RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 GALNT17Q6IS24 598 aa5.11□□□□□ -1.59
LSM5-205ENST00000409952 ZNF585AQ6P3V2 769 aa5.11□□□□□ -1.59
LSM5-205ENST00000409952 FOXR2Q6PJQ5 311 aa5.11□□□□□ -1.59
LSM5-205ENST00000409952 TSSK4Q6SA08 328 aa5.11□□□□□ -1.59
LSM5-205ENST00000409952 GLDNQ6ZMI3 551 aaPredicted RBP5.11□□□□□ -1.59
LSM5-205ENST00000409952 RBPMS2Q6ZRY4 209 aaKnown RBP5.11□□□□□ -1.59
LSM5-205ENST00000409952 MICALCLQ6ZW33 695 aa5.11□□□□□ -1.59
LSM5-205ENST00000409952 OTOAQ7RTW8 1153 aa5.11□□□□□ -1.59
LSM5-205ENST00000409952 TADA2BQ86TJ2 420 aa5.11□□□□□ -1.59
LSM5-205ENST00000409952 SYT12Q8IV01 421 aa5.11□□□□□ -1.59
LSM5-205ENST00000409952 TUSC5Q8IXB3 177 aa5.11□□□□□ -1.59
LSM5-205ENST00000409952 FAM185AQ8N0U4 392 aa5.11□□□□□ -1.59
LSM5-205ENST00000409952 CPXM2Q8N436 756 aa5.11□□□□□ -1.59
LSM5-205ENST00000409952 DPP10Q8N608 796 aa5.11□□□□□ -1.59
LSM5-205ENST00000409952 Q8NA96 180 aa5.11□□□□□ -1.59
LSM5-205ENST00000409952 XXYLT1Q8NBI6 393 aa5.11□□□□□ -1.59
LSM5-205ENST00000409952 SNX19Q92543 992 aa5.11□□□□□ -1.59
LSM5-205ENST00000409952 ZNF622Q969S3 477 aaKnown RBP eCLIP5.11□□□□□ -1.599e-7■□□□□ 9.3
LSM5-205ENST00000409952 FAM136AQ96C01 138 aa5.11□□□□□ -1.59
LSM5-205ENST00000409952 RSPRY1Q96DX4 576 aa5.11□□□□□ -1.59
LSM5-205ENST00000409952 MMABQ96EY8 250 aaPredicted RBP5.11□□□□□ -1.59
LSM5-205ENST00000409952 AK8Q96MA6 479 aa5.11□□□□□ -1.59
LSM5-205ENST00000409952 TMEM237Q96Q45 408 aa5.11□□□□□ -1.59
LSM5-205ENST00000409952 PAFAH2Q99487 392 aa5.11□□□□□ -1.59
LSM5-205ENST00000409952 AGAP2Q99490 1192 aa5.11□□□□□ -1.59
LSM5-205ENST00000409952 NEU1Q99519 415 aa5.11□□□□□ -1.59
LSM5-205ENST00000409952 SYT17Q9BSW7 474 aa5.11□□□□□ -1.59
LSM5-205ENST00000409952 SLC25A23Q9BV35 468 aa5.11□□□□□ -1.59
LSM5-205ENST00000409952 TRIM31Q9BZY9 425 aa5.11□□□□□ -1.59
LSM5-205ENST00000409952 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.11□□□□□ -1.59
LSM5-205ENST00000409952 TNMDQ9H2S6 317 aa5.11□□□□□ -1.59
LSM5-205ENST00000409952 SIRT3Q9NTG7 399 aaPredicted RBP5.11□□□□□ -1.59
LSM5-205ENST00000409952 KIAA1456Q9P272 454 aa5.11□□□□□ -1.59
LSM5-205ENST00000409952 LRIT1Q9P2V4 623 aa5.11□□□□□ -1.59
LSM5-205ENST00000409952 XPO7Q9UIA9 1087 aaKnown RBP5.11□□□□□ -1.59
LSM5-205ENST00000409952 HAO1Q9UJM8 370 aa5.11□□□□□ -1.59
LSM5-205ENST00000409952 A4GNTQ9UNA3 340 aa5.11□□□□□ -1.59
LSM5-205ENST00000409952 COG5Q9UP83 839 aa5.11□□□□□ -1.59
LSM5-205ENST00000409952 A0A1B0GTW7 788 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 FAM90A8PA6NJQ4 464 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 SNAP23O00161 211 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 CAPN9O14815 690 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 PRPF4O43172 522 aaKnown RBP eCLIP5.1□□□□□ -1.59
LSM5-205ENST00000409952 HS6ST1O60243 411 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 DIAPH2O60879 1101 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 PPFIA2O75334 1257 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 SEC22BO75396 215 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 IPO13O94829 963 aaKnown RBP5.1□□□□□ -1.59
LSM5-205ENST00000409952 CAMTA2O94983 1202 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 KAT7O95251 611 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 FAM90A13PP0C7W8 464 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 FAM90A24PP0C7X0 464 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 PCP11498 1178 aaKnown RBP5.1□□□□□ -1.59
LSM5-205ENST00000409952 INSRRP14616 1297 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 ERCC2P18074 760 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 MAPK3P27361 379 aaPredicted RBP5.1□□□□□ -1.59
LSM5-205ENST00000409952 EFNA5P52803 228 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 PNLIPRP2P54317 469 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 CSE1LP55060 971 aaKnown RBP5.1□□□□□ -1.59
LSM5-205ENST00000409952 RPS7P62081 194 aaKnown RBP5.1□□□□□ -1.59
LSM5-205ENST00000409952 HSD11B2P80365 405 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 SP2Q02086 613 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 KRTAP1-1Q07627 177 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 GRAPQ13588 217 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 SEMA3AQ14563 771 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 IL11RAQ14626 422 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 TNIP1Q15025 636 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 TAF7Q15545 349 aaPredicted RBP5.1□□□□□ -1.59
LSM5-205ENST00000409952 HYAL4Q2M3T9 481 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 ZSCAN23Q3MJ62 389 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 HS1BP3Q53T59 392 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 NHSL2Q5HYW2 709 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 GLRA4Q5JXX5 417 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 FAM102AQ5T9C2 384 aaPredicted RBP5.1□□□□□ -1.59
LSM5-205ENST00000409952 KRT79Q5XKE5 535 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 METRNLQ641Q3 311 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 AATKQ6ZMQ8 1374 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 MSANTD1Q6ZTZ1 278 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 MCM10Q7L590 875 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 CAND1Q86VP6 1230 aaKnown RBP5.1□□□□□ -1.59
LSM5-205ENST00000409952 VPS52Q8N1B4 723 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 ZNF808Q8N4W9 903 aaPredicted RBP5.1□□□□□ -1.59
LSM5-205ENST00000409952 IGSF1Q8N6C5 1336 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 OR56A1Q8NGH5 318 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 KCNE4Q8WWG9 221 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 SOCS4Q8WXH5 440 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 DACH2Q96NX9 599 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 ELOVL1Q9BW60 279 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 HDHD5Q9BXW7 423 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 FAM129AQ9BZQ8 928 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 ZNF644Q9H582 1327 aaPredicted RBP5.1□□□□□ -1.59
LSM5-205ENST00000409952 THAP9Q9H5L6 903 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 SAP30LQ9HAJ7 183 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 NRIP3Q9NQ35 241 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 ARHGEF38Q9NXL2 777 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 PSD3Q9NYI0 1048 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 TBK1Q9UHD2 729 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 SLC25A13Q9UJS0 675 aa5.1□□□□□ -1.59
LSM5-205ENST00000409952 MYADML2A6NDP7 307 aa5.09□□□□□ -1.59
LSM5-205ENST00000409952 A6NL46 340 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms