RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 A0A0G2JN53 185 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 A0A0U1RQG5 324 aaPredicted RBP-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 C1orf226A1L170 272 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 A6NL46 340 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 A8MUU9 505 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 BLOC1S5-TXNDC5H3BN57 136 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 NUPL2O15504 423 aaKnown RBP-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 TIMM44O43615 452 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 TRIAP1O43715 76 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 CEP104O60308 925 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 TJP3O95049 919 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 REC8O95072 547 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 IGLV2-8P01709 118 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 LCATP04180 440 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 MELTFP08582 738 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 CPEP16870 476 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 KRT15P19012 456 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 CD22P20273 847 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 GARTP22102 1010 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 ENPP1P22413 925 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 MCM4P33991 863 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 LIPAP38571 399 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 GZMMP51124 257 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 EMP2P54851 167 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 MT1HP80294 61 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 MS4A2Q01362 244 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 SLC7A5Q01650 507 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 PLCXD2Q0VAA5 305 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 TRAF3Q13114 568 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 PABPC4Q13310 644 aaKnown RBP eCLIP-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 LPIN1Q14693 890 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 MYBPC3Q14896 1274 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 SEPT7Q16181 437 aaKnown RBP-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 TAZQ16635 292 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 ZNF789Q5FWF6 425 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 TTC39AQ5SRH9 613 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 FNBP1LQ5T0N5 605 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 OTUD1Q5VV17 481 aaPredicted RBP-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 KCTD11Q693B1 232 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 CCDC144NLQ6NUI1 221 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 MTHFD1LQ6UB35 978 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 RANBP10Q6VN20 620 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 RNF44Q7L0R7 432 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 C11orf96Q7Z7L8 435 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 HMGN2P46Q86SG4 172 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 OSTM1Q86WC4 334 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 KMT5CQ86Y97 462 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 ZC3H3Q8IXZ2 948 aaKnown RBP-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 MKXQ8IYA7 352 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 FAM9AQ8IZU1 332 aaPredicted RBP-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 FITM2Q8N6M3 262 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 KIR3DL3Q8N743 410 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 ZNF645Q8N7E2 425 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 C7orf31Q8N865 590 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 FAM169BQ8N8A8 192 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 ZNF491Q8N8L2 437 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 NSUN7Q8NE18 718 aaKnown RBP-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 GRHL3Q8TE85 626 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 TMEM174Q8WUU8 243 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 TMEM171Q8WVE6 324 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 IGSF8Q969P0 613 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 TMEM159Q96B96 161 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 TRMT61AQ96FX7 289 aaKnown RBP-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 ZNF514Q96K75 400 aaPredicted RBP-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 TMEM74Q96NL1 305 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 CDRT15Q96T59 188 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 KIR2DL4Q99706 377 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 SOSTQ9BQB4 213 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 FAM126AQ9BYI3 521 aaPredicted RBP-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 MRPL46Q9H2W6 279 aaKnown RBP-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 TP63Q9H3D4 680 aaPredicted RBP-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 PIF1Q9H611 641 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 KRCC1Q9NPI7 259 aaPredicted RBP-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 FBXO34Q9NWN3 711 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 TBC1D29Q9UFV1 150 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 PHF11Q9UIL8 331 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 ARHGAP26Q9UNA1 814 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 LRP4O75096 1905 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 KDM2BQ8NHM5 1336 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 TRIOO75962 3097 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 BAZ2BQ9UIF8 2168 aaKnown RBP-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 ZSCAN5BA6NJL1 495 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 FAM227AF5H4B4 570 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 DVL1O14640 695 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 KCNK3O14649 394 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 SIVA1O15304 175 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 INPPL1O15357 1258 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 KIF5CO60282 957 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 KCNJ13O60928 360 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 CA11O75493 328 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 CCNKO75909 580 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 KIF20AO95235 890 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 BRD1O95696 1058 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 IFNA2P01563 188 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 SRCP12931 536 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 NAGAP17050 411 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 CDH3P22223 829 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 CHRNB4P30926 498 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 HOXC8P31273 242 aa-1.46□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms