RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 FICDQ9BVA6 458 aa13.75□□□□□ -0.21
LIMS1-205ENST00000410093 MMADHCQ9H3L0 296 aaPredicted RBP13.75□□□□□ -0.21
LIMS1-205ENST00000410093 NOL6Q9H6R4 1146 aaKnown RBP13.75□□□□□ -0.21
LIMS1-205ENST00000410093 IARS2Q9NSE4 1012 aaKnown RBP13.75□□□□□ -0.21
LIMS1-205ENST00000410093 PIH1D1Q9NWS0 290 aaKnown RBP13.75□□□□□ -0.21
LIMS1-205ENST00000410093 MTRRQ9UBK8 725 aa13.75□□□□□ -0.21
LIMS1-205ENST00000410093 STK39Q9UEW8 545 aa13.75□□□□□ -0.21
LIMS1-205ENST00000410093 DNMT3LQ9UJW3 386 aa13.75□□□□□ -0.21
LIMS1-205ENST00000410093 RIMKLBQ9ULI2 386 aa13.75□□□□□ -0.21
LIMS1-205ENST00000410093 APOBEC2Q9Y235 224 aaKnown RBP13.75□□□□□ -0.21
LIMS1-205ENST00000410093 CDY1Q9Y6F8 540 aa13.75□□□□□ -0.21
LIMS1-205ENST00000410093 CHD5Q8TDI0 1954 aa13.75□□□□□ -0.21
LIMS1-205ENST00000410093 MICAL3Q7RTP6 2002 aa13.75□□□□□ -0.21
LIMS1-205ENST00000410093 A0A087X1B8 175 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 SLC12A8A0AV02 714 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 SLC38A8A6NNN8 435 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 F5H5T6 163 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 EFEMP2O95967 443 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 PEX11BO96011 259 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 SERPINA6P08185 405 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 RALBP11234 206 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 FGF3P11487 239 aaPredicted RBP13.74□□□□□ -0.21
LIMS1-205ENST00000410093 ALOX15P16050 662 aaPredicted RBP13.74□□□□□ -0.21
LIMS1-205ENST00000410093 NMBRP28336 390 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 RFC2P35250 354 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 ATP5C1P36542 298 aaKnown RBP13.74□□□□□ -0.21
LIMS1-205ENST00000410093 SLC11A2P49281 568 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 PGFP49763 221 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 SERPINH1P50454 418 aaKnown RBP13.74□□□□□ -0.21
LIMS1-205ENST00000410093 MNAT1P51948 309 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 KCNJ2P63252 427 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 RFTN1Q14699 578 aaPredicted RBP13.74□□□□□ -0.21
LIMS1-205ENST00000410093 PCLAFQ15004 111 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 POLD3Q15054 466 aaPredicted RBP13.74□□□□□ -0.21
LIMS1-205ENST00000410093 WASHC2DQ5SRD0 308 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 FAM109BQ6ICB4 259 aaPredicted RBP13.74□□□□□ -0.21
LIMS1-205ENST00000410093 KDELC1Q6UW63 502 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 CES3Q6UWW8 571 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 ARHGAP36Q6ZRI8 547 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 Q7L0L9 218 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 ARID3BQ8IVW6 561 aaPredicted RBP13.74□□□□□ -0.21
LIMS1-205ENST00000410093 KIRREL3Q8IZU9 778 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 OR6Y1Q8NGX8 325 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 USP33Q8TEY7 942 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 TADA1Q96BN2 335 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 PLD4Q96BZ4 506 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 PGLYRP2Q96PD5 576 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 SEPT5Q99719 369 aaPredicted RBP13.74□□□□□ -0.21
LIMS1-205ENST00000410093 DDX50Q9BQ39 737 aaKnown RBP13.74□□□□□ -0.21
LIMS1-205ENST00000410093 MAGEH1Q9H213 219 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 NMRAL1Q9HBL8 299 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 TRPC7Q9HCX4 862 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 TREX1Q9NSU2 369 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 DNAJC28Q9NX36 388 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 MPP6Q9NZW5 540 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 MAGED2Q9UNF1 606 aaPredicted RBP13.74□□□□□ -0.21
LIMS1-205ENST00000410093 TBKBP1A7MCY6 615 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 SLCO1B7G3V0H7 640 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 TLR5O60602 858 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 KLHL2O95198 593 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 LMNAP02545 664 aaKnown RBP13.74□□□□□ -0.21
LIMS1-205ENST00000410093 C2P06681 752 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 T-ENOLP0DO92 83 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 TARSP26639 723 aaKnown RBP13.74□□□□□ -0.21
LIMS1-205ENST00000410093 SERPINB3P29508 390 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 SERPINB5P36952 375 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 ARCN1P48444 511 aaKnown RBP13.74□□□□□ -0.21
LIMS1-205ENST00000410093 GPR15P49685 360 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 WNT3AP56704 352 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 ABCE1P61221 599 aaKnown RBP13.74□□□□□ -0.21
LIMS1-205ENST00000410093 POU4F1Q01851 419 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 SERINC3Q13530 473 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 PSMD5Q16401 504 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 RABGAP1LQ5R372 815 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 TMEM240Q5SV17 173 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 SWT1Q5T5J6 900 aaKnown RBP13.74□□□□□ -0.21
LIMS1-205ENST00000410093 FBXL22Q6P050 247 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 RNF19BQ6ZMZ0 732 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 GPR65Q8IYL9 337 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 C2CD4AQ8NCU7 369 aaPredicted RBP13.74□□□□□ -0.21
LIMS1-205ENST00000410093 FBXO22Q8NEZ5 403 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 SPATA22Q8NHS9 363 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 TSPAN17Q96FV3 270 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 THOC1Q96FV9 657 aaKnown RBP13.74□□□□□ -0.21
LIMS1-205ENST00000410093 RPRD1AQ96P16 312 aaPredicted RBP13.74□□□□□ -0.21
LIMS1-205ENST00000410093 AGAP2Q99490 1192 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 BTBD10Q9BSF8 475 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 TACO1Q9BSH4 297 aaKnown RBP13.74□□□□□ -0.21
LIMS1-205ENST00000410093 MECRQ9BV79 373 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 POLR1EQ9GZS1 481 aaKnown RBP13.74□□□□□ -0.21
LIMS1-205ENST00000410093 NOD2Q9HC29 1040 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 MRGBPQ9NV56 204 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 UBP1Q9NZI7 540 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 TMEM216Q9P0N5 145 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 ZNF212Q9UDV6 495 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 AFF4Q9UHB7 1163 aaKnown RBP13.74□□□□□ -0.21
LIMS1-205ENST00000410093 HAO1Q9UJM8 370 aa13.74□□□□□ -0.21
LIMS1-205ENST00000410093 CORO1CQ9ULV4 474 aaPredicted RBP13.74□□□□□ -0.21
LIMS1-205ENST00000410093 SLC7A4O43246 635 aa13.73□□□□□ -0.21
LIMS1-205ENST00000410093 TRIM13O60858 407 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms