RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 FAR2Q96K12 515 aa10.87□□□□□ -0.67
CLIP4-204ENST00000404424 PPP1R36Q96LQ0 422 aa10.87□□□□□ -0.67
CLIP4-204ENST00000404424 GPR78Q96P69 363 aa10.87□□□□□ -0.67
CLIP4-204ENST00000404424 TSPYL2Q9H2G4 693 aaPredicted RBP10.87□□□□□ -0.67
CLIP4-204ENST00000404424 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.87□□□□□ -0.67
CLIP4-204ENST00000404424 CNOT11Q9UKZ1 510 aaKnown RBP10.87□□□□□ -0.67
CLIP4-204ENST00000404424 PRSS51A0A1B0GVH4 220 aa10.87□□□□□ -0.67
CLIP4-204ENST00000404424 ANKRD33BA6NCL7 494 aa10.87□□□□□ -0.67
CLIP4-204ENST00000404424 HHLA1C9JL84 531 aa10.87□□□□□ -0.67
CLIP4-204ENST00000404424 PDHXO00330 501 aa10.87□□□□□ -0.67
CLIP4-204ENST00000404424 CFLARO15519 480 aa10.87□□□□□ -0.67
CLIP4-204ENST00000404424 DYNC1LI2O43237 492 aaPredicted RBP10.87□□□□□ -0.67
CLIP4-204ENST00000404424 HTR7P34969 479 aa10.87□□□□□ -0.67
CLIP4-204ENST00000404424 AVPR1AP37288 418 aa10.87□□□□□ -0.67
CLIP4-204ENST00000404424 CCR10P46092 362 aa10.87□□□□□ -0.67
CLIP4-204ENST00000404424 RPL5P46777 297 aaKnown RBP10.87□□□□□ -0.67
CLIP4-204ENST00000404424 ARCN1P48444 511 aaKnown RBP10.87□□□□□ -0.67
CLIP4-204ENST00000404424 GEMP55040 296 aa10.87□□□□□ -0.67
CLIP4-204ENST00000404424 LSAMPQ13449 338 aa10.87□□□□□ -0.67
CLIP4-204ENST00000404424 CEACAM7Q14002 265 aa10.87□□□□□ -0.67
CLIP4-204ENST00000404424 MFSD10Q14728 455 aa10.87□□□□□ -0.67
CLIP4-204ENST00000404424 OTOP3Q7RTS5 596 aa10.87□□□□□ -0.67
CLIP4-204ENST00000404424 SCML4Q8N228 414 aa10.87□□□□□ -0.67
CLIP4-204ENST00000404424 AFAP1L2Q8N4X5 818 aa10.87□□□□□ -0.67
CLIP4-204ENST00000404424 LZTR1Q8N653 840 aa10.87□□□□□ -0.67
CLIP4-204ENST00000404424 ZC3H15Q8WU90 426 aaKnown RBP10.87□□□□□ -0.67
CLIP4-204ENST00000404424 NXNL1Q96CM4 212 aa10.87□□□□□ -0.67
CLIP4-204ENST00000404424 DGCR14Q96DF8 476 aaKnown RBP10.87□□□□□ -0.67
CLIP4-204ENST00000404424 SLC10A4Q96EP9 437 aa10.87□□□□□ -0.67
CLIP4-204ENST00000404424 SMARCD1Q96GM5 515 aa10.87□□□□□ -0.67
CLIP4-204ENST00000404424 ENTPD7Q9NQZ7 604 aa10.87□□□□□ -0.67
CLIP4-204ENST00000404424 HACD3Q9P035 362 aa10.87□□□□□ -0.67
CLIP4-204ENST00000404424 EPS15L1Q9UBC2 864 aa10.87□□□□□ -0.67
CLIP4-204ENST00000404424 PACSIN3Q9UKS6 424 aa10.87□□□□□ -0.67
CLIP4-204ENST00000404424 G3BP2Q9UN86 482 aaKnown RBP10.87□□□□□ -0.67
CLIP4-204ENST00000404424 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.87□□□□□ -0.67
CLIP4-204ENST00000404424 COPG1Q9Y678 874 aaKnown RBP10.87□□□□□ -0.67
CLIP4-204ENST00000404424 MYBPHLA2RUH7 354 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 TNFAIP8O95379 198 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 CD1EP15812 388 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 ATP5F1P24539 256 aaPredicted RBP10.86□□□□□ -0.67
CLIP4-204ENST00000404424 PMLP29590 882 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 RGS2P41220 211 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 PSMD8P48556 350 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 MS4A2Q01362 244 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 POU4F1Q01851 419 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 IRF5Q13568 498 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 PPP2R5DQ14738 602 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 MAPRE2Q15555 327 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 TWF2Q6IBS0 349 aaKnown RBP10.86□□□□□ -0.67
CLIP4-204ENST00000404424 BHLHA9Q7RTU4 235 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 AHI1Q8N157 1196 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 C2CD4AQ8NCU7 369 aaPredicted RBP10.86□□□□□ -0.67
CLIP4-204ENST00000404424 BHLHE22Q8NFJ8 381 aaPredicted RBP10.86□□□□□ -0.67
CLIP4-204ENST00000404424 CCDC126Q96EE4 140 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 MOCOSQ96EN8 888 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 DTNBP1Q96EV8 351 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 CELF6Q96J87 481 aaKnown RBP10.86□□□□□ -0.67
CLIP4-204ENST00000404424 ZFRQ96KR1 1074 aaKnown RBP10.86□□□□□ -0.67
CLIP4-204ENST00000404424 TRIM62Q9BVG3 475 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 MRPL1Q9BYD6 325 aaKnown RBP10.86□□□□□ -0.67
CLIP4-204ENST00000404424 GLOD4Q9HC38 313 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 CSNK1G1Q9HCP0 422 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 CLIC5Q9NZA1 410 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 TCAF1Q9Y4C2 921 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 FNDC1Q4ZHG4 1894 aaPredicted RBP10.86□□□□□ -0.67
CLIP4-204ENST00000404424 TCAF2A6NFQ2 919 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 TRIM38O00635 465 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 ACOT8O14734 319 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 VAPBO95292 243 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 PGK1P00558 417 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 SMIM18P0DKX4 95 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 PCSK1P29120 753 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 CD151P48509 253 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 STX5Q13190 355 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 PDCD2Q16342 344 aaPredicted RBP10.86□□□□□ -0.67
CLIP4-204ENST00000404424 TMEM198Q66K66 360 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 KIAA0408Q6ZU52 694 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 USP50Q70EL3 339 aaPredicted RBP10.86□□□□□ -0.67
CLIP4-204ENST00000404424 BEND5Q7L4P6 421 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 CEP97Q8IW35 865 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 DENND6AQ8IWF6 608 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 ATPAF2Q8N5M1 289 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 GABPB2Q8TAK5 448 aaPredicted RBP10.86□□□□□ -0.67
CLIP4-204ENST00000404424 EDEM1Q92611 657 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 RNF34Q969K3 372 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 TOP1MTQ969P6 601 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 IL12RB2Q99665 862 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 MRPS26Q9BYN8 205 aaKnown RBP10.86□□□□□ -0.67
CLIP4-204ENST00000404424 PRKD2Q9BZL6 878 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 COPS7BQ9H9Q2 264 aaPredicted RBP10.86□□□□□ -0.67
CLIP4-204ENST00000404424 SNX10Q9Y5X0 201 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 AP4B1Q9Y6B7 739 aa10.86□□□□□ -0.67
CLIP4-204ENST00000404424 H0YJX3 145 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 HAS3O00219 553 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 SDHDO14521 159 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 MATN3O15232 486 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 TREHO43280 583 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 CRTAMO95727 393 aa10.85□□□□□ -0.67
CLIP4-204ENST00000404424 CLPTM1O96005 669 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms