RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 HPSEQ9Y251 543 aa6.58□□□□□ -1.36
LSM5-203ENST00000409782 ZDHHC9Q9Y397 364 aa6.58□□□□□ -1.36
LSM5-203ENST00000409782 COL4A4P53420 1690 aaPredicted RBP6.58□□□□□ -1.36
LSM5-203ENST00000409782 CDH23Q9H251 3354 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 MYH9P35579 1960 aaKnown RBP6.57□□□□□ -1.36
LSM5-203ENST00000409782 DCLK1O15075 740 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 MAGEB2O15479 319 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 CHMP2AO43633 222 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 SLC37A4O43826 429 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 JAK2O60674 1132 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 PSMD10O75832 226 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 C22orf31O95567 290 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 CHRNA1P02708 482 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 FDPSP14324 419 aaKnown RBP6.57□□□□□ -1.36
LSM5-203ENST00000409782 MYOGP15173 224 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 MGAT1P26572 445 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 RAP2BP61225 183 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 PRKCEQ02156 737 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 TAP1Q03518 808 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 GPS1Q13098 491 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 TRIM29Q14134 588 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 LPIN1Q14693 890 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 RABEP1Q15276 862 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 LETM2Q2VYF4 491 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 AGAP9Q5VTM2 703 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 ANKS6Q68DC2 871 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 ITPRIPL1Q6GPH6 555 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 PDXDC1Q6P996 788 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 PIK3AP1Q6ZUJ8 805 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 MYOCDQ8IZQ8 938 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 MBD3L2Q8NHZ7 208 aaPredicted RBP6.57□□□□□ -1.36
LSM5-203ENST00000409782 DNAJB3Q8WWF6 145 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 CPT1BQ92523 772 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 HVCN1Q96D96 273 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 FAM20AQ96MK3 541 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 RAD9AQ99638 391 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 LLPHQ9BRT6 129 aaKnown RBP6.57□□□□□ -1.36
LSM5-203ENST00000409782 TTPALQ9BTX7 342 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 FTHL17Q9BXU8 183 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 IMPG2Q9BZV3 1241 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 TRIM5Q9C035 493 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 UPF2Q9HAU5 1272 aaKnown RBP6.57□□□□□ -1.36
LSM5-203ENST00000409782 SMYD2Q9NRG4 433 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 TMLHEQ9NVH6 421 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 AASSQ9UDR5 926 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 VPS51Q9UID3 782 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 DERAQ9Y315 318 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 NR2E1Q9Y466 385 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 INSL6Q9Y581 213 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 NCOR1O75376 2440 aa6.57□□□□□ -1.36
LSM5-203ENST00000409782 PRRC2BQ5JSZ5 2229 aaKnown RBP6.56□□□□□ -1.36
LSM5-203ENST00000409782 TRANK1O15050 2925 aa6.56□□□□□ -1.36
LSM5-203ENST00000409782 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.56□□□□□ -1.36
LSM5-203ENST00000409782 UBE2QL1A1L167 161 aa6.56□□□□□ -1.36
LSM5-203ENST00000409782 LINC01553A4QN01 128 aa6.56□□□□□ -1.36
LSM5-203ENST00000409782 PGPEP1LA6NFU8 196 aa6.56□□□□□ -1.36
LSM5-203ENST00000409782 SAC3D1A6NKF1 404 aa6.56□□□□□ -1.36
LSM5-203ENST00000409782 E7ENX8 843 aa6.56□□□□□ -1.36
LSM5-203ENST00000409782 DKC1O60832 514 aaKnown RBP eCLIP6.56□□□□□ -1.36
LSM5-203ENST00000409782 MMP1P03956 469 aa6.56□□□□□ -1.36
LSM5-203ENST00000409782 RAD52P43351 418 aa6.56□□□□□ -1.36
LSM5-203ENST00000409782 TOB1P50616 345 aaPredicted RBP6.56□□□□□ -1.36
LSM5-203ENST00000409782 DGKEP52429 567 aa6.56□□□□□ -1.36
LSM5-203ENST00000409782 HMGN5P82970 282 aaKnown RBP6.56□□□□□ -1.36
LSM5-203ENST00000409782 TAP2Q03519 686 aa6.56□□□□□ -1.36
LSM5-203ENST00000409782 PPP2R5CQ13362 524 aa6.56□□□□□ -1.36
LSM5-203ENST00000409782 RIN1Q13671 783 aa6.56□□□□□ -1.36
LSM5-203ENST00000409782 BAK1Q16611 211 aa6.56□□□□□ -1.36
LSM5-203ENST00000409782 UGCGQ16739 394 aa6.56□□□□□ -1.36
LSM5-203ENST00000409782 NRN1LQ496H8 165 aa6.56□□□□□ -1.36
LSM5-203ENST00000409782 WDR45BQ5MNZ6 344 aa6.56□□□□□ -1.36
LSM5-203ENST00000409782 ICE2Q659A1 982 aa6.56□□□□□ -1.36
LSM5-203ENST00000409782 ACAD10Q6JQN1 1059 aa6.56□□□□□ -1.36
LSM5-203ENST00000409782 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.56□□□□□ -1.361e-10■■■□□ 17.1
LSM5-203ENST00000409782 MIER3Q7Z3K6 550 aa6.56□□□□□ -1.36
LSM5-203ENST00000409782 DIS3L2Q8IYB7 885 aaKnown RBP6.56□□□□□ -1.36
LSM5-203ENST00000409782 OR8H2Q8N162 312 aa6.56□□□□□ -1.36
LSM5-203ENST00000409782 CFAP52Q8N1V2 620 aa6.56□□□□□ -1.36
LSM5-203ENST00000409782 LINC01465Q8N7H1 131 aa6.56□□□□□ -1.36
LSM5-203ENST00000409782 CEP70Q8NHQ1 597 aa6.56□□□□□ -1.36
LSM5-203ENST00000409782 TBC1D15Q8TC07 691 aa6.56□□□□□ -1.36
LSM5-203ENST00000409782 ABHD5Q8WTS1 349 aa6.56□□□□□ -1.36
LSM5-203ENST00000409782 TFAP2CQ92754 450 aa6.56□□□□□ -1.36
LSM5-203ENST00000409782 SLC46A1Q96NT5 459 aa6.56□□□□□ -1.36
LSM5-203ENST00000409782 TGS1Q96RS0 853 aaKnown RBP6.56□□□□□ -1.36
LSM5-203ENST00000409782 MAP7D2Q96T17 732 aa6.56□□□□□ -1.36
LSM5-203ENST00000409782 YME1L1Q96TA2 773 aa6.56□□□□□ -1.36
LSM5-203ENST00000409782 SMOQ99835 787 aa6.56□□□□□ -1.36
LSM5-203ENST00000409782 REEP2Q9BRK0 252 aa6.56□□□□□ -1.36
LSM5-203ENST00000409782 LMAN2LQ9H0V9 348 aa6.56□□□□□ -1.36
LSM5-203ENST00000409782 VPS16Q9H269 839 aa6.56□□□□□ -1.36
LSM5-203ENST00000409782 NELFAQ9H3P2 528 aa6.56□□□□□ -1.36
LSM5-203ENST00000409782 KCNMB3Q9NPA1 279 aa6.56□□□□□ -1.36
LSM5-203ENST00000409782 DNAJB11Q9UBS4 358 aa6.56□□□□□ -1.36
LSM5-203ENST00000409782 BRWD1Q9NSI6 2320 aa6.56□□□□□ -1.36
LSM5-203ENST00000409782 TTC3P53804 2025 aa6.55□□□□□ -1.36
LSM5-203ENST00000409782 ADGRA3Q8IWK6 1321 aa6.55□□□□□ -1.36
LSM5-203ENST00000409782 WDR81Q562E7 1941 aa6.55□□□□□ -1.36
LSM5-203ENST00000409782 CD3EAPO15446 510 aaKnown RBP6.55□□□□□ -1.36
LSM5-203ENST00000409782 CCNT1O60563 726 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms