RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 ZMYM5Q9UJ78 669 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 ANGPT4Q9Y264 503 aa13.1□□□□□ -0.31
RNF43-201ENST00000407977 KCNQ2O43526 872 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 SSNA1O43805 119 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 KLRC4O43908 158 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 RAB27AP51159 221 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 CLYBLQ8N0X4 340 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 USP7Q93009 1102 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 REXO5Q96IC2 774 aaKnown RBP13.09□□□□□ -0.31
RNF43-201ENST00000407977 TMEM134Q9H6X4 195 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 SEMA4BQ9NPR2 832 aaPredicted RBP13.09□□□□□ -0.31
RNF43-201ENST00000407977 RCCD1A6NED2 376 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 GTF2E2P29084 291 aaKnown RBP13.09□□□□□ -0.31
RNF43-201ENST00000407977 CHKAP35790 457 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 ATP6V0D1P61421 351 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 CCDC36Q8IYA8 594 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 MCFD2Q8NI22 146 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 RAET1EQ8TD07 263 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 SELENOMQ8WWX9 145 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 MED8Q96G25 268 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 HSFY1Q96LI6 401 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 FDXACB1Q9BRP7 624 aaPredicted RBP13.09□□□□□ -0.31
RNF43-201ENST00000407977 RACGAP1Q9H0H5 632 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 ATP13A1Q9HD20 1204 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 GALNT8Q9NY28 637 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 TARBP1Q13395 1621 aaKnown RBP13.09□□□□□ -0.31
RNF43-201ENST00000407977 hCG_1818297A0A087WSY0 165 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 BPGMP07738 259 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 NFICP08651 508 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 FAM86B2P0C5J1 330 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 TYMPP19971 482 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 CASP5P51878 434 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 BACE1P56817 501 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 PGM5Q15124 567 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 SCUBE3Q8IX30 993 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 PHACTR4Q8IZ21 702 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 C7orf26Q96N11 449 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 CCDC59Q9P031 241 aaKnown RBP13.09□□□□□ -0.31
RNF43-201ENST00000407977 AKAP7Q9P0M2 348 aaPredicted RBP13.09□□□□□ -0.31
RNF43-201ENST00000407977 RNF181Q9P0P0 153 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 EFR3BQ9Y2G0 817 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 E5RJQ4 531 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 CKMP06732 381 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 POLD2P49005 469 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 CRY1Q16526 586 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 TYSND1Q2T9J0 566 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 SLC27A1Q6PCB7 646 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 C1orf186Q6ZWK4 172 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 FAM47BQ8NA70 645 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 OR52L1Q8NGH7 329 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 RMI1Q9H9A7 625 aa13.09□□□□□ -0.31
RNF43-201ENST00000407977 MYCP01106 439 aaPredicted RBP13.08□□□□□ -0.31
RNF43-201ENST00000407977 CATP04040 527 aaKnown RBP13.08□□□□□ -0.31
RNF43-201ENST00000407977 FGFR1P11362 822 aa13.08□□□□□ -0.31
RNF43-201ENST00000407977 PSMB4P28070 264 aa13.08□□□□□ -0.31
RNF43-201ENST00000407977 NFIAQ12857 509 aa13.08□□□□□ -0.31
RNF43-201ENST00000407977 PIK3C3Q8NEB9 887 aa13.08□□□□□ -0.31
RNF43-201ENST00000407977 KAT5Q92993 513 aa13.08□□□□□ -0.31
RNF43-201ENST00000407977 SSU72Q9NP77 194 aaKnown RBP13.08□□□□□ -0.31
RNF43-201ENST00000407977 ARL15Q9NXU5 204 aa13.08□□□□□ -0.31
RNF43-201ENST00000407977 TAS2R14Q9NYV8 317 aa13.08□□□□□ -0.31
RNF43-201ENST00000407977 PCDHB5Q9Y5E4 795 aa13.08□□□□□ -0.31
RNF43-201ENST00000407977 FAM86B1E9PN63 330 aa13.08□□□□□ -0.32
RNF43-201ENST00000407977 PLK4O00444 970 aa13.08□□□□□ -0.32
RNF43-201ENST00000407977 UGT2B11O75310 529 aa13.08□□□□□ -0.32
RNF43-201ENST00000407977 TRUB2O95900 331 aaKnown RBP13.08□□□□□ -0.32
RNF43-201ENST00000407977 LYNP07948 512 aa13.08□□□□□ -0.32
RNF43-201ENST00000407977 NR2F6P10588 404 aa13.08□□□□□ -0.32
RNF43-201ENST00000407977 ZNF12P17014 697 aa13.08□□□□□ -0.32
RNF43-201ENST00000407977 FMO4P31512 558 aa13.08□□□□□ -0.32
RNF43-201ENST00000407977 GMFBP60983 142 aa13.08□□□□□ -0.32
RNF43-201ENST00000407977 PGBD3Q8N328 593 aa13.08□□□□□ -0.32
RNF43-201ENST00000407977 OR52K1Q8NGK4 314 aa13.08□□□□□ -0.32
RNF43-201ENST00000407977 WDR48Q8TAF3 677 aa13.08□□□□□ -0.32
RNF43-201ENST00000407977 DNAJB14Q8TBM8 379 aa13.08□□□□□ -0.32
RNF43-201ENST00000407977 CD101Q93033 1021 aa13.08□□□□□ -0.32
RNF43-201ENST00000407977 CPB2Q96IY4 423 aa13.08□□□□□ -0.32
RNF43-201ENST00000407977 KLQ9UEF7 1012 aa13.08□□□□□ -0.32
RNF43-201ENST00000407977 FADS3Q9Y5Q0 445 aa13.08□□□□□ -0.32
RNF43-201ENST00000407977 WWP2O00308 870 aa13.08□□□□□ -0.32
RNF43-201ENST00000407977 DHFRP00374 187 aa13.08□□□□□ -0.32
RNF43-201ENST00000407977 HGFP14210 728 aa13.08□□□□□ -0.32
RNF43-201ENST00000407977 PPP3CAQ08209 521 aa13.08□□□□□ -0.32
RNF43-201ENST00000407977 CXXC5Q7LFL8 322 aaKnown RBP13.08□□□□□ -0.32
RNF43-201ENST00000407977 TMEM86AQ8N2M4 240 aa13.08□□□□□ -0.32
RNF43-201ENST00000407977 GSTCDQ8NEC7 633 aa13.08□□□□□ -0.32
RNF43-201ENST00000407977 HELQQ8TDG4 1101 aa13.08□□□□□ -0.32
RNF43-201ENST00000407977 PTPRHQ9HD43 1115 aa13.08□□□□□ -0.32
RNF43-201ENST00000407977 KPNA5O15131 536 aa13.08□□□□□ -0.32
RNF43-201ENST00000407977 ULK1O75385 1050 aa13.08□□□□□ -0.32
RNF43-201ENST00000407977 RTN3O95197 1032 aaPredicted RBP13.08□□□□□ -0.32
RNF43-201ENST00000407977 ETS2P15036 469 aa13.08□□□□□ -0.32
RNF43-201ENST00000407977 SP100P23497 879 aaPredicted RBP13.08□□□□□ -0.32
RNF43-201ENST00000407977 PBLDP30039 288 aaPredicted RBP13.08□□□□□ -0.32
RNF43-201ENST00000407977 PRDX6P30041 224 aa13.08□□□□□ -0.32
RNF43-201ENST00000407977 ADSLP30566 484 aaPredicted RBP13.08□□□□□ -0.32
RNF43-201ENST00000407977 PBX1P40424 430 aa13.08□□□□□ -0.32
RNF43-201ENST00000407977 OVOS1Q6IE37 1185 aa13.08□□□□□ -0.32
RNF43-201ENST00000407977 AADACL2Q6P093 401 aa13.08□□□□□ -0.32
RNF43-201ENST00000407977 BHLHB9Q6PI77 547 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms