RNA–Protein interactions for RNA: ENST00000403303.5

CCDC178-204, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-204ENST00000403303 TMEM59LQ9UK28 342 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 SLC5A6Q9Y289 635 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 LYVE1Q9Y5Y7 322 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 WDR90Q96KV7 1748 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 ECM29Q5VYK3 1845 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 MEGF6O75095 1541 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 PLK4O00444 970 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 CYP26A1O43174 497 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 LARGE1O95461 756 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 HNRNPCP07910 306 aaKnown RBP eCLIP3.91□□□□□ -1.78
CCDC178-204ENST00000403303 HOXB4P17483 251 aaPredicted RBP3.91□□□□□ -1.78
CCDC178-204ENST00000403303 ANXA7P20073 488 aaKnown RBP3.91□□□□□ -1.78
CCDC178-204ENST00000403303 GABRA5P31644 462 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 GRK5P34947 590 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 SUOXP51687 545 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 NUCB2P80303 420 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 PPATQ06203 517 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 CAMK1Q14012 370 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 ZKSCAN8Q15776 578 aaPredicted RBP3.91□□□□□ -1.78
CCDC178-204ENST00000403303 PABPC1LQ4VXU2 614 aaKnown RBP3.91□□□□□ -1.78
CCDC178-204ENST00000403303 KRTCAP3Q53RY4 240 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 ANKRD16Q6P6B7 361 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 NOXA1Q86UR1 476 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 TRIM48Q8IWZ4 208 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 CAMKVQ8NCB2 501 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 ANKRD20A12PQ8NF67 263 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 SMARCC2Q8TAQ2 1214 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 SHKBP1Q8TBC3 707 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 RSAD2Q8WXG1 361 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 ATOH1Q92858 354 aaPredicted RBP3.91□□□□□ -1.78
CCDC178-204ENST00000403303 FAM167AQ96KS9 214 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 TTC25Q96NG3 672 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 TEX101Q9BY14 249 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 SLC35C2Q9NQQ7 365 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.91□□□□□ -1.78
CCDC178-204ENST00000403303 TBCCD1Q9NVR7 557 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 PRR13Q9NZ81 148 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 HESX1Q9UBX0 185 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 HOOK1Q9UJC3 728 aaKnown RBP3.91□□□□□ -1.78
CCDC178-204ENST00000403303 ANGEL1Q9UNK9 670 aaKnown RBP3.91□□□□□ -1.78
CCDC178-204ENST00000403303 V9GYY5 206 aaPredicted RBP3.91□□□□□ -1.78
CCDC178-204ENST00000403303 IGSF1Q8N6C5 1336 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 MYH14Q7Z406 1995 aaKnown RBP3.91□□□□□ -1.78
CCDC178-204ENST00000403303 GMNNO75496 209 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 CCDC175P0C221 793 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 FAM58BPP0C7Q3 252 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 TOP1P11387 765 aaKnown RBP3.91□□□□□ -1.78
CCDC178-204ENST00000403303 FUT4P22083 530 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 FPR3P25089 353 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 CHRNA3P32297 505 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 CAPZA1P52907 286 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 ARFIP1P53367 373 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 RAD23AP54725 363 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 OASLQ15646 514 aaKnown RBP3.91□□□□□ -1.78
CCDC178-204ENST00000403303 KCTD21Q4G0X4 260 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 USP39Q53GS9 565 aaKnown RBP3.91□□□□□ -1.78
CCDC178-204ENST00000403303 CFAP52Q8N1V2 620 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 DPP10Q8N608 796 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 SETD6Q8TBK2 473 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 ZNF653Q96CK0 615 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 ORAI1Q96D31 301 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 TRIM44Q96DX7 344 aaPredicted RBP3.91□□□□□ -1.78
CCDC178-204ENST00000403303 BSCL2Q96G97 398 aaPredicted RBP3.91□□□□□ -1.78
CCDC178-204ENST00000403303 C16orf58Q96GQ5 468 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 CTAGE1Q96RT6 745 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 RBM15Q96T37 977 aaKnown RBP eCLIP3.91□□□□□ -1.78
CCDC178-204ENST00000403303 ELOVL1Q9BW60 279 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 TNMDQ9H2S6 317 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 CNOT10Q9H9A5 744 aaKnown RBP3.91□□□□□ -1.78
CCDC178-204ENST00000403303 NDUFAF4Q9P032 175 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 SUCLA2Q9P2R7 463 aaPredicted RBP3.91□□□□□ -1.78
CCDC178-204ENST00000403303 HEY2Q9UBP5 337 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 PCDHGA5Q9Y5G8 931 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 PCDHGA1Q9Y5H4 931 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 ATRNL1Q5VV63 1379 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 USP47Q96K76 1375 aa3.91□□□□□ -1.78
CCDC178-204ENST00000403303 A0A1W2PQ45 241 aaPredicted RBP3.9□□□□□ -1.78
CCDC178-204ENST00000403303 A0A1W2PQY0 241 aa3.9□□□□□ -1.78
CCDC178-204ENST00000403303 TRBC2A0A5B9 178 aa3.9□□□□□ -1.78
CCDC178-204ENST00000403303 MEGF11A6BM72 1044 aa3.9□□□□□ -1.78
CCDC178-204ENST00000403303 KAT7O95251 611 aa3.9□□□□□ -1.78
CCDC178-204ENST00000403303 ZCCHC18P0CG32 403 aa3.9□□□□□ -1.78
CCDC178-204ENST00000403303 IFNAR1P17181 557 aa3.9□□□□□ -1.78
CCDC178-204ENST00000403303 ERCC2P18074 760 aa3.9□□□□□ -1.78
CCDC178-204ENST00000403303 GABRB1P18505 474 aa3.9□□□□□ -1.78
CCDC178-204ENST00000403303 SULT1E1P49888 294 aa3.9□□□□□ -1.78
CCDC178-204ENST00000403303 CSE1LP55060 971 aaKnown RBP3.9□□□□□ -1.78
CCDC178-204ENST00000403303 ITGA1P56199 1179 aa3.9□□□□□ -1.78
CCDC178-204ENST00000403303 HDAC4P56524 1084 aa3.9□□□□□ -1.78
CCDC178-204ENST00000403303 ARHGAP8P85298 464 aa3.9□□□□□ -1.78
CCDC178-204ENST00000403303 BEX3Q00994 111 aa3.9□□□□□ -1.78
CCDC178-204ENST00000403303 CCDC57Q2TAC2 916 aa3.9□□□□□ -1.78
CCDC178-204ENST00000403303 GBP6Q6ZN66 633 aa3.9□□□□□ -1.78
CCDC178-204ENST00000403303 BMP8AQ7Z5Y6 402 aa3.9□□□□□ -1.78
CCDC178-204ENST00000403303 SLC15A3Q8IY34 581 aa3.9□□□□□ -1.78
CCDC178-204ENST00000403303 OTUD6BQ8N6M0 293 aa3.9□□□□□ -1.78
CCDC178-204ENST00000403303 DCAF11Q8TEB1 546 aa3.9□□□□□ -1.78
CCDC178-204ENST00000403303 RNF139Q8WU17 664 aa3.9□□□□□ -1.78
CCDC178-204ENST00000403303 SELENOMQ8WWX9 145 aa3.9□□□□□ -1.78
CCDC178-204ENST00000403303 MISP3Q96FF7 219 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms