RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 ZFXP17010 805 aaPredicted RBP20.14■□□□□ 0.81
PDLIM2-207ENST00000409417 MX2P20592 715 aa20.14■□□□□ 0.81
PDLIM2-207ENST00000409417 MPLP40238 635 aa20.14■□□□□ 0.81
PDLIM2-207ENST00000409417 GBE1Q04446 702 aa20.14■□□□□ 0.81
PDLIM2-207ENST00000409417 RAD51Q06609 339 aa20.14■□□□□ 0.81
PDLIM2-207ENST00000409417 LBRQ14739 615 aaKnown RBP20.14■□□□□ 0.81
PDLIM2-207ENST00000409417 AGBL4Q5VU57 503 aa20.14■□□□□ 0.81
PDLIM2-207ENST00000409417 VOPP1Q96AW1 172 aa20.14■□□□□ 0.81
PDLIM2-207ENST00000409417 RBM41Q96IZ5 413 aaKnown RBP20.14■□□□□ 0.81
PDLIM2-207ENST00000409417 PSKH2Q96QS6 385 aa20.14■□□□□ 0.81
PDLIM2-207ENST00000409417 CINPQ9BW66 212 aaPredicted RBP20.14■□□□□ 0.81
PDLIM2-207ENST00000409417 HDAC8Q9BY41 377 aa20.14■□□□□ 0.81
PDLIM2-207ENST00000409417 C6orf106Q9H6K1 298 aaPredicted RBP20.14■□□□□ 0.81
PDLIM2-207ENST00000409417 DYRK4Q9NR20 520 aa20.14■□□□□ 0.81
PDLIM2-207ENST00000409417 DTLQ9NZJ0 730 aa20.14■□□□□ 0.81
PDLIM2-207ENST00000409417 SEPT3Q9UH03 358 aa20.14■□□□□ 0.81
PDLIM2-207ENST00000409417 NYNRINQ9P2P1 1898 aaKnown RBP20.14■□□□□ 0.81
PDLIM2-207ENST00000409417 CCDC66A2RUB6 948 aa20.13■□□□□ 0.81
PDLIM2-207ENST00000409417 LRRC72A6NJI9 287 aa20.13■□□□□ 0.81
PDLIM2-207ENST00000409417 RNF103O00237 685 aa20.13■□□□□ 0.81
PDLIM2-207ENST00000409417 PLK4O00444 970 aa20.13■□□□□ 0.81
PDLIM2-207ENST00000409417 ITPKAP23677 461 aa20.13■□□□□ 0.81
PDLIM2-207ENST00000409417 ITGB7P26010 798 aa20.13■□□□□ 0.81
PDLIM2-207ENST00000409417 CTNNA2P26232 953 aa20.13■□□□□ 0.81
PDLIM2-207ENST00000409417 HOXD11P31277 338 aaPredicted RBP20.13■□□□□ 0.81
PDLIM2-207ENST00000409417 GKP32189 559 aa20.13■□□□□ 0.81
PDLIM2-207ENST00000409417 DPP6P42658 865 aa20.13■□□□□ 0.81
PDLIM2-207ENST00000409417 RENBPP51606 427 aa20.13■□□□□ 0.81
PDLIM2-207ENST00000409417 ADPRHP54922 357 aa20.13■□□□□ 0.81
PDLIM2-207ENST00000409417 NSUN2Q08J23 767 aaKnown RBP eCLIP20.13■□□□□ 0.81
PDLIM2-207ENST00000409417 SLC10A7Q0GE19 358 aa20.13■□□□□ 0.81
PDLIM2-207ENST00000409417 SLC10A2Q12908 348 aaPredicted RBP20.13■□□□□ 0.81
PDLIM2-207ENST00000409417 TFDP3Q5H9I0 405 aa20.13■□□□□ 0.81
PDLIM2-207ENST00000409417 PLA2G2CQ5R387 149 aa20.13■□□□□ 0.81
PDLIM2-207ENST00000409417 SYCP2LQ5T4T6 812 aa20.13■□□□□ 0.81
PDLIM2-207ENST00000409417 SPOCD1Q6ZMY3 1216 aa20.13■□□□□ 0.81
PDLIM2-207ENST00000409417 PEX26Q7Z412 305 aa20.13■□□□□ 0.81
PDLIM2-207ENST00000409417 NT5DC3Q86UY8 548 aa20.13■□□□□ 0.81
PDLIM2-207ENST00000409417 RFX6Q8HWS3 928 aa20.13■□□□□ 0.81
PDLIM2-207ENST00000409417 SYT12Q8IV01 421 aa20.13■□□□□ 0.81
PDLIM2-207ENST00000409417 TSEN2Q8NCE0 465 aaKnown RBP20.13■□□□□ 0.81
PDLIM2-207ENST00000409417 OR14C36Q8NHC7 312 aa20.13■□□□□ 0.81
PDLIM2-207ENST00000409417 NSMCE1Q8WV22 266 aa20.13■□□□□ 0.81
PDLIM2-207ENST00000409417 ARRDC3Q96B67 414 aa20.13■□□□□ 0.81
PDLIM2-207ENST00000409417 ZNF830Q96NB3 372 aaPredicted RBP20.13■□□□□ 0.81
PDLIM2-207ENST00000409417 TSGA13Q96PP4 275 aa20.13■□□□□ 0.81
PDLIM2-207ENST00000409417 OSBPL1AQ9BXW6 950 aa20.13■□□□□ 0.81
PDLIM2-207ENST00000409417 CPEB1Q9BZB8 566 aaKnown RBP20.13■□□□□ 0.81
PDLIM2-207ENST00000409417 GUCA1BQ9UMX6 200 aa20.13■□□□□ 0.81
PDLIM2-207ENST00000409417 TGM1P22735 817 aa20.12■□□□□ 0.81
PDLIM2-207ENST00000409417 HOXD12P35452 270 aa20.12■□□□□ 0.81
PDLIM2-207ENST00000409417 CSNK1DP48730 415 aa20.12■□□□□ 0.81
PDLIM2-207ENST00000409417 SPEM2Q0P670 501 aa20.12■□□□□ 0.81
PDLIM2-207ENST00000409417 TFDP2Q14188 446 aa20.12■□□□□ 0.81
PDLIM2-207ENST00000409417 GSE1Q14687 1217 aa20.12■□□□□ 0.81
PDLIM2-207ENST00000409417 ZNF805Q5CZA5 627 aa20.12■□□□□ 0.81
PDLIM2-207ENST00000409417 WDR45BQ5MNZ6 344 aa20.12■□□□□ 0.81
PDLIM2-207ENST00000409417 PIP5KL1Q5T9C9 394 aa20.12■□□□□ 0.81
PDLIM2-207ENST00000409417 NCEH1Q6PIU2 408 aa20.12■□□□□ 0.81
PDLIM2-207ENST00000409417 ZNF662Q6ZS27 426 aa20.12■□□□□ 0.81
PDLIM2-207ENST00000409417 ERN2Q76MJ5 926 aaKnown RBP20.12■□□□□ 0.81
PDLIM2-207ENST00000409417 GPR161Q8N6U8 529 aaKnown RBP20.12■□□□□ 0.81
PDLIM2-207ENST00000409417 OR2T34Q8NGX1 318 aa20.12■□□□□ 0.81
PDLIM2-207ENST00000409417 DNASE2BQ8WZ79 361 aa20.12■□□□□ 0.81
PDLIM2-207ENST00000409417 PIGKQ92643 395 aa20.12■□□□□ 0.81
PDLIM2-207ENST00000409417 FATE1Q969F0 183 aa20.12■□□□□ 0.81
PDLIM2-207ENST00000409417 EXOC2Q96KP1 924 aa20.12■□□□□ 0.81
PDLIM2-207ENST00000409417 KDM4CQ9H3R0 1056 aa20.12■□□□□ 0.81
PDLIM2-207ENST00000409417 EVLQ9UI08 416 aaPredicted RBP20.12■□□□□ 0.81
PDLIM2-207ENST00000409417 PILRBQ9UKJ0 227 aa20.12■□□□□ 0.81
PDLIM2-207ENST00000409417 AMFRQ9UKV5 643 aa20.12■□□□□ 0.81
PDLIM2-207ENST00000409417 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.12■□□□□ 0.81
PDLIM2-207ENST00000409417 MEI4A8MW99 385 aa20.11■□□□□ 0.81
PDLIM2-207ENST00000409417 PLRG1O43660 514 aaKnown RBP20.11■□□□□ 0.81
PDLIM2-207ENST00000409417 MAP3K6O95382 1288 aa20.11■□□□□ 0.81
PDLIM2-207ENST00000409417 CCNCP24863 283 aa20.11■□□□□ 0.81
PDLIM2-207ENST00000409417 HSPA9P38646 679 aaKnown RBP20.11■□□□□ 0.81
PDLIM2-207ENST00000409417 PEX5P50542 639 aa20.11■□□□□ 0.81
PDLIM2-207ENST00000409417 HNRNPDQ14103 355 aaKnown RBP20.11■□□□□ 0.81
PDLIM2-207ENST00000409417 GRM3Q14832 879 aa20.11■□□□□ 0.81
PDLIM2-207ENST00000409417 CSRP2Q16527 193 aa20.11■□□□□ 0.81
PDLIM2-207ENST00000409417 MARC1Q5VT66 337 aa20.11■□□□□ 0.81
PDLIM2-207ENST00000409417 TIGD7Q6NT04 549 aaPredicted RBP20.11■□□□□ 0.81
PDLIM2-207ENST00000409417 CCDC50Q8IVM0 306 aa20.11■□□□□ 0.81
PDLIM2-207ENST00000409417 PDLIM2Q96JY6 352 aa20.11■□□□□ 0.81
PDLIM2-207ENST00000409417 VPS45Q9NRW7 570 aa20.11■□□□□ 0.81
PDLIM2-207ENST00000409417 SEMA4GQ9NTN9 838 aa20.11■□□□□ 0.81
PDLIM2-207ENST00000409417 TMEM74BQ9NUR3 256 aa20.11■□□□□ 0.81
PDLIM2-207ENST00000409417 HEY1Q9Y5J3 304 aa20.11■□□□□ 0.81
PDLIM2-207ENST00000409417 FAM47DPA6NHR8 397 aa20.11■□□□□ 0.81
PDLIM2-207ENST00000409417 MIF4GDA9UHW6 222 aaKnown RBP20.11■□□□□ 0.81
PDLIM2-207ENST00000409417 C10orf142B7Z368 130 aa20.11■□□□□ 0.81
PDLIM2-207ENST00000409417 MUSKO15146 869 aa20.11■□□□□ 0.81
PDLIM2-207ENST00000409417 MATN3O15232 486 aa20.11■□□□□ 0.81
PDLIM2-207ENST00000409417 UGT2B4P06133 528 aa20.11■□□□□ 0.81
PDLIM2-207ENST00000409417 ZNF806P0C7X5 589 aa20.11■□□□□ 0.81
PDLIM2-207ENST00000409417 KRT10P13645 584 aa20.11■□□□□ 0.81
PDLIM2-207ENST00000409417 RGRP47804 291 aa20.11■□□□□ 0.81
PDLIM2-207ENST00000409417 NR2C2P49116 596 aa20.11■□□□□ 0.81
PDLIM2-207ENST00000409417 RWDD2BP57060 319 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms