RNA–Protein interactions for RNA: ENST00000406503.1

PRAME-206, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRAME, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-206ENST00000406503 HEPHQ9BQS7 1158 aa13.12□□□□□ -0.31
PRAME-206ENST00000406503 C1QTNF2Q9BXJ5 285 aa13.12□□□□□ -0.31
PRAME-206ENST00000406503 TM6SF2Q9BZW4 377 aa13.12□□□□□ -0.31
PRAME-206ENST00000406503 ZYG11BQ9C0D3 744 aa13.12□□□□□ -0.31
PRAME-206ENST00000406503 TCEAL2Q9H3H9 227 aaPredicted RBP13.12□□□□□ -0.31
PRAME-206ENST00000406503 CPNE5Q9HCH3 593 aa13.12□□□□□ -0.31
PRAME-206ENST00000406503 ATP13A1Q9HD20 1204 aa13.12□□□□□ -0.31
PRAME-206ENST00000406503 ITM2BQ9Y287 266 aa13.12□□□□□ -0.31
PRAME-206ENST00000406503 COL12A1Q99715 3063 aa13.11□□□□□ -0.31
PRAME-206ENST00000406503 FAM72CH0Y354 149 aa13.11□□□□□ -0.31
PRAME-206ENST00000406503 MTIF2P46199 727 aaKnown RBP13.11□□□□□ -0.31
PRAME-206ENST00000406503 LSSP48449 732 aa13.11□□□□□ -0.31
PRAME-206ENST00000406503 PCBP4P57723 403 aaKnown RBP13.11□□□□□ -0.31
PRAME-206ENST00000406503 PFN3P60673 137 aa13.11□□□□□ -0.31
PRAME-206ENST00000406503 HNRNPKP61978 463 aaKnown RBP eCLIP13.11□□□□□ -0.311e-7■■■■□ 20.2
PRAME-206ENST00000406503 SKOR1P84550 965 aa13.11□□□□□ -0.31
PRAME-206ENST00000406503 CCDC15Q0P6D6 951 aa13.11□□□□□ -0.31
PRAME-206ENST00000406503 ISXQ2M1V0 245 aa13.11□□□□□ -0.31
PRAME-206ENST00000406503 FAM72AQ5TYM5 149 aa13.11□□□□□ -0.31
PRAME-206ENST00000406503 TAF3Q5VWG9 929 aa13.11□□□□□ -0.31
PRAME-206ENST00000406503 FAM72DQ6L9T8 149 aa13.11□□□□□ -0.31
PRAME-206ENST00000406503 RETSATQ6NUM9 610 aa13.11□□□□□ -0.31
PRAME-206ENST00000406503 NLRP14Q86W24 1093 aa13.11□□□□□ -0.31
PRAME-206ENST00000406503 PARGQ86W56 976 aa13.11□□□□□ -0.31
PRAME-206ENST00000406503 FAM72BQ86X60 149 aa13.11□□□□□ -0.31
PRAME-206ENST00000406503 DCP2Q8IU60 420 aaKnown RBP13.11□□□□□ -0.31
PRAME-206ENST00000406503 DRC7Q8IY82 874 aa13.11□□□□□ -0.31
PRAME-206ENST00000406503 RBFAQ8N0V3 343 aa13.11□□□□□ -0.31
PRAME-206ENST00000406503 EMC1Q8N766 993 aa13.11□□□□□ -0.31
PRAME-206ENST00000406503 OR6K2Q8NGY2 324 aa13.11□□□□□ -0.31
PRAME-206ENST00000406503 FAM174AQ8TBP5 190 aa13.11□□□□□ -0.31
PRAME-206ENST00000406503 PPP1R16AQ96I34 528 aa13.11□□□□□ -0.31
PRAME-206ENST00000406503 LENG8Q96PV6 779 aaPredicted RBP13.11□□□□□ -0.31
PRAME-206ENST00000406503 DEPDC7Q96QD5 511 aa13.11□□□□□ -0.31
PRAME-206ENST00000406503 LGMNQ99538 433 aa13.11□□□□□ -0.31
PRAME-206ENST00000406503 SPON2Q9BUD6 331 aa13.11□□□□□ -0.31
PRAME-206ENST00000406503 SEMA4CQ9C0C4 833 aa13.11□□□□□ -0.31
PRAME-206ENST00000406503 OSBPL2Q9H1P3 480 aa13.11□□□□□ -0.31
PRAME-206ENST00000406503 NDST4Q9H3R1 872 aa13.11□□□□□ -0.31
PRAME-206ENST00000406503 ZDHHC6Q9H6R6 413 aa13.11□□□□□ -0.31
PRAME-206ENST00000406503 PPARGC1AQ9UBK2 798 aaKnown RBP13.11□□□□□ -0.31
PRAME-206ENST00000406503 ENTPD2Q9Y5L3 495 aa13.11□□□□□ -0.31
PRAME-206ENST00000406503 IGLON5A6NGN9 336 aa13.1□□□□□ -0.31
PRAME-206ENST00000406503 C16orf96A6NNT2 1141 aa13.1□□□□□ -0.31
PRAME-206ENST00000406503 GOLGA8SH3BPF8 625 aa13.1□□□□□ -0.31
PRAME-206ENST00000406503 GCATO75600 419 aa13.1□□□□□ -0.31
PRAME-206ENST00000406503 MMEP08473 750 aa13.1□□□□□ -0.31
PRAME-206ENST00000406503 ALPPL2P10696 532 aa13.1□□□□□ -0.31
PRAME-206ENST00000406503 IGFALSP35858 605 aa13.1□□□□□ -0.31
PRAME-206ENST00000406503 PDX1P52945 283 aa13.1□□□□□ -0.31
PRAME-206ENST00000406503 SNX16P57768 344 aa13.1□□□□□ -0.31
PRAME-206ENST00000406503 NRG1Q02297 640 aaPredicted RBP13.1□□□□□ -0.31
PRAME-206ENST00000406503 SLC20A2Q08357 652 aa13.1□□□□□ -0.31
PRAME-206ENST00000406503 RAPGEF1Q13905 1077 aa13.1□□□□□ -0.31
PRAME-206ENST00000406503 PDE1CQ14123 709 aaPredicted RBP13.1□□□□□ -0.31
PRAME-206ENST00000406503 CDKN3Q16667 212 aa13.1□□□□□ -0.31
PRAME-206ENST00000406503 C15orf59Q2T9L4 293 aaPredicted RBP13.1□□□□□ -0.31
PRAME-206ENST00000406503 DEFB133Q30KQ1 61 aa13.1□□□□□ -0.31
PRAME-206ENST00000406503 VWA3BQ502W6 1294 aa13.1□□□□□ -0.31
PRAME-206ENST00000406503 HSP90AA4PQ58FG1 418 aa13.1□□□□□ -0.31
PRAME-206ENST00000406503 PERM1Q5SV97 790 aa13.1□□□□□ -0.31
PRAME-206ENST00000406503 KLHDC7AQ5VTJ3 777 aa13.1□□□□□ -0.31
PRAME-206ENST00000406503 ZCCHC8Q6NZY4 707 aaKnown RBP13.1□□□□□ -0.31
PRAME-206ENST00000406503 ARCQ7LC44 396 aa13.1□□□□□ -0.31
PRAME-206ENST00000406503 PLPP6Q8IY26 295 aa13.1□□□□□ -0.31
PRAME-206ENST00000406503 MAPK15Q8TD08 544 aa13.1□□□□□ -0.31
PRAME-206ENST00000406503 EPS8L1Q8TE68 723 aa13.1□□□□□ -0.31
PRAME-206ENST00000406503 ARHGEF2Q92974 986 aaKnown RBP13.1□□□□□ -0.31
PRAME-206ENST00000406503 ISG20Q96AZ6 181 aaKnown RBP13.1□□□□□ -0.31
PRAME-206ENST00000406503 FEM1CQ96JP0 617 aa13.1□□□□□ -0.31
PRAME-206ENST00000406503 DUSP23Q9BVJ7 150 aa13.1□□□□□ -0.31
PRAME-206ENST00000406503 POLR1BQ9H9Y6 1135 aa13.1□□□□□ -0.31
PRAME-206ENST00000406503 USP29Q9HBJ7 922 aa13.1□□□□□ -0.31
PRAME-206ENST00000406503 METTL5Q9NRN9 209 aaKnown RBP13.1□□□□□ -0.31
PRAME-206ENST00000406503 SATB2Q9UPW6 733 aa13.1□□□□□ -0.31
PRAME-206ENST00000406503 CSNK1G3Q9Y6M4 447 aa13.1□□□□□ -0.31
PRAME-206ENST00000406503 EME2A4GXA9 379 aaPredicted RBP13.09□□□□□ -0.31
PRAME-206ENST00000406503 NEMP2A6NFY4 417 aa13.09□□□□□ -0.31
PRAME-206ENST00000406503 AREL1O15033 823 aa13.09□□□□□ -0.31
PRAME-206ENST00000406503 AQP9O43315 295 aa13.09□□□□□ -0.31
PRAME-206ENST00000406503 GJB6O95452 261 aa13.09□□□□□ -0.31
PRAME-206ENST00000406503 RECQLP46063 649 aaPredicted RBP13.09□□□□□ -0.31
PRAME-206ENST00000406503 RABIFP47224 123 aa13.09□□□□□ -0.31
PRAME-206ENST00000406503 DNA2P51530 1060 aa13.09□□□□□ -0.31
PRAME-206ENST00000406503 BPIFB4P59827 614 aa13.09□□□□□ -0.31
PRAME-206ENST00000406503 ERVPABLB-1P60509 514 aa13.09□□□□□ -0.31
PRAME-206ENST00000406503 ATP11AP98196 1134 aa13.09□□□□□ -0.31
PRAME-206ENST00000406503 BECN1Q14457 450 aa13.09□□□□□ -0.31
PRAME-206ENST00000406503 HS1BP3Q53T59 392 aa13.09□□□□□ -0.31
PRAME-206ENST00000406503 LRRC73Q5JTD7 316 aa13.09□□□□□ -0.31
PRAME-206ENST00000406503 ACBD5Q5T8D3 534 aaPredicted RBP13.09□□□□□ -0.31
PRAME-206ENST00000406503 NAA35Q5VZE5 725 aa13.09□□□□□ -0.31
PRAME-206ENST00000406503 IGF2-ASQ6U949 168 aa13.09□□□□□ -0.31
PRAME-206ENST00000406503 CRTC1Q6UUV9 634 aa13.09□□□□□ -0.31
PRAME-206ENST00000406503 NYAP1Q6ZVC0 841 aa13.09□□□□□ -0.31
PRAME-206ENST00000406503 EFL1Q7Z2Z2 1120 aaKnown RBP13.09□□□□□ -0.31
PRAME-206ENST00000406503 DENND6BQ8NEG7 585 aa13.09□□□□□ -0.31
PRAME-206ENST00000406503 JOSD2Q8TAC2 188 aa13.09□□□□□ -0.31
PRAME-206ENST00000406503 SLC20A1Q8WUM9 679 aa13.09□□□□□ -0.31
PRAME-206ENST00000406503 ASB12Q8WXK4 309 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms