RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 CALR3Q96L12 384 aaKnown RBP19.5■□□□□ 0.71
RTN4-207ENST00000402434 CAPN10Q9HC96 672 aa19.5■□□□□ 0.71
RTN4-207ENST00000402434 RXFP3Q9NSD7 469 aa19.5■□□□□ 0.71
RTN4-207ENST00000402434 EIF2B4Q9UI10 523 aaKnown RBP19.5■□□□□ 0.71
RTN4-207ENST00000402434 TPX2Q9ULW0 747 aaKnown RBP19.5■□□□□ 0.71
RTN4-207ENST00000402434 LAMA1P25391 3075 aa19.5■□□□□ 0.71
RTN4-207ENST00000402434 LNP1A1A4G5 178 aa19.49■□□□□ 0.71
RTN4-207ENST00000402434 FAM47DPA6NHR8 397 aa19.49■□□□□ 0.71
RTN4-207ENST00000402434 PJA2O43164 708 aa19.49■□□□□ 0.71
RTN4-207ENST00000402434 MAFKO60675 156 aa19.49■□□□□ 0.71
RTN4-207ENST00000402434 GNSP15586 552 aa19.49■□□□□ 0.71
RTN4-207ENST00000402434 ITGB7P26010 798 aa19.49■□□□□ 0.71
RTN4-207ENST00000402434 GKP32189 559 aa19.49■□□□□ 0.71
RTN4-207ENST00000402434 CCR5P51681 352 aa19.49■□□□□ 0.71
RTN4-207ENST00000402434 VAV2P52735 878 aa19.49■□□□□ 0.71
RTN4-207ENST00000402434 TAS2R38P59533 333 aa19.49■□□□□ 0.71
RTN4-207ENST00000402434 RFTN1Q14699 578 aaPredicted RBP19.49■□□□□ 0.71
RTN4-207ENST00000402434 NCBP2-AS2Q69YL0 99 aa19.49■□□□□ 0.71
RTN4-207ENST00000402434 C11orf63Q6NUN7 778 aa19.49■□□□□ 0.71
RTN4-207ENST00000402434 ERN2Q76MJ5 926 aaKnown RBP19.49■□□□□ 0.71
RTN4-207ENST00000402434 PQLC3Q8N755 202 aa19.49■□□□□ 0.71
RTN4-207ENST00000402434 ACRBPQ8NEB7 543 aa19.49■□□□□ 0.71
RTN4-207ENST00000402434 OR6K2Q8NGY2 324 aa19.49■□□□□ 0.71
RTN4-207ENST00000402434 ZNF599Q96NL3 588 aa19.49■□□□□ 0.71
RTN4-207ENST00000402434 ORAI3Q9BRQ5 295 aa19.49■□□□□ 0.71
RTN4-207ENST00000402434 LACRTQ9GZZ8 138 aa19.49■□□□□ 0.71
RTN4-207ENST00000402434 ZDHHC6Q9H6R6 413 aa19.49■□□□□ 0.71
RTN4-207ENST00000402434 SP110Q9HB58 689 aa19.49■□□□□ 0.71
RTN4-207ENST00000402434 DYRK4Q9NR20 520 aa19.49■□□□□ 0.71
RTN4-207ENST00000402434 HYOU1Q9Y4L1 999 aa19.49■□□□□ 0.71
RTN4-207ENST00000402434 DUSP10Q9Y6W6 482 aa19.49■□□□□ 0.71
RTN4-207ENST00000402434 TBC1D3DA0A087WVF3 549 aa19.48■□□□□ 0.71
RTN4-207ENST00000402434 TBC1D3IA0A087WXS9 549 aa19.48■□□□□ 0.71
RTN4-207ENST00000402434 TBC1D3EA0A087X179 549 aa19.48■□□□□ 0.71
RTN4-207ENST00000402434 TBC1D3KA0A087X1G2 549 aa19.48■□□□□ 0.71
RTN4-207ENST00000402434 LRRD1A4D1F6 860 aa19.48■□□□□ 0.71
RTN4-207ENST00000402434 TBC1D3FA6NER0 549 aaPredicted RBP19.48■□□□□ 0.71
RTN4-207ENST00000402434 TBC1D3LB9A6J9 549 aa19.48■□□□□ 0.71
RTN4-207ENST00000402434 KRIT1O00522 736 aa19.48■□□□□ 0.71
RTN4-207ENST00000402434 SPOPO43791 374 aa19.48■□□□□ 0.71
RTN4-207ENST00000402434 GDF9O60383 454 aa19.48■□□□□ 0.71
RTN4-207ENST00000402434 PALMO75781 387 aa19.48■□□□□ 0.71
RTN4-207ENST00000402434 FSBPO95073 299 aa19.48■□□□□ 0.71
RTN4-207ENST00000402434 IGSF6O95976 241 aa19.48■□□□□ 0.71
RTN4-207ENST00000402434 PEX11BO96011 259 aa19.48■□□□□ 0.71
RTN4-207ENST00000402434 TBC1D3HP0C7X1 549 aa19.48■□□□□ 0.71
RTN4-207ENST00000402434 CD27P26842 260 aa19.48■□□□□ 0.71
RTN4-207ENST00000402434 RAD51Q06609 339 aa19.48■□□□□ 0.71
RTN4-207ENST00000402434 AASDHQ4L235 1098 aaPredicted RBP19.48■□□□□ 0.71
RTN4-207ENST00000402434 ZFYVE27Q5T4F4 411 aa19.48■□□□□ 0.71
RTN4-207ENST00000402434 TBC1D3GQ6DHY5 549 aa19.48■□□□□ 0.71
RTN4-207ENST00000402434 TBC1D3CQ6IPX1 549 aa19.48■□□□□ 0.71
RTN4-207ENST00000402434 TBC1D3Q8IZP1 549 aaPredicted RBP19.48■□□□□ 0.71
RTN4-207ENST00000402434 RYBPQ8N488 228 aaPredicted RBP19.48■□□□□ 0.71
RTN4-207ENST00000402434 TPCN2Q8NHX9 752 aa19.48■□□□□ 0.71
RTN4-207ENST00000402434 RNF157Q96PX1 679 aa19.48■□□□□ 0.71
RTN4-207ENST00000402434 NUSAP1Q9BXS6 441 aaKnown RBP19.48■□□□□ 0.71
RTN4-207ENST00000402434 OSBPL1AQ9BXW6 950 aa19.48■□□□□ 0.71
RTN4-207ENST00000402434 CPEB1Q9BZB8 566 aaKnown RBP19.48■□□□□ 0.71
RTN4-207ENST00000402434 GOLPH3Q9H4A6 298 aa19.48■□□□□ 0.71
RTN4-207ENST00000402434 DDX56Q9NY93 547 aaKnown RBP19.48■□□□□ 0.71
RTN4-207ENST00000402434 SLC6A14Q9UN76 642 aa19.48■□□□□ 0.71
RTN4-207ENST00000402434 A0A1B0GTW7 788 aa19.48■□□□□ 0.71
RTN4-207ENST00000402434 LATO43561 262 aa19.48■□□□□ 0.71
RTN4-207ENST00000402434 PSTPIP1O43586 416 aa19.48■□□□□ 0.71
RTN4-207ENST00000402434 CSNK1DP48730 415 aa19.48■□□□□ 0.71
RTN4-207ENST00000402434 NSUN2Q08J23 767 aaKnown RBP eCLIP19.48■□□□□ 0.71
RTN4-207ENST00000402434 ZNF805Q5CZA5 627 aa19.48■□□□□ 0.71
RTN4-207ENST00000402434 NEK5Q6P3R8 708 aa19.48■□□□□ 0.71
RTN4-207ENST00000402434 TSEN2Q8NCE0 465 aaKnown RBP19.48■□□□□ 0.71
RTN4-207ENST00000402434 PSKH2Q96QS6 385 aa19.48■□□□□ 0.71
RTN4-207ENST00000402434 PREBQ9HCU5 417 aa19.48■□□□□ 0.71
RTN4-207ENST00000402434 SLCO1B1Q9Y6L6 691 aa19.48■□□□□ 0.71
RTN4-207ENST00000402434 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.47■□□□□ 0.71
RTN4-207ENST00000402434 A0A1W2PPC4 97 aa19.47■□□□□ 0.71
RTN4-207ENST00000402434 BCAT2O15382 392 aaPredicted RBP19.47■□□□□ 0.71
RTN4-207ENST00000402434 MFSD11O43934 449 aa19.47■□□□□ 0.71
RTN4-207ENST00000402434 CFIP05156 583 aa19.47■□□□□ 0.71
RTN4-207ENST00000402434 NEK3P51956 506 aa19.47■□□□□ 0.71
RTN4-207ENST00000402434 LIMK1P53667 647 aa19.47■□□□□ 0.71
RTN4-207ENST00000402434 SLC10A7Q0GE19 358 aa19.47■□□□□ 0.71
RTN4-207ENST00000402434 GALNT2Q10471 571 aa19.47■□□□□ 0.71
RTN4-207ENST00000402434 TMCO4Q5TGY1 634 aa19.47■□□□□ 0.71
RTN4-207ENST00000402434 TRIM69Q86WT6 500 aa19.47■□□□□ 0.71
RTN4-207ENST00000402434 ZCCHC9Q8N567 271 aaKnown RBP19.47■□□□□ 0.71
RTN4-207ENST00000402434 ATPAF2Q8N5M1 289 aa19.47■□□□□ 0.71
RTN4-207ENST00000402434 NETO1Q8TDF5 533 aa19.47■□□□□ 0.71
RTN4-207ENST00000402434 SNX19Q92543 992 aa19.47■□□□□ 0.71
RTN4-207ENST00000402434 MIR1-1HGQ9H1L0 117 aa19.47■□□□□ 0.71
RTN4-207ENST00000402434 EBF2Q9HAK2 575 aa19.47■□□□□ 0.71
RTN4-207ENST00000402434 UGT2B4P06133 528 aa19.46■□□□□ 0.71
RTN4-207ENST00000402434 ADRB3P13945 408 aa19.46■□□□□ 0.71
RTN4-207ENST00000402434 SDHBP21912 280 aa19.46■□□□□ 0.71
RTN4-207ENST00000402434 GARSP41250 739 aaKnown RBP19.46■□□□□ 0.71
RTN4-207ENST00000402434 PPP2CBP62714 309 aa19.46■□□□□ 0.71
RTN4-207ENST00000402434 PPP2CAP67775 309 aa19.46■□□□□ 0.71
RTN4-207ENST00000402434 LBRQ14739 615 aaKnown RBP19.46■□□□□ 0.71
RTN4-207ENST00000402434 GRM3Q14832 879 aa19.46■□□□□ 0.71
RTN4-207ENST00000402434 TAZQ16635 292 aa19.46■□□□□ 0.71
RTN4-207ENST00000402434 FBXL19Q6PCT2 694 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms