RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 GRID2O43424 1007 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 ENDOD1O94919 500 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 VNN1O95497 513 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 ARP10275 920 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 CDH1P12830 882 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 RBL1P28749 1068 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 SPRP35270 261 aaPredicted RBP5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 GRK3P35626 688 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 NR4A2P43354 598 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 IST1P53990 364 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 CDH6P55285 790 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 COPZ1P61923 177 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 GTF2IP78347 998 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 ECT2LQ008S8 904 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 IFITM3Q01628 133 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 TNK2Q07912 1038 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 RALGDSQ12967 914 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 MMRN1Q13201 1228 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 CBX2Q14781 532 aaPredicted RBP5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 CYBRD1Q53TN4 286 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 CYP4A22Q5TCH4 519 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 XAF1Q6GPH4 301 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 KIAA1841Q6NSI8 718 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 GPAT2Q6NUI2 795 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 CASC4Q6P4E1 433 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 KCNT2Q6UVM3 1135 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 RFPL4BQ6ZWI9 263 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 PODNQ7Z5L7 613 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 OFCC1Q8IZS5 231 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 SIX5Q8N196 739 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 SCML4Q8N228 414 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 CLIP4Q8N3C7 705 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 ANKRD52Q8NB46 1076 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 SHCBP1Q8NEM2 672 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 ADAM32Q8TC27 787 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 ATL1Q8WXF7 558 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 HDAC11Q96DB2 347 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 PPP1R36Q96LQ0 422 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 CSF3RQ99062 836 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 NMRAL1Q9HBL8 299 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 ANKHQ9HCJ1 492 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 TBC1D13Q9NVG8 400 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 ASNSD1Q9NWL6 643 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 PI4KBQ9UBF8 816 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 MORF4L1Q9UBU8 362 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 PCSK1NQ9UHG2 260 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 AURKCQ9UQB9 309 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 EIF3LQ9Y262 564 aaKnown RBP5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 N6AMT1Q9Y5N5 214 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 SBF2Q86WG5 1849 aa5.9□□□□□ -1.46
R3HDM1-202ENST00000409478 WDR27A2RRH5 827 aa5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 H0YCG3 227 aa5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 APOL1O14791 398 aa5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 HOXC11O43248 304 aaPredicted RBP5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 SYNCRIPO60506 623 aaKnown RBP5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 PIGNO95427 931 aa5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 CFBP00751 764 aa5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 ABCB1P08183 1280 aaPredicted RBP5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 UBL4AP11441 157 aa5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 TFE3P19532 575 aaPredicted RBP5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 MIPP30301 263 aa5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 POLR2IP36954 125 aaKnown RBP5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 RPS9P46781 194 aaKnown RBP5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 SNAP25P60880 206 aa5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 IGBP1P78318 339 aa5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 BNIP2Q12982 314 aa5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 KRR1Q13601 381 aaKnown RBP5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 SKIV2LQ15477 1246 aaKnown RBP5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 CCDC14Q49A88 953 aa5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 MFSD14BQ5SR56 506 aa5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 TMEM198Q66K66 360 aa5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 GK5Q6ZS86 529 aa5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 C14orf80Q86SX3 495 aa5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 MFSD4AQ8N468 514 aa5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 ASCC1Q8N9N2 400 aaKnown RBP5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 MAELQ96JY0 434 aaKnown RBP5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 TSNARE1Q96NA8 513 aa5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 RNF157Q96PX1 679 aa5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 SNX18Q96RF0 628 aa5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 SLC25A23Q9BV35 468 aa5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 FUNDC2Q9BWH2 189 aa5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 ING2Q9H160 280 aa5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 TRIT1Q9H3H1 467 aaKnown RBP5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 SPC25Q9HBM1 224 aa5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 INTS10Q9NVR2 710 aaKnown RBP5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 NPAP1Q9NZP6 1156 aa5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 DGKBQ9Y6T7 804 aa5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 LTBP4Q8N2S1 1624 aa5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 SAGE2PA6NJ88 616 aa5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 TAF4O00268 1085 aa5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 CHRNGP07510 517 aa5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 IL1R1P14778 569 aa5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 M6PRP20645 277 aa5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 CD40LGP29965 261 aa5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 GRIK1P39086 918 aa5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 GRIA4P48058 902 aa5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 GABARAPL2P60520 117 aa5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 YWHAEP62258 255 aaKnown RBP5.9□□□□□ -1.47
R3HDM1-202ENST00000409478 ADARB1P78563 741 aaKnown RBP5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms