RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 FBXO39Q8N4B4 442 aa12.13□□□□□ -0.47
SPTLC1P3-201ENST00000403408 OR7D4Q8NG98 312 aa12.13□□□□□ -0.47
SPTLC1P3-201ENST00000403408 TPCN2Q8NHX9 752 aa12.13□□□□□ -0.47
SPTLC1P3-201ENST00000403408 STK32AQ8WU08 396 aa12.13□□□□□ -0.47
SPTLC1P3-201ENST00000403408 FUBP1Q96AE4 644 aaKnown RBP12.13□□□□□ -0.47
SPTLC1P3-201ENST00000403408 NT5C1BQ96P26 610 aa12.13□□□□□ -0.47
SPTLC1P3-201ENST00000403408 LENG8Q96PV6 779 aaPredicted RBP12.13□□□□□ -0.47
SPTLC1P3-201ENST00000403408 IL12RB2Q99665 862 aa12.13□□□□□ -0.47
SPTLC1P3-201ENST00000403408 MUC3BQ9H195 1237 aa12.13□□□□□ -0.47
SPTLC1P3-201ENST00000403408 FAM204AQ9H8W3 233 aa12.13□□□□□ -0.47
SPTLC1P3-201ENST00000403408 EPB41L5Q9HCM4 733 aa12.13□□□□□ -0.47
SPTLC1P3-201ENST00000403408 FOXJ2Q9P0K8 574 aa12.13□□□□□ -0.47
SPTLC1P3-201ENST00000403408 ZNF212Q9UDV6 495 aa12.13□□□□□ -0.47
SPTLC1P3-201ENST00000403408 IL36AQ9UHA7 158 aa12.13□□□□□ -0.47
SPTLC1P3-201ENST00000403408 PADI4Q9UM07 663 aa12.13□□□□□ -0.47
SPTLC1P3-201ENST00000403408 CACNA1DQ01668 2161 aa12.12□□□□□ -0.47
SPTLC1P3-201ENST00000403408 CLDN11O75508 207 aa12.12□□□□□ -0.47
SPTLC1P3-201ENST00000403408 PRNPP04156 253 aa12.12□□□□□ -0.47
SPTLC1P3-201ENST00000403408 ITIH2P19823 946 aa12.12□□□□□ -0.47
SPTLC1P3-201ENST00000403408 L1CAMP32004 1257 aa12.12□□□□□ -0.47
SPTLC1P3-201ENST00000403408 CCR1P32246 355 aa12.12□□□□□ -0.47
SPTLC1P3-201ENST00000403408 NEK3P51956 506 aa12.12□□□□□ -0.47
SPTLC1P3-201ENST00000403408 OXCT1P55809 520 aa12.12□□□□□ -0.47
SPTLC1P3-201ENST00000403408 UBAP2LQ14157 1087 aaKnown RBP12.12□□□□□ -0.47
SPTLC1P3-201ENST00000403408 SPIDRQ14159 915 aa12.12□□□□□ -0.47
SPTLC1P3-201ENST00000403408 IGFBP7Q16270 282 aa12.12□□□□□ -0.47
SPTLC1P3-201ENST00000403408 HIST2H2BCQ6DN03 193 aa12.12□□□□□ -0.47
SPTLC1P3-201ENST00000403408 KIAA1161Q6NSJ0 714 aa12.12□□□□□ -0.47
SPTLC1P3-201ENST00000403408 JAMLQ86YT9 394 aa12.12□□□□□ -0.47
SPTLC1P3-201ENST00000403408 PHACTR4Q8IZ21 702 aa12.12□□□□□ -0.47
SPTLC1P3-201ENST00000403408 SDR16C5Q8N3Y7 309 aa12.12□□□□□ -0.47
SPTLC1P3-201ENST00000403408 KYQ8NBH2 561 aa12.12□□□□□ -0.47
SPTLC1P3-201ENST00000403408 CCDC74AQ96AQ1 378 aa12.12□□□□□ -0.47
SPTLC1P3-201ENST00000403408 CENPTQ96BT3 561 aa12.12□□□□□ -0.47
SPTLC1P3-201ENST00000403408 CPXM1Q96SM3 734 aa12.12□□□□□ -0.47
SPTLC1P3-201ENST00000403408 THAP9Q9H5L6 903 aa12.12□□□□□ -0.47
SPTLC1P3-201ENST00000403408 SYNDIG1Q9H7V2 258 aa12.12□□□□□ -0.47
SPTLC1P3-201ENST00000403408 METTL14Q9HCE5 456 aaKnown RBP12.12□□□□□ -0.47
SPTLC1P3-201ENST00000403408 MBNL1Q9NR56 388 aaKnown RBP12.12□□□□□ -0.47
SPTLC1P3-201ENST00000403408 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.12□□□□□ -0.47
SPTLC1P3-201ENST00000403408 MPP6Q9NZW5 540 aa12.12□□□□□ -0.47
SPTLC1P3-201ENST00000403408 PISDQ9UG56 409 aa12.12□□□□□ -0.47
SPTLC1P3-201ENST00000403408 APOBEC3BQ9UH17 382 aaKnown RBP12.12□□□□□ -0.47
SPTLC1P3-201ENST00000403408 PRAMEF33A0A0G2JMD5 474 aa12.11□□□□□ -0.47
SPTLC1P3-201ENST00000403408 C9orf172C9J069 976 aa12.11□□□□□ -0.47
SPTLC1P3-201ENST00000403408 D6RAR5 112 aa12.11□□□□□ -0.47
SPTLC1P3-201ENST00000403408 H3BM21 787 aa12.11□□□□□ -0.47
SPTLC1P3-201ENST00000403408 PMM2O15305 246 aa12.11□□□□□ -0.47
SPTLC1P3-201ENST00000403408 SART1O43290 800 aaKnown RBP12.11□□□□□ -0.47
SPTLC1P3-201ENST00000403408 AP1G1O43747 822 aa12.11□□□□□ -0.47
SPTLC1P3-201ENST00000403408 PRAMEF10O60809 474 aa12.11□□□□□ -0.47
SPTLC1P3-201ENST00000403408 RHOCP08134 193 aa12.11□□□□□ -0.47
SPTLC1P3-201ENST00000403408 CR2P20023 1033 aa12.11□□□□□ -0.47
SPTLC1P3-201ENST00000403408 ITGB7P26010 798 aa12.11□□□□□ -0.47
SPTLC1P3-201ENST00000403408 ACADSBP45954 432 aa12.11□□□□□ -0.47
SPTLC1P3-201ENST00000403408 ARSDP51689 593 aa12.11□□□□□ -0.47
SPTLC1P3-201ENST00000403408 CDH4P55283 916 aa12.11□□□□□ -0.47
SPTLC1P3-201ENST00000403408 CDK17Q00537 523 aa12.11□□□□□ -0.47
SPTLC1P3-201ENST00000403408 PDCLQ13371 301 aa12.11□□□□□ -0.47
SPTLC1P3-201ENST00000403408 PNOCQ13519 176 aa12.11□□□□□ -0.47
SPTLC1P3-201ENST00000403408 SKIDA1Q1XH10 827 aa12.11□□□□□ -0.47
SPTLC1P3-201ENST00000403408 ATL3Q6DD88 541 aa12.11□□□□□ -0.47
SPTLC1P3-201ENST00000403408 XKR5Q6UX68 686 aa12.11□□□□□ -0.47
SPTLC1P3-201ENST00000403408 DTX1Q86Y01 620 aa12.11□□□□□ -0.47
SPTLC1P3-201ENST00000403408 PTRH1Q86Y79 214 aaKnown RBP12.11□□□□□ -0.47
SPTLC1P3-201ENST00000403408 FAM174AQ8TBP5 190 aa12.11□□□□□ -0.47
SPTLC1P3-201ENST00000403408 ZNF606Q8WXB4 792 aa12.11□□□□□ -0.47
SPTLC1P3-201ENST00000403408 FEM1CQ96JP0 617 aa12.11□□□□□ -0.47
SPTLC1P3-201ENST00000403408 SIK2Q9H0K1 926 aa12.11□□□□□ -0.47
SPTLC1P3-201ENST00000403408 EPN3Q9H201 632 aa12.11□□□□□ -0.47
SPTLC1P3-201ENST00000403408 DYRK4Q9NR20 520 aa12.11□□□□□ -0.47
SPTLC1P3-201ENST00000403408 PIGVQ9NUD9 493 aa12.11□□□□□ -0.47
SPTLC1P3-201ENST00000403408 EVA1BQ9NVM1 165 aa12.11□□□□□ -0.47
SPTLC1P3-201ENST00000403408 NCKIPSDQ9NZQ3 722 aa12.11□□□□□ -0.47
SPTLC1P3-201ENST00000403408 SIRPGQ9P1W8 387 aa12.11□□□□□ -0.47
SPTLC1P3-201ENST00000403408 SPASTQ9UBP0 616 aa12.11□□□□□ -0.47
SPTLC1P3-201ENST00000403408 ARMCX3Q9UH62 379 aaPredicted RBP12.11□□□□□ -0.47
SPTLC1P3-201ENST00000403408 IPO11Q9UI26 975 aaKnown RBP12.11□□□□□ -0.47
SPTLC1P3-201ENST00000403408 FCF1Q9Y324 198 aaKnown RBP12.11□□□□□ -0.47
SPTLC1P3-201ENST00000403408 ZDHHC9Q9Y397 364 aa12.11□□□□□ -0.47
SPTLC1P3-201ENST00000403408 ABCA12Q86UK0 2595 aa12.11□□□□□ -0.47
SPTLC1P3-201ENST00000403408 DRGXA6NNA5 263 aa12.1□□□□□ -0.47
SPTLC1P3-201ENST00000403408 FPGTO14772 594 aa12.1□□□□□ -0.47
SPTLC1P3-201ENST00000403408 LIPCP11150 499 aa12.1□□□□□ -0.47
SPTLC1P3-201ENST00000403408 GP1BBP13224 206 aa12.1□□□□□ -0.47
SPTLC1P3-201ENST00000403408 CCNHP51946 323 aaPredicted RBP12.1□□□□□ -0.47
SPTLC1P3-201ENST00000403408 INHBCP55103 352 aa12.1□□□□□ -0.47
SPTLC1P3-201ENST00000403408 ARF5P84085 180 aa12.1□□□□□ -0.47
SPTLC1P3-201ENST00000403408 FKBP3Q00688 224 aaKnown RBP12.1□□□□□ -0.47
SPTLC1P3-201ENST00000403408 ZFP36L1Q07352 338 aaKnown RBP12.1□□□□□ -0.47
SPTLC1P3-201ENST00000403408 NME3Q13232 169 aa12.1□□□□□ -0.47
SPTLC1P3-201ENST00000403408 LRRC73Q5JTD7 316 aa12.1□□□□□ -0.47
SPTLC1P3-201ENST00000403408 OLFML1Q6UWY5 402 aa12.1□□□□□ -0.47
SPTLC1P3-201ENST00000403408 FAM183BPQ6ZVS7 135 aa12.1□□□□□ -0.47
SPTLC1P3-201ENST00000403408 TFAP2DQ7Z6R9 452 aa12.1□□□□□ -0.47
SPTLC1P3-201ENST00000403408 DCAF4L2Q8NA75 395 aa12.1□□□□□ -0.47
SPTLC1P3-201ENST00000403408 OR6K2Q8NGY2 324 aa12.1□□□□□ -0.47
SPTLC1P3-201ENST00000403408 NAT6Q93015 286 aa12.1□□□□□ -0.47
SPTLC1P3-201ENST00000403408 RNF34Q969K3 372 aa12.1□□□□□ -0.47
SPTLC1P3-201ENST00000403408 PMEPA1Q969W9 287 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms