RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 CDKL2Q92772 493 aa25.97■■□□□ 1.75
CPNE1-205ENST00000401607 SERAC1Q96JX3 654 aa25.97■■□□□ 1.75
CPNE1-205ENST00000401607 ZNF778Q96MU6 729 aa25.97■■□□□ 1.75
CPNE1-205ENST00000401607 PSKH2Q96QS6 385 aa25.97■■□□□ 1.75
CPNE1-205ENST00000401607 RABEP2Q9H5N1 569 aa25.97■■□□□ 1.75
CPNE1-205ENST00000401607 CERS4Q9HA82 394 aa25.97■■□□□ 1.75
CPNE1-205ENST00000401607 ATG2AQ2TAZ0 1938 aa25.97■■□□□ 1.75
CPNE1-205ENST00000401607 TRIM49D1C9J1S8 452 aa25.97■■□□□ 1.75
CPNE1-205ENST00000401607 XYLBO75191 536 aa25.97■■□□□ 1.75
CPNE1-205ENST00000401607 SNRPAP09012 282 aaKnown RBP25.97■■□□□ 1.75
CPNE1-205ENST00000401607 NAB1Q13506 487 aa25.97■■□□□ 1.75
CPNE1-205ENST00000401607 PKN3Q6P5Z2 889 aa25.97■■□□□ 1.75
CPNE1-205ENST00000401607 POTEHQ6S545 545 aa25.97■■□□□ 1.75
CPNE1-205ENST00000401607 SH2D5Q6ZV89 423 aa25.97■■□□□ 1.75
CPNE1-205ENST00000401607 RASSF3Q86WH2 238 aa25.97■■□□□ 1.75
CPNE1-205ENST00000401607 LEMD2Q8NC56 503 aa25.97■■□□□ 1.75
CPNE1-205ENST00000401607 BHMTQ93088 406 aa25.97■■□□□ 1.75
CPNE1-205ENST00000401607 KLF6Q99612 283 aaPredicted RBP25.97■■□□□ 1.75
CPNE1-205ENST00000401607 MLXIPLQ9NP71 852 aa25.97■■□□□ 1.75
CPNE1-205ENST00000401607 ZDHHC7Q9NXF8 308 aa25.97■■□□□ 1.75
CPNE1-205ENST00000401607 SMG5Q9UPR3 1016 aaKnown RBP25.97■■□□□ 1.75
CPNE1-205ENST00000401607 CHD7Q9P2D1 2997 aa25.96■■□□□ 1.75
CPNE1-205ENST00000401607 MIA3Q5JRA6 1907 aa25.96■■□□□ 1.75
CPNE1-205ENST00000401607 HMX2A2RU54 273 aa25.96■■□□□ 1.75
CPNE1-205ENST00000401607 ZMPSTE24O75844 475 aa25.96■■□□□ 1.75
CPNE1-205ENST00000401607 KRT37O76014 449 aa25.96■■□□□ 1.75
CPNE1-205ENST00000401607 MT-ND3P03897 115 aa25.96■■□□□ 1.75
CPNE1-205ENST00000401607 SLC18A1P54219 525 aa25.96■■□□□ 1.75
CPNE1-205ENST00000401607 CYTH1Q15438 398 aa25.96■■□□□ 1.75
CPNE1-205ENST00000401607 BBS5Q8N3I7 341 aa25.96■■□□□ 1.75
CPNE1-205ENST00000401607 SLC25A41Q8N5S1 370 aa25.96■■□□□ 1.75
CPNE1-205ENST00000401607 DENND1AQ8TEH3 1009 aa25.96■■□□□ 1.75
CPNE1-205ENST00000401607 ZNF707Q96C28 371 aaPredicted RBP25.96■■□□□ 1.75
CPNE1-205ENST00000401607 ALG14Q96F25 216 aa25.96■■□□□ 1.75
CPNE1-205ENST00000401607 FEM1AQ9BSK4 669 aa25.96■■□□□ 1.75
CPNE1-205ENST00000401607 CINPQ9BW66 212 aaPredicted RBP25.96■■□□□ 1.75
CPNE1-205ENST00000401607 PRKD2Q9BZL6 878 aa25.96■■□□□ 1.75
CPNE1-205ENST00000401607 SNAP91O60641 907 aa25.95■■□□□ 1.75
CPNE1-205ENST00000401607 CD160O95971 181 aa25.95■■□□□ 1.75
CPNE1-205ENST00000401607 AVPR1AP37288 418 aa25.95■■□□□ 1.75
CPNE1-205ENST00000401607 CSKP41240 450 aa25.95■■□□□ 1.75
CPNE1-205ENST00000401607 RGRP47804 291 aa25.95■■□□□ 1.75
CPNE1-205ENST00000401607 CDH18Q13634 790 aa25.95■■□□□ 1.75
CPNE1-205ENST00000401607 BMPR2Q13873 1038 aa25.95■■□□□ 1.75
CPNE1-205ENST00000401607 ARHGAP15Q53QZ3 475 aa25.95■■□□□ 1.75
CPNE1-205ENST00000401607 PACS1Q6VY07 963 aa25.95■■□□□ 1.75
CPNE1-205ENST00000401607 ZNF771Q7L3S4 317 aaPredicted RBP25.95■■□□□ 1.75
CPNE1-205ENST00000401607 GRASPQ7Z6J2 395 aaPredicted RBP25.95■■□□□ 1.75
CPNE1-205ENST00000401607 DDI1Q8WTU0 396 aa25.95■■□□□ 1.75
CPNE1-205ENST00000401607 USP13Q92995 863 aaPredicted RBP25.95■■□□□ 1.75
CPNE1-205ENST00000401607 CCDC134Q9H6E4 229 aa25.95■■□□□ 1.75
CPNE1-205ENST00000401607 NKIRAS1Q9NYS0 192 aa25.95■■□□□ 1.75
CPNE1-205ENST00000401607 TCAF1Q9Y4C2 921 aa25.95■■□□□ 1.75
CPNE1-205ENST00000401607 PSAT1Q9Y617 370 aa25.95■■□□□ 1.75
CPNE1-205ENST00000401607 LOC285095A0A1B0GVY8 99 aa25.95■■□□□ 1.74
CPNE1-205ENST00000401607 E2F8A0AVK6 867 aa25.95■■□□□ 1.74
CPNE1-205ENST00000401607 GOLGA8RI6L899 631 aa25.95■■□□□ 1.74
CPNE1-205ENST00000401607 POU2F2P09086 479 aa25.95■■□□□ 1.74
CPNE1-205ENST00000401607 SERPINB9P50453 376 aa25.95■■□□□ 1.74
CPNE1-205ENST00000401607 MSLNQ13421 630 aaPredicted RBP25.95■■□□□ 1.74
CPNE1-205ENST00000401607 SLC1A5Q15758 541 aa25.95■■□□□ 1.74
CPNE1-205ENST00000401607 MPPE1Q53F39 396 aa25.95■■□□□ 1.74
CPNE1-205ENST00000401607 LGSNQ5TDP6 509 aa25.95■■□□□ 1.74
CPNE1-205ENST00000401607 MFN1Q8IWA4 741 aa25.95■■□□□ 1.74
CPNE1-205ENST00000401607 BANPQ8N9N5 519 aa25.95■■□□□ 1.74
CPNE1-205ENST00000401607 PPHLN1Q8NEY8 458 aaKnown RBP25.95■■□□□ 1.74
CPNE1-205ENST00000401607 PTCD2Q8WV60 388 aaKnown RBP25.95■■□□□ 1.74
CPNE1-205ENST00000401607 MRM3Q9HC36 420 aaKnown RBP25.95■■□□□ 1.74
CPNE1-205ENST00000401607 ZFATQ9P243 1243 aa25.95■■□□□ 1.74
CPNE1-205ENST00000401607 MYO7AQ13402 2215 aa25.94■■□□□ 1.74
CPNE1-205ENST00000401607 CCDC195A0A1B0GUA6 201 aa25.94■■□□□ 1.74
CPNE1-205ENST00000401607 CCDC78A2IDD5 438 aa25.94■■□□□ 1.74
CPNE1-205ENST00000401607 KRT38O76015 456 aa25.94■■□□□ 1.74
CPNE1-205ENST00000401607 ATXN1LP0C7T5 689 aaKnown RBP25.94■■□□□ 1.74
CPNE1-205ENST00000401607 CR2P20023 1033 aa25.94■■□□□ 1.74
CPNE1-205ENST00000401607 MPP7Q5T2T1 576 aa25.94■■□□□ 1.74
CPNE1-205ENST00000401607 RNF43Q68DV7 783 aa25.94■■□□□ 1.74
CPNE1-205ENST00000401607 TPGS1Q6ZTW0 290 aa25.94■■□□□ 1.74
CPNE1-205ENST00000401607 NSMCE3Q96MG7 304 aa25.94■■□□□ 1.74
CPNE1-205ENST00000401607 PBX4Q9BYU1 374 aa25.94■■□□□ 1.74
CPNE1-205ENST00000401607 PRKAG3Q9UGI9 489 aa25.94■■□□□ 1.74
CPNE1-205ENST00000401607 CLEC4EQ9ULY5 219 aa25.94■■□□□ 1.74
CPNE1-205ENST00000401607 GMNCA6NCL1 334 aa25.93■■□□□ 1.74
CPNE1-205ENST00000401607 SOBPA7XYQ1 873 aa25.93■■□□□ 1.74
CPNE1-205ENST00000401607 RPA3P35244 121 aaPredicted RBP25.93■■□□□ 1.74
CPNE1-205ENST00000401607 WDR4P57081 412 aaKnown RBP25.93■■□□□ 1.74
CPNE1-205ENST00000401607 SLC18A2Q05940 514 aa25.93■■□□□ 1.74
CPNE1-205ENST00000401607 SIRPB2Q5JXA9 342 aa25.93■■□□□ 1.74
CPNE1-205ENST00000401607 LINGO4Q6UY18 593 aa25.93■■□□□ 1.74
CPNE1-205ENST00000401607 BCAS4Q8TDM0 211 aa25.93■■□□□ 1.74
CPNE1-205ENST00000401607 ALKBH8Q96BT7 664 aaKnown RBP25.93■■□□□ 1.74
CPNE1-205ENST00000401607 MTBPQ96DY7 904 aa25.93■■□□□ 1.74
CPNE1-205ENST00000401607 SGSM3Q96HU1 749 aa25.93■■□□□ 1.74
CPNE1-205ENST00000401607 HAUS2Q9NVX0 235 aa25.93■■□□□ 1.74
CPNE1-205ENST00000401607 PLK2Q9NYY3 685 aa25.93■■□□□ 1.74
CPNE1-205ENST00000401607 DPP7Q9UHL4 492 aa25.93■■□□□ 1.74
CPNE1-205ENST00000401607 VPS28Q9UK41 221 aa25.93■■□□□ 1.74
CPNE1-205ENST00000401607 CHD9Q3L8U1 2897 aa25.92■■□□□ 1.74
CPNE1-205ENST00000401607 PRAMEF12O95522 483 aa25.92■■□□□ 1.74
CPNE1-205ENST00000401607 CA4P22748 312 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms