RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 CCDC191Q8NCU4 936 aa5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 FAM110DQ8TAY7 271 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 INTS12Q96CB8 462 aaKnown RBP5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 MAP7D2Q96T17 732 aa5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 EFHD1Q9BUP0 239 aa5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 GATA5Q9BWX5 397 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 STRA6Q9BX79 667 aa5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 TXNRD2Q9NNW7 524 aa5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 ZCCHC17Q9NP64 241 aaKnown RBP5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 TFCP2L1Q9NZI6 479 aa5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 EHD2Q9NZN4 543 aa5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 KLHL13Q9P2N7 655 aa5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 RNF7Q9UBF6 113 aa5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 PEMTQ9UBM1 199 aa5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 UPB1Q9UBR1 384 aa5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 SLC25A13Q9UJS0 675 aa5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 DTX4Q9Y2E6 619 aa5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 ADAM18Q9Y3Q7 739 aa5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 SIRT4Q9Y6E7 314 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 SPATA31A5Q5VU36 1347 aa5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 SPATA31A7Q8IWB4 1347 aa5.23□□□□□ -1.57
HMGB1P13-201ENST00000406019 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P13-201ENST00000406019 TAF4O00268 1085 aa5.22□□□□□ -1.57
HMGB1P13-201ENST00000406019 HBP1O60381 514 aa5.22□□□□□ -1.57
HMGB1P13-201ENST00000406019 RARGP13631 454 aa5.22□□□□□ -1.57
HMGB1P13-201ENST00000406019 TGM2P21980 687 aa5.22□□□□□ -1.57
HMGB1P13-201ENST00000406019 ATP5F1P24539 256 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P13-201ENST00000406019 GSTM2P28161 218 aa5.22□□□□□ -1.57
HMGB1P13-201ENST00000406019 TYK2P29597 1187 aa5.22□□□□□ -1.57
HMGB1P13-201ENST00000406019 NNMTP40261 264 aa5.22□□□□□ -1.57
HMGB1P13-201ENST00000406019 CPA2P48052 419 aa5.22□□□□□ -1.57
HMGB1P13-201ENST00000406019 CTCFP49711 727 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P13-201ENST00000406019 SNX16P57768 344 aa5.22□□□□□ -1.57
HMGB1P13-201ENST00000406019 CFHR1Q03591 330 aa5.22□□□□□ -1.57
HMGB1P13-201ENST00000406019 SLC14A1Q13336 389 aa5.22□□□□□ -1.57
HMGB1P13-201ENST00000406019 IRF3Q14653 427 aa5.22□□□□□ -1.57
HMGB1P13-201ENST00000406019 MFSD13AQ14CX5 517 aa5.22□□□□□ -1.57
HMGB1P13-201ENST00000406019 CERKLQ49MI3 558 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P13-201ENST00000406019 FBXO43Q4G163 708 aa5.22□□□□□ -1.57
HMGB1P13-201ENST00000406019 AADACL2Q6P093 401 aa5.22□□□□□ -1.57
HMGB1P13-201ENST00000406019 C11orf65Q8NCR3 313 aa5.22□□□□□ -1.57
HMGB1P13-201ENST00000406019 NEK9Q8TD19 979 aa5.22□□□□□ -1.57
HMGB1P13-201ENST00000406019 WIPF2Q8TF74 440 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P13-201ENST00000406019 SCARB1Q8WTV0 552 aa5.22□□□□□ -1.57
HMGB1P13-201ENST00000406019 MAP4K1Q92918 833 aa5.22□□□□□ -1.57
HMGB1P13-201ENST00000406019 FAM149B1Q96BN6 582 aa5.22□□□□□ -1.57
HMGB1P13-201ENST00000406019 P2RY11Q96G91 374 aa5.22□□□□□ -1.57
HMGB1P13-201ENST00000406019 CCDC17Q96LX7 622 aa5.22□□□□□ -1.57
HMGB1P13-201ENST00000406019 YME1L1Q96TA2 773 aa5.22□□□□□ -1.57
HMGB1P13-201ENST00000406019 BAG1Q99933 345 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P13-201ENST00000406019 IL1RAPL1Q9NZN1 696 aa5.22□□□□□ -1.57
HMGB1P13-201ENST00000406019 CFDP1Q9UEE9 299 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P13-201ENST00000406019 CLDN16Q9Y5I7 305 aa5.22□□□□□ -1.57
HMGB1P13-201ENST00000406019 CAPN7Q9Y6W3 813 aa5.22□□□□□ -1.57
HMGB1P13-201ENST00000406019 FAM237BA0A1B0GVD1 139 aa5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 FRMD3A2A2Y4 597 aa5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 PABPN1LA6NDY0 278 aaKnown RBP5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 A8MZ25 164 aa5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 MYO1GB0I1T2 1018 aa5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 H7C0S8 307 aa5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 CLIC1O00299 241 aa5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 CEP104O60308 925 aa5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 PAGE4O60829 102 aa5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 TACC1O75410 805 aa5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 GCATO75600 419 aa5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 GALTP07902 379 aa5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 ZNF8P17098 575 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 CD72P21854 359 aa5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 ARHGAP25P42331 645 aa5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 EFNA5P52803 228 aa5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 CDC16Q13042 620 aa5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 KCNB1Q14721 858 aa5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 CRYMQ14894 314 aa5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 RPE65Q16518 533 aa5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 GLE1Q53GS7 698 aaKnown RBP5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 KLHL35Q6PF15 583 aa5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 SLC30A9Q6PML9 568 aa5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 SLC46A3Q7Z3Q1 461 aa5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 TAGAPQ8N103 731 aa5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 CPXM2Q8N436 756 aa5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 CADM4Q8NFZ8 388 aa5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 HSPH1Q92598 858 aa5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 COQ8BQ96D53 544 aa5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 RADILQ96JH8 1075 aa5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 NAP1L5Q96NT1 182 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 GLIS2Q9BZE0 524 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 FTOQ9C0B1 505 aaKnown RBP eCLIP5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 ALDH8A1Q9H2A2 487 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 SLC32A1Q9H598 525 aa5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 Q9N2J8 555 aa5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 C20orf141Q9NUB4 165 aa5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 SPATS2LQ9NUQ6 558 aaKnown RBP5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 ASNSD1Q9NWL6 643 aa5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 NCKIPSDQ9NZQ3 722 aa5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 MORF4L1Q9UBU8 362 aa5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 INTS6Q9UL03 887 aaKnown RBP5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 ZNF711Q9Y462 761 aa5.21□□□□□ -1.58
HMGB1P13-201ENST00000406019 SH2B2O14492 632 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P13-201ENST00000406019 CLTBP09497 229 aa5.2□□□□□ -1.58
HMGB1P13-201ENST00000406019 LMO1P25800 156 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms