RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 GABRB3P28472 473 aa16.46■□□□□ 0.23
LSP1-204ENST00000406638 KPNA1P52294 538 aaPredicted RBP16.46■□□□□ 0.23
LSP1-204ENST00000406638 SOX4Q06945 474 aaPredicted RBP16.46■□□□□ 0.23
LSP1-204ENST00000406638 STXBP5Q5T5C0 1151 aa16.46■□□□□ 0.23
LSP1-204ENST00000406638 GPR107Q5VW38 600 aa16.46■□□□□ 0.23
LSP1-204ENST00000406638 NOTUMQ6P988 496 aa16.46■□□□□ 0.23
LSP1-204ENST00000406638 ZNF786Q8N393 782 aa16.46■□□□□ 0.23
LSP1-204ENST00000406638 TDRD5Q8NAT2 981 aaKnown RBP16.46■□□□□ 0.23
LSP1-204ENST00000406638 DLG3Q92796 817 aa16.46■□□□□ 0.23
LSP1-204ENST00000406638 ATXN7L3BQ96GX2 97 aa16.46■□□□□ 0.23
LSP1-204ENST00000406638 NPAS2Q99743 824 aa16.46■□□□□ 0.23
LSP1-204ENST00000406638 TRMT13Q9NUP7 481 aaKnown RBP16.46■□□□□ 0.23
LSP1-204ENST00000406638 TMED5Q9Y3A6 229 aa16.46■□□□□ 0.23
LSP1-204ENST00000406638 PCDHA11Q9Y5I1 949 aa16.46■□□□□ 0.23
LSP1-204ENST00000406638 SCN1AP35498 2009 aa16.46■□□□□ 0.23
LSP1-204ENST00000406638 BMP10O95393 424 aa16.46■□□□□ 0.22
LSP1-204ENST00000406638 CHRNA1P02708 482 aa16.46■□□□□ 0.22
LSP1-204ENST00000406638 GNAO1P09471 354 aa16.46■□□□□ 0.22
LSP1-204ENST00000406638 CKMT2P17540 419 aa16.46■□□□□ 0.22
LSP1-204ENST00000406638 TYK2P29597 1187 aa16.46■□□□□ 0.22
LSP1-204ENST00000406638 TUBA4AP68366 448 aa16.46■□□□□ 0.22
LSP1-204ENST00000406638 LSM12Q3MHD2 195 aaKnown RBP16.46■□□□□ 0.22
LSP1-204ENST00000406638 ZBED5Q49AG3 693 aa16.46■□□□□ 0.22
LSP1-204ENST00000406638 DNAJC14Q6Y2X3 702 aaPredicted RBP16.46■□□□□ 0.22
LSP1-204ENST00000406638 CMC1Q7Z7K0 106 aa16.46■□□□□ 0.22
LSP1-204ENST00000406638 SNX27Q96L92 541 aa16.46■□□□□ 0.22
LSP1-204ENST00000406638 NOL11Q9H8H0 719 aaKnown RBP16.46■□□□□ 0.22
LSP1-204ENST00000406638 CNOT11Q9UKZ1 510 aaKnown RBP16.46■□□□□ 0.22
LSP1-204ENST00000406638 SLC8A2Q9UPR5 921 aa16.46■□□□□ 0.22
LSP1-204ENST00000406638 PCDHB12Q9Y5F1 795 aa16.46■□□□□ 0.22
LSP1-204ENST00000406638 NR2E3Q9Y5X4 410 aa16.46■□□□□ 0.22
LSP1-204ENST00000406638 ETFBP38117 255 aa16.45■□□□□ 0.22
LSP1-204ENST00000406638 CCR10P46092 362 aa16.45■□□□□ 0.22
LSP1-204ENST00000406638 VEGFBP49765 207 aa16.45■□□□□ 0.22
LSP1-204ENST00000406638 EGFLAMQ63HQ2 1017 aa16.45■□□□□ 0.22
LSP1-204ENST00000406638 DCLRE1AQ6PJP8 1040 aa16.45■□□□□ 0.22
LSP1-204ENST00000406638 LYSMD3Q7Z3D4 306 aa16.45■□□□□ 0.22
LSP1-204ENST00000406638 PGAM4Q8N0Y7 254 aa16.45■□□□□ 0.22
LSP1-204ENST00000406638 SMG8Q8ND04 991 aaKnown RBP16.45■□□□□ 0.22
LSP1-204ENST00000406638 RP9Q8TA86 221 aaKnown RBP16.45■□□□□ 0.22
LSP1-204ENST00000406638 LPPQ93052 612 aa16.45■□□□□ 0.22
LSP1-204ENST00000406638 KATNAL1Q9BW62 490 aa16.45■□□□□ 0.22
LSP1-204ENST00000406638 FRMD8Q9BZ67 464 aaPredicted RBP16.45■□□□□ 0.22
LSP1-204ENST00000406638 NAA50Q9GZZ1 169 aaKnown RBP16.45■□□□□ 0.22
LSP1-204ENST00000406638 ASB7Q9H672 318 aa16.45■□□□□ 0.22
LSP1-204ENST00000406638 AGO3Q9H9G7 860 aaKnown RBP16.45■□□□□ 0.22
LSP1-204ENST00000406638 CXorf21Q9HAI6 301 aa16.45■□□□□ 0.22
LSP1-204ENST00000406638 MOCS1Q9NZB8 636 aa16.45■□□□□ 0.22
LSP1-204ENST00000406638 KIAA1522Q9P206 1035 aaPredicted RBP16.45■□□□□ 0.22
LSP1-204ENST00000406638 ALDH1A1P00352 501 aa16.45■□□□□ 0.22
LSP1-204ENST00000406638 CHRNGP07510 517 aa16.45■□□□□ 0.22
LSP1-204ENST00000406638 CCDC130P13994 396 aa16.45■□□□□ 0.22
LSP1-204ENST00000406638 NFKBIAP25963 317 aa16.45■□□□□ 0.22
LSP1-204ENST00000406638 BMXP51813 675 aa16.45■□□□□ 0.22
LSP1-204ENST00000406638 MAPK10P53779 464 aa16.45■□□□□ 0.22
LSP1-204ENST00000406638 IRF5Q13568 498 aa16.45■□□□□ 0.22
LSP1-204ENST00000406638 CYP2A13Q16696 494 aa16.45■□□□□ 0.22
LSP1-204ENST00000406638 ZNF618Q5T7W0 954 aa16.45■□□□□ 0.22
LSP1-204ENST00000406638 METTL21CQ5VZV1 264 aa16.45■□□□□ 0.22
LSP1-204ENST00000406638 NXNQ6DKJ4 435 aa16.45■□□□□ 0.22
LSP1-204ENST00000406638 SETD3Q86TU7 594 aaPredicted RBP16.45■□□□□ 0.22
LSP1-204ENST00000406638 PLD6Q8N2A8 252 aaKnown RBP16.45■□□□□ 0.22
LSP1-204ENST00000406638 PQLC3Q8N755 202 aa16.45■□□□□ 0.22
LSP1-204ENST00000406638 PLD5Q8N7P1 536 aa16.45■□□□□ 0.22
LSP1-204ENST00000406638 C12orf29Q8N999 325 aa16.45■□□□□ 0.22
LSP1-204ENST00000406638 RPF2Q9H7B2 306 aaKnown RBP16.45■□□□□ 0.22
LSP1-204ENST00000406638 TRPC7Q9HCX4 862 aa16.45■□□□□ 0.22
LSP1-204ENST00000406638 H3BMQ9 156 aa16.44■□□□□ 0.22
LSP1-204ENST00000406638 OXSR1O95747 527 aaPredicted RBP16.44■□□□□ 0.22
LSP1-204ENST00000406638 HMGCRP04035 888 aa16.44■□□□□ 0.22
LSP1-204ENST00000406638 ITGA7Q13683 1181 aa16.44■□□□□ 0.22
LSP1-204ENST00000406638 CDO1Q16878 200 aa16.44■□□□□ 0.22
LSP1-204ENST00000406638 RWDD4Q6NW29 188 aaKnown RBP16.44■□□□□ 0.22
LSP1-204ENST00000406638 SLC2A7Q6PXP3 512 aa16.44■□□□□ 0.22
LSP1-204ENST00000406638 SLC4A11Q8NBS3 891 aa16.44■□□□□ 0.22
LSP1-204ENST00000406638 C17orf50Q8WW18 174 aa16.44■□□□□ 0.22
LSP1-204ENST00000406638 LRRC39Q96DD0 335 aa16.44■□□□□ 0.22
LSP1-204ENST00000406638 COG8Q96MW5 612 aa16.44■□□□□ 0.22
LSP1-204ENST00000406638 CPXM1Q96SM3 734 aa16.44■□□□□ 0.22
LSP1-204ENST00000406638 MRPL45Q9BRJ2 306 aaKnown RBP16.44■□□□□ 0.22
LSP1-204ENST00000406638 BCO2Q9BYV7 579 aa16.44■□□□□ 0.22
LSP1-204ENST00000406638 GPATCH2LQ9NWQ4 482 aa16.44■□□□□ 0.22
LSP1-204ENST00000406638 IPPQ9Y573 584 aa16.44■□□□□ 0.22
LSP1-204ENST00000406638 CITO14578 2027 aa16.44■□□□□ 0.22
LSP1-204ENST00000406638 HTRA2O43464 458 aaPredicted RBP16.44■□□□□ 0.22
LSP1-204ENST00000406638 MPSTP25325 297 aa16.44■□□□□ 0.22
LSP1-204ENST00000406638 AARS2Q5JTZ9 985 aaKnown RBP16.44■□□□□ 0.22
LSP1-204ENST00000406638 BSPRYQ5W0U4 402 aa16.44■□□□□ 0.22
LSP1-204ENST00000406638 TWF2Q6IBS0 349 aaKnown RBP16.44■□□□□ 0.22
LSP1-204ENST00000406638 CYP2R1Q6VVX0 501 aa16.44■□□□□ 0.22
LSP1-204ENST00000406638 TMEM26Q6ZUK4 368 aa16.44■□□□□ 0.22
LSP1-204ENST00000406638 SLC7A5P1Q8MH63 180 aa16.44■□□□□ 0.22
LSP1-204ENST00000406638 PCDH20Q8N6Y1 951 aaKnown RBP16.44■□□□□ 0.22
LSP1-204ENST00000406638 HM13Q8TCT9 377 aa16.44■□□□□ 0.22
LSP1-204ENST00000406638 ACMSDQ8TDX5 336 aa16.44■□□□□ 0.22
LSP1-204ENST00000406638 TRPC4APQ8TEL6 797 aa16.44■□□□□ 0.22
LSP1-204ENST00000406638 PPWD1Q96BP3 646 aaKnown RBP16.44■□□□□ 0.22
LSP1-204ENST00000406638 ZNF518BQ9C0D4 1074 aa16.44■□□□□ 0.22
LSP1-204ENST00000406638 SRRDQ9UH36 339 aa16.44■□□□□ 0.22
LSP1-204ENST00000406638 VPS28Q9UK41 221 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms