RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 REXO2Q9Y3B8 237 aaKnown RBP11.08□□□□□ -0.64
CHMP3-205ENST00000409810 MFHAS1Q9Y4C4 1052 aa11.08□□□□□ -0.64
CHMP3-205ENST00000409810 HYOU1Q9Y4L1 999 aa11.08□□□□□ -0.64
CHMP3-205ENST00000409810 WASF2Q9Y6W5 498 aa11.08□□□□□ -0.64
CHMP3-205ENST00000409810 DOCK9Q9BZ29 2069 aa11.07□□□□□ -0.64
CHMP3-205ENST00000409810 TP53BP1Q12888 1972 aaPredicted RBP11.07□□□□□ -0.64
CHMP3-205ENST00000409810 RCCD1A6NED2 376 aa11.07□□□□□ -0.64
CHMP3-205ENST00000409810 FAM47DPA6NHR8 397 aa11.07□□□□□ -0.64
CHMP3-205ENST00000409810 PRR5-ARHGAP8B1AHC4 643 aa11.07□□□□□ -0.64
CHMP3-205ENST00000409810 KRIT1O00522 736 aa11.07□□□□□ -0.64
CHMP3-205ENST00000409810 APOL1O14791 398 aa11.07□□□□□ -0.64
CHMP3-205ENST00000409810 KHNYNO15037 678 aaKnown RBP11.07□□□□□ -0.64
CHMP3-205ENST00000409810 PLRG1O43660 514 aaKnown RBP11.07□□□□□ -0.64
CHMP3-205ENST00000409810 ITGB7P26010 798 aa11.07□□□□□ -0.64
CHMP3-205ENST00000409810 MAPK8P45983 427 aa11.07□□□□□ -0.64
CHMP3-205ENST00000409810 NEK3P51956 506 aa11.07□□□□□ -0.64
CHMP3-205ENST00000409810 ZNF235Q14590 738 aa11.07□□□□□ -0.64
CHMP3-205ENST00000409810 LBRQ14739 615 aaKnown RBP11.07□□□□□ -0.64
CHMP3-205ENST00000409810 MYLK3Q32MK0 819 aa11.07□□□□□ -0.64
CHMP3-205ENST00000409810 POM121L1PQ3SYA9 428 aa11.07□□□□□ -0.64
CHMP3-205ENST00000409810 AGBL4Q5VU57 503 aa11.07□□□□□ -0.64
CHMP3-205ENST00000409810 PEAR1Q5VY43 1037 aaPredicted RBP11.07□□□□□ -0.64
CHMP3-205ENST00000409810 KIAA0895LQ68EN5 471 aa11.07□□□□□ -0.64
CHMP3-205ENST00000409810 NCEH1Q6PIU2 408 aa11.07□□□□□ -0.64
CHMP3-205ENST00000409810 ARHGAP36Q6ZRI8 547 aa11.07□□□□□ -0.64
CHMP3-205ENST00000409810 PRR23CQ6ZRP0 262 aa11.07□□□□□ -0.64
CHMP3-205ENST00000409810 ERN2Q76MJ5 926 aaKnown RBP11.07□□□□□ -0.64
CHMP3-205ENST00000409810 RFX6Q8HWS3 928 aa11.07□□□□□ -0.64
CHMP3-205ENST00000409810 LRRC8AQ8IWT6 810 aa11.07□□□□□ -0.64
CHMP3-205ENST00000409810 KIAA2013Q8IYS2 634 aa11.07□□□□□ -0.64
CHMP3-205ENST00000409810 PCDH19Q8TAB3 1148 aa11.07□□□□□ -0.64
CHMP3-205ENST00000409810 DNASE2BQ8WZ79 361 aa11.07□□□□□ -0.64
CHMP3-205ENST00000409810 FAM131CQ96AQ9 280 aa11.07□□□□□ -0.64
CHMP3-205ENST00000409810 RBM41Q96IZ5 413 aaKnown RBP11.07□□□□□ -0.64
CHMP3-205ENST00000409810 DESI2Q9BSY9 194 aa11.07□□□□□ -0.64
CHMP3-205ENST00000409810 NUSAP1Q9BXS6 441 aaKnown RBP11.07□□□□□ -0.64
CHMP3-205ENST00000409810 HDAC8Q9BY41 377 aa11.07□□□□□ -0.64
CHMP3-205ENST00000409810 C6orf106Q9H6K1 298 aaPredicted RBP11.07□□□□□ -0.64
CHMP3-205ENST00000409810 PREBQ9HCU5 417 aa11.07□□□□□ -0.64
CHMP3-205ENST00000409810 LHX3Q9UBR4 397 aa11.07□□□□□ -0.64
CHMP3-205ENST00000409810 EVLQ9UI08 416 aaPredicted RBP11.07□□□□□ -0.64
CHMP3-205ENST00000409810 ATXN2Q99700 1313 aaKnown RBP11.07□□□□□ -0.64
CHMP3-205ENST00000409810 PLXNA2O75051 1894 aa11.06□□□□□ -0.64
CHMP3-205ENST00000409810 CFAP54Q96N23 3096 aa11.06□□□□□ -0.64
CHMP3-205ENST00000409810 ADAMTS9Q9P2N4 1935 aa11.06□□□□□ -0.64
CHMP3-205ENST00000409810 MACROD2A1Z1Q3 448 aa11.06□□□□□ -0.64
CHMP3-205ENST00000409810 KRT86O43790 486 aa11.06□□□□□ -0.64
CHMP3-205ENST00000409810 NEBLO76041 1014 aa11.06□□□□□ -0.64
CHMP3-205ENST00000409810 FSBPO95073 299 aa11.06□□□□□ -0.64
CHMP3-205ENST00000409810 UGT2B4P06133 528 aa11.06□□□□□ -0.64
CHMP3-205ENST00000409810 NUDT1P36639 197 aa11.06□□□□□ -0.64
CHMP3-205ENST00000409810 CETN2P41208 172 aa11.06□□□□□ -0.64
CHMP3-205ENST00000409810 GARSP41250 739 aaKnown RBP11.06□□□□□ -0.64
CHMP3-205ENST00000409810 CSNK1DP48730 415 aa11.06□□□□□ -0.64
CHMP3-205ENST00000409810 CCR5P51681 352 aa11.06□□□□□ -0.64
CHMP3-205ENST00000409810 ARHGAP8P85298 464 aa11.06□□□□□ -0.64
CHMP3-205ENST00000409810 GALNT2Q10471 571 aa11.06□□□□□ -0.64
CHMP3-205ENST00000409810 CNTN1Q12860 1018 aa11.06□□□□□ -0.64
CHMP3-205ENST00000409810 TFDP2Q14188 446 aa11.06□□□□□ -0.64
CHMP3-205ENST00000409810 CYTH1Q15438 398 aa11.06□□□□□ -0.64
CHMP3-205ENST00000409810 AASDHQ4L235 1098 aaPredicted RBP11.06□□□□□ -0.64
CHMP3-205ENST00000409810 ZNF805Q5CZA5 627 aa11.06□□□□□ -0.64
CHMP3-205ENST00000409810 TRIM61Q5EBN2 209 aa11.06□□□□□ -0.64
CHMP3-205ENST00000409810 CFAP58Q5T655 872 aa11.06□□□□□ -0.64
CHMP3-205ENST00000409810 ATXN7L2Q5T6C5 722 aaPredicted RBP11.06□□□□□ -0.64
CHMP3-205ENST00000409810 PIP5KL1Q5T9C9 394 aa11.06□□□□□ -0.64
CHMP3-205ENST00000409810 SLC9A4Q6AI14 798 aa11.06□□□□□ -0.64
CHMP3-205ENST00000409810 FBXL19Q6PCT2 694 aa11.06□□□□□ -0.64
CHMP3-205ENST00000409810 BZW1Q7L1Q6 419 aaKnown RBP11.06□□□□□ -0.64
CHMP3-205ENST00000409810 ZSCAN30Q86W11 494 aa11.06□□□□□ -0.64
CHMP3-205ENST00000409810 CCDC50Q8IVM0 306 aa11.06□□□□□ -0.64
CHMP3-205ENST00000409810 KATNAL2Q8IYT4 538 aa11.06□□□□□ -0.64
CHMP3-205ENST00000409810 RCOR2Q8IZ40 523 aa11.06□□□□□ -0.64
CHMP3-205ENST00000409810 PQLC3Q8N755 202 aa11.06□□□□□ -0.64
CHMP3-205ENST00000409810 NETO2Q8NC67 525 aa11.06□□□□□ -0.64
CHMP3-205ENST00000409810 OR6K2Q8NGY2 324 aa11.06□□□□□ -0.64
CHMP3-205ENST00000409810 KIAA1524Q8TCG1 905 aa11.06□□□□□ -0.64
CHMP3-205ENST00000409810 RAB7BQ96AH8 199 aa11.06□□□□□ -0.64
CHMP3-205ENST00000409810 ARRDC3Q96B67 414 aa11.06□□□□□ -0.64
CHMP3-205ENST00000409810 RNF25Q96BH1 459 aaPredicted RBP11.06□□□□□ -0.64
CHMP3-205ENST00000409810 HDAC11Q96DB2 347 aa11.06□□□□□ -0.64
CHMP3-205ENST00000409810 TUBGCP5Q96RT8 1024 aa11.06□□□□□ -0.64
CHMP3-205ENST00000409810 CPEB1Q9BZB8 566 aaKnown RBP11.06□□□□□ -0.64
CHMP3-205ENST00000409810 LACRTQ9GZZ8 138 aa11.06□□□□□ -0.64
CHMP3-205ENST00000409810 MIR1-1HGQ9H1L0 117 aa11.06□□□□□ -0.64
CHMP3-205ENST00000409810 GOLPH3Q9H4A6 298 aa11.06□□□□□ -0.64
CHMP3-205ENST00000409810 PARD6AQ9NPB6 346 aa11.06□□□□□ -0.64
CHMP3-205ENST00000409810 SALL4Q9UJQ4 1053 aa11.06□□□□□ -0.64
CHMP3-205ENST00000409810 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.06□□□□□ -0.64
CHMP3-205ENST00000409810 ZNF292O60281 2723 aa11.05□□□□□ -0.64
CHMP3-205ENST00000409810 TBC1D3DA0A087WVF3 549 aa11.05□□□□□ -0.64
CHMP3-205ENST00000409810 TBC1D3IA0A087WXS9 549 aa11.05□□□□□ -0.64
CHMP3-205ENST00000409810 TBC1D3EA0A087X179 549 aa11.05□□□□□ -0.64
CHMP3-205ENST00000409810 TBC1D3KA0A087X1G2 549 aa11.05□□□□□ -0.64
CHMP3-205ENST00000409810 A0A1B0GTW7 788 aa11.05□□□□□ -0.64
CHMP3-205ENST00000409810 CCDC66A2RUB6 948 aa11.05□□□□□ -0.64
CHMP3-205ENST00000409810 TBC1D3FA6NER0 549 aaPredicted RBP11.05□□□□□ -0.64
CHMP3-205ENST00000409810 C3orf70A6NLC5 250 aaPredicted RBP11.05□□□□□ -0.64
CHMP3-205ENST00000409810 TBC1D3LB9A6J9 549 aa11.05□□□□□ -0.64
CHMP3-205ENST00000409810 PLK4O00444 970 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms