 aaKnown RBP11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 WNT6Q9Y6F9 365 aa11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 IKBKGQ9Y6K9 419 aa11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 DOCK8Q8NF50 2099 aa11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 KIAA1549LQ6ZVL6 1849 aa11.78□□□□□ -0.52
SNRNP35-202ENST00000412157 TCRBV9S1A1TA0A576 114 aa11.77□□□□□ -0.53
SNRNP35-202ENST00000412157 MAGEB16A2A368 324 aa11.77□□□□□ -0.53
SNRNP35-202ENST00000412157 LINC01565O15544 149 aa11.77□□□□□ -0.53
SNRNP35-202ENST00000412157 RRP9O43818 475 aaKnown RBP11.77□□□□□ -0.53
SNRNP35-202ENST00000412157 ATP9BO43861 1147 aa11.77□□□□□ -0.53
SNRNP35-202ENST00000412157 TMCC1O94876 653 aa11.77□□□□□ -0.53
SNRNP35-202ENST00000412157 PENKP01210 267 aaPredicted RBP11.77□□□□□ -0.53
SNRNP35-202ENST00000412157 MSH2P43246 934 aa11.77□□□□□ -0.53
SNRNP35-202ENST00000412157 CBX1P83916 185 aa11.77□□□□□ -0.53
SNRNP35-202ENST00000412157 SKOR1P84550 965 aa11.77□□□□□ -0.53
SNRNP35-202ENST00000412157 TMED2Q15363 201 aa11.77□□□□□ -0.53
SNRNP35-202ENST00000412157 PLEKHG6Q3KR16 790 aa11.77□□□□□ -0.53
SNRNP35-202ENST00000412157 INO80DQ53TQ3 878 aaPredicted RBP11.77□□□□□ -0.53
SNRNP35-202ENST00000412157 RNF43Q68DV7 783 aa11.77□□□□□ -0.53
SNRNP35-202ENST00000412157 ALG1LQ6GMV1 187 aa11.77□□□□□ -0.53
SNRNP35-202ENST00000412157 PRPF39Q86UA1 669 aaKnown RBP11.77□□□□□ -0.53
SNRNP35-202ENST00000412157 TMEM25Q86YD3 366 aa11.77□□□□□ -0.53
SNRNP35-202ENST00000412157 TDRPQ86YL5 185 aa11.77□□□□□ -0.53
SNRNP35-202ENST00000412157 ARFGAP2Q8N6H7 521 aa11.77□□□□□ -0.53
SNRNP35-202ENST00000412157 PPHLN1Q8NEY8 458 aaKnown RBP11.77□□□□□ -0.53
SNRNP35-202ENST00000412157 ARRDC2Q8TBH0 407 aa11.77□□□□□ -0.53
SNRNP35-202ENST00000412157 BPIFB1Q8TDL5 484 aa11.77□□□□□ -0.53
SNRNP35-202ENST00000412157 CDKL2Q92772 493 aa11.77□□□□□ -0.53
SNRNP35-202ENST00000412157 SMARCD2Q92925 531 aa11.77□□□□□ -0.53
SNRNP35-202ENST00000412157 ZNF669Q96BR6 464 aaPredicted RBP11.77□□□□□ -0.53
SNRNP35-202ENST00000412157 ALG14Q96F25 216 aa11.77□□□□□ -0.53
SNRNP35-202ENST00000412157 MRGPRX2Q96LB1 330 aa11.77□□□□□ -0.53
SNRNP35-202ENST00000412157 ASB16Q96NS5 453 aa11.77□□□□□ -0.53
SNRNP35-202ENST00000412157 DUS2Q9NX74 493 aaKnown RBP11.77□□□□□ -0.53
SNRNP35-202ENST00000412157 OBP2AQ9NY56 170 aa11.77□□□□□ -0.53
SNRNP35-202ENST00000412157 GDE1Q9NZC3 331 aa11.77□□□□□ -0.53
SNRNP35-202ENST00000412157 LMCD1Q9NZU5 365 aa11.77□□□□□ -0.53
SNRNP35-202ENST00000412157 MARK1Q9P0L2 795 aa11.77□□□□□ -0.53
SNRNP35-202ENST00000412157 LGALS13Q9UHV8 139 aa11.77□□□□□ -0.53
SNRNP35-202ENST00000412157 SLC25A13Q9UJS0 675 aa11.77□□□□□ -0.53
SNRNP35-202ENST00000412157 OR51B4Q9Y5P0 310 aa11.77□□□□□ -0.53
SNRNP35-202ENST00000412157 MUSKO15146 869 aa11.76□□□□□ -0.53
SNRNP35-202ENST00000412157 ZMPSTE24O75844 475 aa11.76□□□□□ -0.53
SNRNP35-202ENST00000412157 NFATC1O95644 943 aa11.76□□□□□ -0.53
SNRNP35-202ENST00000412157 ADH1CP00326 375 aa11.76□□□□□ -0.53
SNRNP35-202ENST00000412157 MMP2P08253 660 aa11.76□□□□□ -0.53
SNRNP35-202ENST00000412157 INHBAP08476 426 aa11.76□□□□□ -0.53
SNRNP35-202ENST00000412157 TYRP14679 529 aa11.76□□□□□ -0.53
SNRNP35-202ENST00000412157 HLA-DPA1P20036 260 aa11.76□□□□□ -0.53
SNRNP35-202ENST00000412157 NR1D1P20393 614 aa11.76□□□□□ -0.53
SNRNP35-202ENST00000412157 CA4P22748 312 aa11.76□□□□□ -0.53
SNRNP35-202ENST00000412157 CD70P32970 193 aa11.76□□□□□ -0.53
SNRNP35-202ENST00000412157 ADRA1AP35348 466 aa11.76□□□□□ -0.53
SNRNP35-202ENST00000412157 PLK1P53350 603 aa11.76□□□□□ -0.53
SNRNP35-202ENST00000412157 MAGOHP61326 146 aaKnown RBP11.76□□□□□ -0.53
SNRNP35-202ENST00000412157 RHOAP61586 193 aa11.76□□□□□ -0.53
SNRNP35-202ENST00000412157 CRADDP78560 199 aa11.76□□□□□ -0.53
SNRNP35-202ENST00000412157 NR1H3Q13133 447 aa11.76□□□□□ -0.53
SNRNP35-202ENST00000412157 ADAM15Q13444 863 aa11.76□□□□□ -0.53
SNRNP35-202ENST00000412157 DMC1Q14565 340 aa11.76□□□□□ -0.53
SNRNP35-202ENST00000412157 CRYMQ14894 314 aa11.76□□□□□ -0.53
SNRNP35-202ENST00000412157 EFTUD2Q15029 972 aaKnown RBP eCLIP11.76□□□□□ -0.53
SNRNP35-202ENST00000412157 RASA2Q15283 850 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms