RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 ERP27Q96DN0 273 aa24.97■■□□□ 1.59
DNMT3A-206ENST00000406659 RHOJQ9H4E5 214 aa24.97■■□□□ 1.59
DNMT3A-206ENST00000406659 LTBP2Q14767 1821 aa24.97■■□□□ 1.59
DNMT3A-206ENST00000406659 A0A096LPK6 155 aa24.96■■□□□ 1.59
DNMT3A-206ENST00000406659 TTC24A2A3L6 582 aaPredicted RBP24.96■■□□□ 1.59
DNMT3A-206ENST00000406659 IRF1P10914 325 aa24.96■■□□□ 1.59
DNMT3A-206ENST00000406659 ARCN1P48444 511 aaKnown RBP24.96■■□□□ 1.59
DNMT3A-206ENST00000406659 EPHB3P54753 998 aa24.96■■□□□ 1.59
DNMT3A-206ENST00000406659 CCDC153Q494R4 210 aa24.96■■□□□ 1.59
DNMT3A-206ENST00000406659 ZC3HC1Q86WB0 502 aaKnown RBP24.96■■□□□ 1.59
DNMT3A-206ENST00000406659 CNTN4Q8IWV2 1026 aa24.96■■□□□ 1.59
DNMT3A-206ENST00000406659 ARRDC2Q8TBH0 407 aa24.96■■□□□ 1.59
DNMT3A-206ENST00000406659 RANBP9Q96S59 729 aa24.96■■□□□ 1.59
DNMT3A-206ENST00000406659 POLR1EQ9GZS1 481 aaKnown RBP24.96■■□□□ 1.59
DNMT3A-206ENST00000406659 CAB39LQ9H9S4 337 aa24.96■■□□□ 1.59
DNMT3A-206ENST00000406659 TREX1Q9NSU2 369 aa24.96■■□□□ 1.59
DNMT3A-206ENST00000406659 TMEM216Q9P0N5 145 aa24.96■■□□□ 1.59
DNMT3A-206ENST00000406659 UXTQ9UBK9 157 aaPredicted RBP24.96■■□□□ 1.59
DNMT3A-206ENST00000406659 SLC39A10Q9ULF5 831 aa24.96■■□□□ 1.59
DNMT3A-206ENST00000406659 E2F8A0AVK6 867 aa24.95■■□□□ 1.59
DNMT3A-206ENST00000406659 CLDN11O75508 207 aa24.95■■□□□ 1.59
DNMT3A-206ENST00000406659 KLKB1P03952 638 aa24.95■■□□□ 1.59
DNMT3A-206ENST00000406659 ITGB8P26012 769 aa24.95■■□□□ 1.59
DNMT3A-206ENST00000406659 NCALDP61601 193 aa24.95■■□□□ 1.59
DNMT3A-206ENST00000406659 RPS24P62847 133 aaKnown RBP24.95■■□□□ 1.59
DNMT3A-206ENST00000406659 GRM3Q14832 879 aa24.95■■□□□ 1.59
DNMT3A-206ENST00000406659 IL31Q6EBC2 164 aa24.95■■□□□ 1.59
DNMT3A-206ENST00000406659 KIAA0930Q6ICG6 404 aaPredicted RBP24.95■■□□□ 1.59
DNMT3A-206ENST00000406659 DNAJB7Q7Z6W7 309 aaPredicted RBP24.95■■□□□ 1.59
DNMT3A-206ENST00000406659 TADA1Q96BN2 335 aa24.95■■□□□ 1.59
DNMT3A-206ENST00000406659 GPR22Q99680 433 aa24.95■■□□□ 1.59
DNMT3A-206ENST00000406659 SEMA3CQ99985 751 aa24.95■■□□□ 1.59
DNMT3A-206ENST00000406659 KLF16Q9BXK1 252 aaPredicted RBP24.95■■□□□ 1.59
DNMT3A-206ENST00000406659 RNF38Q9H0F5 515 aa24.95■■□□□ 1.59
DNMT3A-206ENST00000406659 MRPL17Q9NRX2 175 aaKnown RBP24.95■■□□□ 1.59
DNMT3A-206ENST00000406659 WBP1LQ9NX94 342 aa24.95■■□□□ 1.59
DNMT3A-206ENST00000406659 C2orf78A6NCI8 922 aa24.95■■□□□ 1.58
DNMT3A-206ENST00000406659 TRIM43BA6NCK2 446 aa24.95■■□□□ 1.58
DNMT3A-206ENST00000406659 GSRP00390 522 aa24.95■■□□□ 1.58
DNMT3A-206ENST00000406659 RAG1P15918 1043 aa24.95■■□□□ 1.58
DNMT3A-206ENST00000406659 GJA8P48165 433 aa24.95■■□□□ 1.58
DNMT3A-206ENST00000406659 OCRLQ01968 901 aa24.95■■□□□ 1.58
DNMT3A-206ENST00000406659 TTC31Q49AM3 519 aaPredicted RBP24.95■■□□□ 1.58
DNMT3A-206ENST00000406659 CRLF3Q8IUI8 442 aa24.95■■□□□ 1.58
DNMT3A-206ENST00000406659 TCEAL8Q8IYN2 117 aa24.95■■□□□ 1.58
DNMT3A-206ENST00000406659 BBS5Q8N3I7 341 aa24.95■■□□□ 1.58
DNMT3A-206ENST00000406659 OR7D4Q8NG98 312 aa24.95■■□□□ 1.58
DNMT3A-206ENST00000406659 TRIM43Q96BQ3 446 aaPredicted RBP24.95■■□□□ 1.58
DNMT3A-206ENST00000406659 YME1L1Q96TA2 773 aa24.95■■□□□ 1.58
DNMT3A-206ENST00000406659 DDX50Q9BQ39 737 aaKnown RBP24.95■■□□□ 1.58
DNMT3A-206ENST00000406659 FAM167BQ9BTA0 163 aa24.95■■□□□ 1.58
DNMT3A-206ENST00000406659 SPON2Q9BUD6 331 aa24.95■■□□□ 1.58
DNMT3A-206ENST00000406659 SLC40A1Q9NP59 571 aa24.95■■□□□ 1.58
DNMT3A-206ENST00000406659 MIA3Q5JRA6 1907 aa24.94■■□□□ 1.58
DNMT3A-206ENST00000406659 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP24.94■■□□□ 1.58
DNMT3A-206ENST00000406659 A0A0D9SEW6 157 aa24.94■■□□□ 1.58
DNMT3A-206ENST00000406659 AHSGP02765 367 aa24.94■■□□□ 1.58
DNMT3A-206ENST00000406659 C2P06681 752 aa24.94■■□□□ 1.58
DNMT3A-206ENST00000406659 ARNTP27540 789 aa24.94■■□□□ 1.58
DNMT3A-206ENST00000406659 NUMBP49757 651 aa24.94■■□□□ 1.58
DNMT3A-206ENST00000406659 ZNF177Q13360 481 aaPredicted RBP24.94■■□□□ 1.58
DNMT3A-206ENST00000406659 CES4AQ5XG92 561 aa24.94■■□□□ 1.58
DNMT3A-206ENST00000406659 FBXW10Q5XX13 1052 aa24.94■■□□□ 1.58
DNMT3A-206ENST00000406659 TMEM120AQ9BXJ8 343 aa24.94■■□□□ 1.58
DNMT3A-206ENST00000406659 PDFQ9HBH1 243 aa24.94■■□□□ 1.58
DNMT3A-206ENST00000406659 THAP1Q9NVV9 213 aa24.94■■□□□ 1.58
DNMT3A-206ENST00000406659 TLK1Q9UKI8 766 aa24.94■■□□□ 1.58
DNMT3A-206ENST00000406659 CFAP73A6NFT4 308 aa24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 H3BNC9 293 aa24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 SIN3BO75182 1162 aa24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 SNNO75324 88 aaPredicted RBP24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 DLDP09622 509 aaKnown RBP24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 ACRP10323 421 aa24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 GMPRP36959 345 aa24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 CTBP1Q13363 440 aa24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 IHHQ14623 411 aa24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 USP10Q14694 798 aaKnown RBP24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 DLG2Q15700 870 aa24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 SIRPB2Q5JXA9 342 aa24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 ADGRF1Q5T601 910 aa24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 TSTD2Q5T7W7 516 aa24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 MBLAC2Q68D91 279 aa24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 ZCCHC23Q6ZST2 131 aa24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 RAPH1Q70E73 1250 aa24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 DENND6AQ8IWF6 608 aa24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 TMEM199Q8N511 208 aa24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 IFT43Q96FT9 208 aa24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 PRICKLE1Q96MT3 831 aaPredicted RBP24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 KCNK13Q9HB14 408 aa24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 TXLNGQ9NUQ3 528 aa24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 ZNF358Q9NW07 568 aa24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 AGO1Q9UL18 857 aaKnown RBP24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 ANKRD6Q9Y2G4 727 aa24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 INSL5Q9Y5Q6 135 aa24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 MYLKQ15746 1914 aa24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 TSPAN3O60637 253 aa24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 ATP5HO75947 161 aa24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 PRKCGP05129 697 aa24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 RHOCP08134 193 aa24.93■■□□□ 1.58
DNMT3A-206ENST00000406659 KCNA4P22459 653 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms