RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 KRT2P35908 639 aa4.73□□□□□ -1.65
BRCA1-204ENST00000412061 TCF7P36402 384 aaPredicted RBP4.73□□□□□ -1.65
BRCA1-204ENST00000412061 GRIA3P42263 894 aa4.73□□□□□ -1.65
BRCA1-204ENST00000412061 HDAC4P56524 1084 aa4.73□□□□□ -1.65
BRCA1-204ENST00000412061 EVCP57679 992 aa4.73□□□□□ -1.65
BRCA1-204ENST00000412061 IL1RL1Q01638 556 aa4.73□□□□□ -1.65
BRCA1-204ENST00000412061 COASYQ13057 564 aa4.73□□□□□ -1.65
BRCA1-204ENST00000412061 DNASE1L3Q13609 305 aa4.73□□□□□ -1.65
BRCA1-204ENST00000412061 PCLAFQ15004 111 aa4.73□□□□□ -1.65
BRCA1-204ENST00000412061 SETMARQ53H47 684 aaPredicted RBP4.73□□□□□ -1.65
BRCA1-204ENST00000412061 KRBOX4Q5JUW0 171 aa4.73□□□□□ -1.65
BRCA1-204ENST00000412061 GKAP1Q5VSY0 366 aaPredicted RBP4.73□□□□□ -1.65
BRCA1-204ENST00000412061 TRAT1Q6PIZ9 186 aa4.73□□□□□ -1.65
BRCA1-204ENST00000412061 SARM1Q6SZW1 724 aa4.73□□□□□ -1.65
BRCA1-204ENST00000412061 RRM2BQ7LG56 351 aa4.73□□□□□ -1.65
BRCA1-204ENST00000412061 NUP54Q7Z3B4 507 aa4.73□□□□□ -1.65
BRCA1-204ENST00000412061 NLRP14Q86W24 1093 aa4.73□□□□□ -1.65
BRCA1-204ENST00000412061 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.73□□□□□ -1.65
BRCA1-204ENST00000412061 PNPLA1Q8N8W4 532 aa4.73□□□□□ -1.65
BRCA1-204ENST00000412061 GRK7Q8WTQ7 553 aa4.73□□□□□ -1.65
BRCA1-204ENST00000412061 EXOC4Q96A65 974 aa4.73□□□□□ -1.65
BRCA1-204ENST00000412061 FAR2Q96K12 515 aa4.73□□□□□ -1.65
BRCA1-204ENST00000412061 FER1L6-AS2Q96M78 137 aa4.73□□□□□ -1.65
BRCA1-204ENST00000412061 CLSTN3Q9BQT9 956 aa4.73□□□□□ -1.65
BRCA1-204ENST00000412061 FSD1Q9BTV5 496 aa4.73□□□□□ -1.65
BRCA1-204ENST00000412061 CINPQ9BW66 212 aaPredicted RBP4.73□□□□□ -1.65
BRCA1-204ENST00000412061 FSD1LQ9BXM9 530 aa4.73□□□□□ -1.65
BRCA1-204ENST00000412061 ST6GALNAC4Q9H4F1 302 aa4.73□□□□□ -1.65
BRCA1-204ENST00000412061 POLR1BQ9H9Y6 1135 aa4.73□□□□□ -1.65
BRCA1-204ENST00000412061 PFDN4Q9NQP4 134 aa4.73□□□□□ -1.65
BRCA1-204ENST00000412061 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.73□□□□□ -1.65
BRCA1-204ENST00000412061 THAP1Q9NVV9 213 aa4.73□□□□□ -1.65
BRCA1-204ENST00000412061 OSGIN2Q9Y236 505 aa4.73□□□□□ -1.65
BRCA1-204ENST00000412061 PTRH2Q9Y3E5 179 aaKnown RBP4.73□□□□□ -1.65
BRCA1-204ENST00000412061 MTF2Q9Y483 593 aaPredicted RBP4.73□□□□□ -1.65
BRCA1-204ENST00000412061 COL4A3Q01955 1670 aa4.73□□□□□ -1.65
BRCA1-204ENST00000412061 POLR2AP24928 1970 aaKnown RBP4.73□□□□□ -1.65
BRCA1-204ENST00000412061 GLOD5A6NK44 160 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 H0YIZ8 118 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 GRM8O00222 908 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 CA12O43570 354 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 KERAO60938 352 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 SLC22A3O75751 556 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 ZNF202O95125 648 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 RB1P06400 928 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 TUBBP07437 444 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 ADRB1P08588 477 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 SNRNP70P08621 437 aaKnown RBP4.72□□□□□ -1.65
BRCA1-204ENST00000412061 EBLN1P0CF75 366 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 LYL1P12980 280 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 MCM7P33993 719 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 CPOXP36551 454 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 IGHMBP2P38935 993 aaKnown RBP4.72□□□□□ -1.65
BRCA1-204ENST00000412061 MPLP40238 635 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 AMPHP49418 695 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 LIG4P49917 911 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 EEFSECP57772 596 aaKnown RBP4.72□□□□□ -1.65
BRCA1-204ENST00000412061 EFNB1P98172 346 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 YWHAHQ04917 246 aaPredicted RBP4.72□□□□□ -1.65
BRCA1-204ENST00000412061 DEUP1Q05D60 604 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 CBFBQ13951 182 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 SH2D4BQ5SQS7 431 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 GALNT17Q6IS24 598 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 UNC5DQ6UXZ4 953 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 MCM10Q7L590 875 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 SFTPA1Q8IWL2 248 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 CCAR2Q8N163 923 aaKnown RBP4.72□□□□□ -1.65
BRCA1-204ENST00000412061 C10orf53Q8N6V4 93 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 PLD5Q8N7P1 536 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 KIF18AQ8NI77 898 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 UTP15Q8TED0 518 aaKnown RBP4.72□□□□□ -1.65
BRCA1-204ENST00000412061 CLEC4CQ8WTT0 213 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 SLC9A6Q92581 669 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 TAF4BQ92750 862 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 SCPEP1Q9HB40 452 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 SPATS2LQ9NUQ6 558 aaKnown RBP4.72□□□□□ -1.65
BRCA1-204ENST00000412061 TBK1Q9UHD2 729 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 MKLN1Q9UL63 735 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 ADAMTS5Q9UNA0 930 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 CCDC187A0A096LP49 1063 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 TRAV34A0A0B4J273 112 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 CCDC69A6NI79 296 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 LINC00473A8K010 186 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 PER2O15055 1255 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 LDLRAD4O15165 306 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 WDR46O15213 610 aaKnown RBP4.72□□□□□ -1.65
BRCA1-204ENST00000412061 NKX2-8O15522 239 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 NARSO43776 548 aaKnown RBP4.72□□□□□ -1.65
BRCA1-204ENST00000412061 TMIGD3P0DMS9 266 aaPredicted RBP4.72□□□□□ -1.65
BRCA1-204ENST00000412061 P4HA1P13674 534 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 PTAFRP25105 342 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 ADRA1BP35368 520 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 HNF1BP35680 557 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 SLC15A1P46059 708 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 DIO1P49895 249 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 CCT8P50990 548 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 PSG6Q00889 435 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 CEBPZQ03701 1054 aaKnown RBP4.72□□□□□ -1.65
BRCA1-204ENST00000412061 CDK18Q07002 472 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 ACTN3Q08043 901 aaPredicted RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms