RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 TMX2Q9Y320 296 aa17.85■□□□□ 0.45
SMPD4-202ENST00000409031 FAM220BPB1ANY3 271 aa17.85■□□□□ 0.45
SMPD4-202ENST00000409031 AOC1P19801 751 aa17.85■□□□□ 0.45
SMPD4-202ENST00000409031 ZNF135P52742 658 aaPredicted RBP17.85■□□□□ 0.45
SMPD4-202ENST00000409031 TRIM71Q2Q1W2 868 aaKnown RBP17.85■□□□□ 0.45
SMPD4-202ENST00000409031 PPM1LQ5SGD2 360 aa17.85■□□□□ 0.45
SMPD4-202ENST00000409031 IKBIPQ70UQ0 350 aa17.85■□□□□ 0.45
SMPD4-202ENST00000409031 ASRGL1Q7L266 308 aa17.85■□□□□ 0.45
SMPD4-202ENST00000409031 YTHDF1Q9BYJ9 559 aaKnown RBP17.85■□□□□ 0.45
SMPD4-202ENST00000409031 PRELID1Q9Y255 219 aa17.85■□□□□ 0.45
SMPD4-202ENST00000409031 CASZ1Q86V15 1759 aa17.85■□□□□ 0.45
SMPD4-202ENST00000409031 ARIH2O95376 493 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 APBA3O96018 575 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 IDO1P14902 403 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 IDH2P48735 452 aaKnown RBP17.84■□□□□ 0.45
SMPD4-202ENST00000409031 OLR1P78380 273 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 CDK18Q07002 472 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 NFIAQ12857 509 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 PWP1Q13610 501 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 MOGQ16653 247 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 DCAF4L1Q3SXM0 396 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 ANKRD22Q5VYY1 191 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 CASP12Q6UXS9 341 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 ADGRG6Q86SQ4 1221 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 SLC41A1Q8IVJ1 513 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 SCUBE3Q8IX30 993 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 FOPNLQ96NB1 174 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 OMDQ99983 421 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 BTN3A3O00478 584 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 CPSF4O95639 269 aaKnown RBP17.84■□□□□ 0.45
SMPD4-202ENST00000409031 MMP10P09238 476 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 CAPGP40121 348 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 COPZ1P61923 177 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 FAM187BQ17R55 369 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 SFT2D3Q587I9 215 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 C7orf43Q8WVR3 580 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 ELOVL6Q9H5J4 265 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 MBD2Q9UBB5 411 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 PTBP2Q9UKA9 531 aaKnown RBP17.84■□□□□ 0.45
SMPD4-202ENST00000409031 ASB14A6NK59 587 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 COL6A2P12110 1019 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 HMGCS2P54868 508 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 CDH8P55286 799 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 FAR1Q8WVX9 515 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 TBL1YQ9BQ87 522 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 EBF4Q9BQW3 602 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 CCDC59Q9P031 241 aaKnown RBP17.84■□□□□ 0.45
SMPD4-202ENST00000409031 STOML2Q9UJZ1 356 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 G3V2T6 193 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 THRBP10828 461 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 PCNAP12004 261 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 CLCN5P51795 746 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 PRR5LQ6MZQ0 368 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 SPPL2CQ8IUH8 684 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 SYTL5Q8TDW5 730 aaPredicted RBP17.84■□□□□ 0.45
SMPD4-202ENST00000409031 FAM163AQ96GL9 167 aaPredicted RBP17.84■□□□□ 0.45
SMPD4-202ENST00000409031 ACTR8Q9H981 624 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 SLC38A7Q9NVC3 462 aa17.84■□□□□ 0.45
SMPD4-202ENST00000409031 A0A087WZ62 844 aa17.83■□□□□ 0.45
SMPD4-202ENST00000409031 ATP6AP2A0A1C7CYW4 349 aa17.83■□□□□ 0.45
SMPD4-202ENST00000409031 CCNT2O60583 730 aaKnown RBP17.83■□□□□ 0.45
SMPD4-202ENST00000409031 ATP6AP2O75787 350 aa17.83■□□□□ 0.45
SMPD4-202ENST00000409031 HNRNPLP14866 589 aaKnown RBP eCLIP17.83■□□□□ 0.45
SMPD4-202ENST00000409031 MYL12AP19105 171 aa17.83■□□□□ 0.45
SMPD4-202ENST00000409031 TDRD10Q5VZ19 366 aaKnown RBP17.83■□□□□ 0.45
SMPD4-202ENST00000409031 ZNF544Q6NX49 715 aa17.83■□□□□ 0.45
SMPD4-202ENST00000409031 ILDR2Q71H61 639 aa17.83■□□□□ 0.45
SMPD4-202ENST00000409031 ANKRD23Q86SG2 305 aa17.83■□□□□ 0.45
SMPD4-202ENST00000409031 HIPK1Q86Z02 1210 aa17.83■□□□□ 0.45
SMPD4-202ENST00000409031 DEPDC4Q8N2C3 294 aa17.83■□□□□ 0.45
SMPD4-202ENST00000409031 LRRC17Q8N6Y2 441 aa17.83■□□□□ 0.45
SMPD4-202ENST00000409031 ASB7Q9H672 318 aa17.83■□□□□ 0.45
SMPD4-202ENST00000409031 ALG9Q9H6U8 611 aa17.83■□□□□ 0.45
SMPD4-202ENST00000409031 ERAP1Q9NZ08 941 aa17.83■□□□□ 0.45
SMPD4-202ENST00000409031 TMEM9Q9P0T7 183 aa17.83■□□□□ 0.45
SMPD4-202ENST00000409031 CXCL8P10145 99 aa17.83■□□□□ 0.45
SMPD4-202ENST00000409031 S100A3P33764 101 aa17.83■□□□□ 0.45
SMPD4-202ENST00000409031 PPP3CCP48454 512 aa17.83■□□□□ 0.45
SMPD4-202ENST00000409031 PSMD5Q16401 504 aa17.83■□□□□ 0.45
SMPD4-202ENST00000409031 CARTPTQ16568 116 aa17.83■□□□□ 0.45
SMPD4-202ENST00000409031 KIAA0408Q6ZU52 694 aa17.83■□□□□ 0.45
SMPD4-202ENST00000409031 P2RY8Q86VZ1 359 aa17.83■□□□□ 0.45
SMPD4-202ENST00000409031 MFSD14AQ96MC6 490 aa17.83■□□□□ 0.45
SMPD4-202ENST00000409031 PHF12Q96QT6 1004 aa17.83■□□□□ 0.45
SMPD4-202ENST00000409031 NODALQ96S42 347 aa17.83■□□□□ 0.45
SMPD4-202ENST00000409031 HGH1Q9BTY7 390 aa17.83■□□□□ 0.45
SMPD4-202ENST00000409031 DSEQ9UL01 958 aa17.83■□□□□ 0.45
SMPD4-202ENST00000409031 E7ENX8 843 aa17.83■□□□□ 0.44
SMPD4-202ENST00000409031 FARP2O94887 1054 aaPredicted RBP17.83■□□□□ 0.44
SMPD4-202ENST00000409031 CNPP09543 421 aaKnown RBP17.83■□□□□ 0.44
SMPD4-202ENST00000409031 SLC7A1P30825 629 aa17.83■□□□□ 0.44
SMPD4-202ENST00000409031 TCF7P36402 384 aaPredicted RBP17.83■□□□□ 0.44
SMPD4-202ENST00000409031 TWF1Q12792 350 aa17.83■□□□□ 0.44
SMPD4-202ENST00000409031 PLET1Q6UQ28 207 aa17.83■□□□□ 0.44
SMPD4-202ENST00000409031 FNDC8Q8TC99 324 aa17.83■□□□□ 0.44
SMPD4-202ENST00000409031 PDGFCQ9NRA1 345 aa17.83■□□□□ 0.44
SMPD4-202ENST00000409031 NOCTQ9UK39 431 aaKnown RBP17.83■□□□□ 0.44
SMPD4-202ENST00000409031 KCNU1A8MYU2 1149 aa17.83■□□□□ 0.44
SMPD4-202ENST00000409031 CLCN2P51788 898 aa17.83■□□□□ 0.44
SMPD4-202ENST00000409031 SPRED3Q2MJR0 410 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms